Coexpression cluster: Cluster_116 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003676 nucleic acid binding 17.39% (36/207) 2.42 0.0 0.0
GO:1901363 heterocyclic compound binding 26.09% (54/207) 1.47 0.0 0.0
GO:0097159 organic cyclic compound binding 26.09% (54/207) 1.47 0.0 0.0
GO:0003723 RNA binding 6.76% (14/207) 3.39 0.0 0.0
GO:0005488 binding 35.27% (73/207) 1.05 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 11.59% (24/207) 2.16 0.0 0.0
GO:0034645 cellular macromolecule biosynthetic process 6.76% (14/207) 2.98 0.0 0.0
GO:0009059 macromolecule biosynthetic process 6.76% (14/207) 2.82 0.0 1e-06
GO:0003674 molecular_function 44.93% (93/207) 0.7 0.0 3e-06
GO:0044249 cellular biosynthetic process 8.21% (17/207) 2.12 0.0 1.9e-05
GO:0035639 purine ribonucleoside triphosphate binding 12.08% (25/207) 1.61 1e-06 2.9e-05
GO:1901576 organic substance biosynthetic process 8.21% (17/207) 2.05 1e-06 3.2e-05
GO:0044444 cytoplasmic part 5.31% (11/207) 2.58 3e-06 8.3e-05
GO:0044424 intracellular part 8.21% (17/207) 1.93 3e-06 8.5e-05
GO:0009058 biosynthetic process 8.21% (17/207) 1.91 4e-06 9.3e-05
GO:0016070 RNA metabolic process 4.83% (10/207) 2.67 5e-06 0.000109
GO:0005524 ATP binding 10.63% (22/207) 1.6 4e-06 0.00011
GO:0006412 translation 3.86% (8/207) 3.06 6e-06 0.00013
GO:0043043 peptide biosynthetic process 3.86% (8/207) 3.04 7e-06 0.000131
GO:0003735 structural constituent of ribosome 3.86% (8/207) 3.04 7e-06 0.000131
GO:0006518 peptide metabolic process 3.86% (8/207) 3.0 8e-06 0.000137
GO:0043226 organelle 5.31% (11/207) 2.42 8e-06 0.000138
GO:0017076 purine nucleotide binding 12.08% (25/207) 1.4 1.1e-05 0.000139
GO:0043229 intracellular organelle 5.31% (11/207) 2.42 8e-06 0.000141
GO:0008144 drug binding 10.63% (22/207) 1.52 1.1e-05 0.000141
GO:0044464 cell part 8.21% (17/207) 1.83 8e-06 0.000143
GO:0032555 purine ribonucleotide binding 12.08% (25/207) 1.4 1e-05 0.000143
GO:0043604 amide biosynthetic process 3.86% (8/207) 2.96 1e-05 0.000145
GO:0005198 structural molecule activity 3.86% (8/207) 2.92 1.2e-05 0.000147
GO:0006725 cellular aromatic compound metabolic process 7.73% (16/207) 1.84 1.2e-05 0.000149
GO:1901566 organonitrogen compound biosynthetic process 5.31% (11/207) 2.39 1e-05 0.000149
GO:0046483 heterocycle metabolic process 7.73% (16/207) 1.87 1e-05 0.00015
GO:0032553 ribonucleotide binding 12.08% (25/207) 1.39 1.2e-05 0.000151
GO:0043603 cellular amide metabolic process 3.86% (8/207) 2.91 1.3e-05 0.000152
GO:0097367 carbohydrate derivative binding 12.08% (25/207) 1.37 1.4e-05 0.000153
GO:1901360 organic cyclic compound metabolic process 7.73% (16/207) 1.81 1.6e-05 0.000173
GO:0006139 nucleobase-containing compound metabolic process 7.25% (15/207) 1.89 1.6e-05 0.000174
GO:1901265 nucleoside phosphate binding 12.56% (26/207) 1.32 1.8e-05 0.000179
GO:0000166 nucleotide binding 12.56% (26/207) 1.32 1.8e-05 0.000179
GO:0090304 nucleic acid metabolic process 6.28% (13/207) 2.05 2e-05 0.000191
GO:0043170 macromolecule metabolic process 14.01% (29/207) 1.2 2.5e-05 0.000241
GO:0036094 small molecule binding 12.56% (26/207) 1.26 3.5e-05 0.000329
GO:0005840 ribosome 3.38% (7/207) 2.92 4.3e-05 0.000388
GO:0006807 nitrogen compound metabolic process 14.49% (30/207) 1.12 5.4e-05 0.000457
GO:0032559 adenyl ribonucleotide binding 10.63% (22/207) 1.36 5.3e-05 0.000465
GO:0030554 adenyl nucleotide binding 10.63% (22/207) 1.36 5.4e-05 0.000467
GO:0004386 helicase activity 1.93% (4/207) 4.18 7.1e-05 0.00059
GO:0034660 ncRNA metabolic process 2.42% (5/207) 3.54 7.5e-05 0.000613
GO:0043168 anion binding 12.08% (25/207) 1.22 8.2e-05 0.000636
GO:0003678 DNA helicase activity 1.45% (3/207) 5.14 8e-05 0.000637
GO:0043228 non-membrane-bounded organelle 3.38% (7/207) 2.74 9.5e-05 0.000715
GO:0043232 intracellular non-membrane-bounded organelle 3.38% (7/207) 2.74 9.5e-05 0.000715
GO:1990904 ribonucleoprotein complex 3.38% (7/207) 2.7 0.000114 0.000836
GO:0044237 cellular metabolic process 14.98% (31/207) 1.03 0.000117 0.000844
GO:0044271 cellular nitrogen compound biosynthetic process 4.83% (10/207) 2.07 0.000154 0.001094
GO:0140101 catalytic activity, acting on a tRNA 1.93% (4/207) 3.66 0.000289 0.002016
GO:0032991 protein-containing complex 5.31% (11/207) 1.83 0.000311 0.002126
GO:0006399 tRNA metabolic process 1.93% (4/207) 3.62 0.000326 0.002195
GO:0006260 DNA replication 1.45% (3/207) 4.42 0.00037 0.002407
GO:0006414 translational elongation 0.97% (2/207) 6.06 0.00037 0.002445
GO:0140098 catalytic activity, acting on RNA 3.38% (7/207) 2.38 0.000444 0.002836
GO:0044429 mitochondrial part 1.45% (3/207) 4.32 0.000456 0.002866
GO:0071704 organic substance metabolic process 15.94% (33/207) 0.88 0.000498 0.003084
GO:0006520 cellular amino acid metabolic process 2.42% (5/207) 2.81 0.000774 0.004716
GO:0008168 methyltransferase activity 2.9% (6/207) 2.47 0.00081 0.004861
GO:0003746 translation elongation factor activity 0.97% (2/207) 5.47 0.000879 0.004968
GO:0031968 organelle outer membrane 0.97% (2/207) 5.47 0.000879 0.004968
GO:0005741 mitochondrial outer membrane 0.97% (2/207) 5.47 0.000879 0.004968
GO:0098805 whole membrane 0.97% (2/207) 5.47 0.000879 0.004968
GO:0044238 primary metabolic process 14.98% (31/207) 0.85 0.001012 0.005558
GO:0016741 transferase activity, transferring one-carbon groups 2.9% (6/207) 2.41 0.001 0.005573
GO:0004812 aminoacyl-tRNA ligase activity 1.45% (3/207) 3.9 0.001069 0.00571
GO:0016875 ligase activity, forming carbon-oxygen bonds 1.45% (3/207) 3.9 0.001069 0.00571
GO:0043039 tRNA aminoacylation 1.45% (3/207) 3.87 0.001149 0.005974
GO:0043038 amino acid activation 1.45% (3/207) 3.87 0.001149 0.005974
GO:0009987 cellular process 15.46% (32/207) 0.81 0.00137 0.007031
GO:0008135 translation factor activity, RNA binding 1.45% (3/207) 3.73 0.001507 0.007633
GO:0016592 mediator complex 0.97% (2/207) 5.06 0.001596 0.007779
GO:0006357 regulation of transcription by RNA polymerase II 0.97% (2/207) 5.06 0.001596 0.007779
GO:0098588 bounding membrane of organelle 0.97% (2/207) 5.06 0.001596 0.007779
GO:0140097 catalytic activity, acting on DNA 1.45% (3/207) 3.67 0.001709 0.008231
GO:0019867 outer membrane 0.97% (2/207) 4.83 0.002186 0.010395
GO:0031966 mitochondrial membrane 0.97% (2/207) 4.73 0.002514 0.01181
GO:0006396 RNA processing 1.93% (4/207) 2.71 0.003394 0.015756
GO:0031090 organelle membrane 0.97% (2/207) 4.47 0.003627 0.016639
GO:0044422 organelle part 2.9% (6/207) 1.97 0.004552 0.020404
GO:0044446 intracellular organelle part 2.9% (6/207) 1.97 0.004552 0.020404
GO:0006432 phenylalanyl-tRNA aminoacylation 0.48% (1/207) 7.64 0.005011 0.021014
GO:0004826 phenylalanine-tRNA ligase activity 0.48% (1/207) 7.64 0.005011 0.021014
GO:0008565 protein transporter activity 0.48% (1/207) 7.64 0.005011 0.021014
GO:0003724 RNA helicase activity 0.48% (1/207) 7.64 0.005011 0.021014
GO:0043138 3'-5' DNA helicase activity 0.48% (1/207) 7.64 0.005011 0.021014
GO:0032977 membrane insertase activity 0.48% (1/207) 7.64 0.005011 0.021014
GO:1901564 organonitrogen compound metabolic process 9.66% (20/207) 0.89 0.005869 0.024349
GO:0005515 protein binding 9.18% (19/207) 0.92 0.006158 0.025278
GO:0003712 transcription coregulator activity 0.97% (2/207) 4.0 0.006949 0.02823
GO:0008757 S-adenosylmethionine-dependent methyltransferase activity 0.97% (2/207) 3.78 0.009282 0.037318
GO:0005634 nucleus 1.93% (4/207) 2.26 0.010154 0.039208
GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase 0.48% (1/207) 6.64 0.009997 0.039382
GO:0016817 hydrolase activity, acting on acid anhydrides 3.38% (7/207) 1.57 0.010105 0.039409
GO:0009451 RNA modification 0.97% (2/207) 3.73 0.009912 0.039446
GO:0016874 ligase activity 1.45% (3/207) 2.7 0.011232 0.042529
GO:0044451 nucleoplasm part 0.97% (2/207) 3.64 0.011228 0.042932
GO:0044281 small molecule metabolic process 3.38% (7/207) 1.53 0.011477 0.043041
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_17 0.024 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_38 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_39 0.072 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_40 0.023 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_58 0.021 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_76 0.024 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_80 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_101 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_109 0.023 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_122 0.032 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_134 0.04 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_139 0.03 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_145 0.033 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_160 0.026 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_166 0.04 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_168 0.024 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_183 0.063 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_221 0.038 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_228 0.043 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_252 0.035 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_22 0.02 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_27 0.031 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_67 0.024 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_89 0.024 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_129 0.038 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_140 0.02 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_144 0.023 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_164 0.02 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_185 0.022 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_194 0.036 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_196 0.04 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_203 0.023 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_228 0.02 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_233 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_235 0.033 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_245 0.022 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_249 0.036 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_255 0.027 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_269 0.023 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_40 0.019 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_73 0.022 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_91 0.023 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_136 0.02 Archaeplastida Compare
Gingko biloba HCCA Cluster_4 0.02 Archaeplastida Compare
Gingko biloba HCCA Cluster_131 0.024 Archaeplastida Compare
Gingko biloba HCCA Cluster_175 0.029 Archaeplastida Compare
Gingko biloba HCCA Cluster_314 0.024 Archaeplastida Compare
Gingko biloba HCCA Cluster_337 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_6 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_7 0.064 Archaeplastida Compare
Zea mays HCCA Cluster_12 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_56 0.057 Archaeplastida Compare
Zea mays HCCA Cluster_81 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_103 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_106 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_110 0.026 Archaeplastida Compare
Zea mays HCCA Cluster_137 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_181 0.03 Archaeplastida Compare
Zea mays HCCA Cluster_199 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_201 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_216 0.059 Archaeplastida Compare
Zea mays HCCA Cluster_234 0.026 Archaeplastida Compare
Zea mays HCCA Cluster_250 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_261 0.04 Archaeplastida Compare
Zea mays HCCA Cluster_275 0.024 Archaeplastida Compare
Zea mays HCCA Cluster_276 0.025 Archaeplastida Compare
Zea mays HCCA Cluster_283 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_290 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_353 0.026 Archaeplastida Compare
Zea mays HCCA Cluster_358 0.024 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_16 0.045 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_24 0.038 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_36 0.024 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_84 0.029 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_85 0.02 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_110 0.032 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_116 0.027 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_160 0.028 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_11 0.033 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_19 0.045 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_95 0.033 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_114 0.036 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_155 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_167 0.051 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_186 0.034 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_244 0.044 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_248 0.029 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_290 0.025 Archaeplastida Compare
Picea abies HCCA Cluster_84 0.118 Archaeplastida Compare
Picea abies HCCA Cluster_261 0.025 Archaeplastida Compare
Picea abies HCCA Cluster_289 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_321 0.062 Archaeplastida Compare
Picea abies HCCA Cluster_339 0.025 Archaeplastida Compare
Picea abies HCCA Cluster_364 0.024 Archaeplastida Compare
Picea abies HCCA Cluster_393 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_403 0.03 Archaeplastida Compare
Picea abies HCCA Cluster_427 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_434 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_451 0.029 Archaeplastida Compare
Picea abies HCCA Cluster_470 0.03 Archaeplastida Compare
Picea abies HCCA Cluster_486 0.03 Archaeplastida Compare
Picea abies HCCA Cluster_492 0.025 Archaeplastida Compare
Picea abies HCCA Cluster_495 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_496 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_498 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_519 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_520 0.038 Archaeplastida Compare
Oryza sativa HCCA Cluster_21 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_40 0.03 Archaeplastida Compare
Oryza sativa HCCA Cluster_94 0.138 Archaeplastida Compare
Oryza sativa HCCA Cluster_96 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_140 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_141 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_191 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_254 0.037 Archaeplastida Compare
Oryza sativa HCCA Cluster_269 0.027 Archaeplastida Compare
Oryza sativa HCCA Cluster_297 0.025 Archaeplastida Compare
Oryza sativa HCCA Cluster_316 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_336 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_346 0.024 Archaeplastida Compare
Oryza sativa HCCA Cluster_347 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_357 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_3 0.044 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_25 0.02 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_36 0.022 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_75 0.04 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_108 0.022 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_109 0.02 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_137 0.022 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_8 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_26 0.041 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_35 0.023 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_77 0.024 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_105 0.091 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_131 0.047 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_173 0.035 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_202 0.036 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_207 0.038 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_209 0.044 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_217 0.03 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_223 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_251 0.032 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_253 0.027 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_260 0.024 Archaeplastida Compare
Vitis vinifera HCCA Cluster_22 0.027 Archaeplastida Compare
Vitis vinifera HCCA Cluster_26 0.024 Archaeplastida Compare
Vitis vinifera HCCA Cluster_35 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_44 0.071 Archaeplastida Compare
Vitis vinifera HCCA Cluster_60 0.047 Archaeplastida Compare
Vitis vinifera HCCA Cluster_121 0.038 Archaeplastida Compare
Vitis vinifera HCCA Cluster_123 0.047 Archaeplastida Compare
Vitis vinifera HCCA Cluster_152 0.03 Archaeplastida Compare
Vitis vinifera HCCA Cluster_154 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_172 0.037 Archaeplastida Compare
Vitis vinifera HCCA Cluster_181 0.022 Archaeplastida Compare
Vitis vinifera HCCA Cluster_197 0.049 Archaeplastida Compare
Vitis vinifera HCCA Cluster_201 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_221 0.024 Archaeplastida Compare
Vitis vinifera HCCA Cluster_236 0.032 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_17 0.03 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_21 0.028 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_22 0.022 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_56 0.03 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_60 0.034 Archaeplastida Compare
Sequences (207) (download table)

InterPro Domains

GO Terms

Family Terms