Coexpression cluster: Cluster_71 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0016272 prefoldin complex 2.75% (3/109) 7.82 0.0 1.6e-05
GO:0006457 protein folding 3.67% (4/109) 5.82 1e-06 6e-05
GO:0032774 RNA biosynthetic process 4.59% (5/109) 4.08 1.2e-05 0.000379
GO:0032991 protein-containing complex 9.17% (10/109) 2.51 1.1e-05 0.000409
GO:0005667 transcription factor complex 2.75% (3/109) 6.09 1e-05 0.000471
GO:0051082 unfolded protein binding 2.75% (3/109) 5.82 1.8e-05 0.00049
GO:0016070 RNA metabolic process 7.34% (8/109) 2.95 1e-05 0.000615
GO:0006352 DNA-templated transcription, initiation 2.75% (3/109) 5.24 6.5e-05 0.00156
GO:0006367 transcription initiation from RNA polymerase II promoter 1.83% (2/109) 6.5 0.000191 0.00408
GO:0009059 macromolecule biosynthetic process 5.5% (6/109) 2.77 0.000258 0.004952
GO:0090575 RNA polymerase II transcription factor complex 1.83% (2/109) 6.02 0.000399 0.00639
GO:0044798 nuclear transcription factor complex 1.83% (2/109) 6.02 0.000399 0.00639
GO:0034654 nucleobase-containing compound biosynthetic process 5.5% (6/109) 2.53 0.000637 0.009406
GO:0090304 nucleic acid metabolic process 7.34% (8/109) 1.98 0.001017 0.013944
GO:0044271 cellular nitrogen compound biosynthetic process 6.42% (7/109) 2.13 0.001155 0.014778
GO:0018130 heterocycle biosynthetic process 5.5% (6/109) 2.29 0.001481 0.016725
GO:0019438 aromatic compound biosynthetic process 5.5% (6/109) 2.3 0.001454 0.017449
GO:1901362 organic cyclic compound biosynthetic process 5.5% (6/109) 2.23 0.001802 0.019217
GO:0044428 nuclear part 2.75% (3/109) 3.5 0.002382 0.024073
GO:0006139 nucleobase-containing compound metabolic process 8.26% (9/109) 1.62 0.00267 0.025628
GO:0034641 cellular nitrogen compound metabolic process 9.17% (10/109) 1.5 0.002938 0.026861
GO:0016072 rRNA metabolic process 1.83% (2/109) 4.5 0.00348 0.029053
GO:0006364 rRNA processing 1.83% (2/109) 4.5 0.00348 0.029053
GO:1901360 organic cyclic compound metabolic process 8.26% (9/109) 1.5 0.004627 0.030634
GO:0005575 cellular_component 11.01% (12/109) 1.25 0.004485 0.030756
GO:0006725 cellular aromatic compound metabolic process 8.26% (9/109) 1.52 0.004227 0.031217
GO:0008541 proteasome regulatory particle, lid subcomplex 0.92% (1/109) 7.82 0.004413 0.031378
GO:0046483 heterocycle metabolic process 8.26% (9/109) 1.53 0.004113 0.031587
GO:0044464 cell part 7.34% (8/109) 1.65 0.00408 0.03264
GO:0044451 nucleoplasm part 1.83% (2/109) 4.12 0.005851 0.037449
GO:0003682 chromatin binding 0.92% (1/109) 6.82 0.008806 0.041237
GO:0006166 purine ribonucleoside salvage 0.92% (1/109) 6.82 0.008806 0.041237
GO:0050483 IMP 5'-nucleotidase activity 0.92% (1/109) 6.82 0.008806 0.041237
GO:0005672 transcription factor TFIIA complex 0.92% (1/109) 6.82 0.008806 0.041237
GO:0046102 inosine metabolic process 0.92% (1/109) 6.82 0.008806 0.041237
GO:0046103 inosine biosynthetic process 0.92% (1/109) 6.82 0.008806 0.041237
GO:0006366 transcription by RNA polymerase II 0.92% (1/109) 6.82 0.008806 0.041237
GO:0006190 inosine salvage 0.92% (1/109) 6.82 0.008806 0.041237
GO:0043101 purine-containing compound salvage 0.92% (1/109) 6.82 0.008806 0.041237
GO:0044249 cellular biosynthetic process 6.42% (7/109) 1.67 0.006766 0.041907
GO:0050657 nucleic acid transport 0.92% (1/109) 6.24 0.01318 0.042176
GO:0051028 mRNA transport 0.92% (1/109) 6.24 0.01318 0.042176
GO:0005669 transcription factor TFIID complex 0.92% (1/109) 6.24 0.01318 0.042176
GO:0050658 RNA transport 0.92% (1/109) 6.24 0.01318 0.042176
GO:0046129 purine ribonucleoside biosynthetic process 0.92% (1/109) 6.24 0.01318 0.042176
GO:0042451 purine nucleoside biosynthetic process 0.92% (1/109) 6.24 0.01318 0.042176
GO:0006405 RNA export from nucleus 0.92% (1/109) 6.24 0.01318 0.042176
GO:0006406 mRNA export from nucleus 0.92% (1/109) 6.24 0.01318 0.042176
GO:0008253 5'-nucleotidase activity 0.92% (1/109) 6.24 0.01318 0.042176
GO:0008252 nucleotidase activity 0.92% (1/109) 6.24 0.01318 0.042176
GO:0051168 nuclear export 0.92% (1/109) 6.24 0.01318 0.042176
GO:0051236 establishment of RNA localization 0.92% (1/109) 6.24 0.01318 0.042176
GO:0005681 spliceosomal complex 0.92% (1/109) 6.24 0.01318 0.042176
GO:0009987 cellular process 14.68% (16/109) 0.87 0.013682 0.043065
GO:0044424 intracellular part 6.42% (7/109) 1.57 0.009528 0.043556
GO:1990904 ribonucleoprotein complex 2.75% (3/109) 2.77 0.009913 0.044264
GO:1901576 organic substance biosynthetic process 6.42% (7/109) 1.63 0.007662 0.045971
GO:0006396 RNA processing 2.75% (3/109) 2.71 0.011024 0.048104
GO:0009058 biosynthetic process 6.42% (7/109) 1.52 0.011391 0.048603
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Amborella trichopoda HCCA Cluster_159 0.02 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_187 0.023 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_242 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_103 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_252 0.026 Archaeplastida Compare
Zea mays HCCA Cluster_267 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_276 0.021 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_22 0.03 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_61 0.027 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_77 0.021 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_99 0.023 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_121 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_199 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_423 0.024 Archaeplastida Compare
Picea abies HCCA Cluster_526 0.031 Archaeplastida Compare
Oryza sativa HCCA Cluster_174 0.03 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_82 0.029 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_8 0.027 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_218 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_237 0.023 Archaeplastida Compare
Vitis vinifera HCCA Cluster_87 0.023 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_4 0.02 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_25 0.04 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_60 0.02 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_103 0.022 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_121 0.022 Archaeplastida Compare
Sequences (109) (download table)

InterPro Domains

GO Terms

Family Terms