Coexpression cluster: Cluster_149 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0009507 chloroplast 69.62% (55/79) 2.36 0.0 0.0
GO:0009536 plastid 69.62% (55/79) 2.33 0.0 0.0
GO:0016070 RNA metabolic process 46.84% (37/79) 3.22 0.0 0.0
GO:0090304 nucleic acid metabolic process 49.37% (39/79) 2.77 0.0 0.0
GO:0009658 chloroplast organization 22.78% (18/79) 4.75 0.0 0.0
GO:0034660 ncRNA metabolic process 25.32% (20/79) 4.33 0.0 0.0
GO:0006139 nucleobase-containing compound metabolic process 50.63% (40/79) 2.41 0.0 0.0
GO:0044444 cytoplasmic part 84.81% (67/79) 1.29 0.0 0.0
GO:0006725 cellular aromatic compound metabolic process 54.43% (43/79) 2.18 0.0 0.0
GO:0046483 heterocycle metabolic process 51.9% (41/79) 2.25 0.0 0.0
GO:0009657 plastid organization 22.78% (18/79) 4.38 0.0 0.0
GO:1901360 organic cyclic compound metabolic process 54.43% (43/79) 2.11 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 51.9% (41/79) 2.16 0.0 0.0
GO:0006399 tRNA metabolic process 16.46% (13/79) 5.4 0.0 0.0
GO:0061024 membrane organization 17.72% (14/79) 4.54 0.0 0.0
GO:0006807 nitrogen compound metabolic process 59.49% (47/79) 1.62 0.0 0.0
GO:0043170 macromolecule metabolic process 55.7% (44/79) 1.71 0.0 0.0
GO:0044237 cellular metabolic process 67.09% (53/79) 1.39 0.0 0.0
GO:0009668 plastid membrane organization 16.46% (13/79) 4.53 0.0 0.0
GO:0010027 thylakoid membrane organization 16.46% (13/79) 4.53 0.0 0.0
GO:0006396 RNA processing 25.32% (20/79) 3.16 0.0 0.0
GO:0009793 embryo development ending in seed dormancy 21.52% (17/79) 3.49 0.0 0.0
GO:0009790 embryo development 21.52% (17/79) 3.49 0.0 0.0
GO:0016226 iron-sulfur cluster assembly 12.66% (10/79) 5.14 0.0 0.0
GO:0031163 metallo-sulfur cluster assembly 12.66% (10/79) 5.14 0.0 0.0
GO:0008152 metabolic process 68.35% (54/79) 1.25 0.0 0.0
GO:0034470 ncRNA processing 16.46% (13/79) 4.09 0.0 0.0
GO:0016556 mRNA modification 12.66% (10/79) 4.93 0.0 0.0
GO:0071840 cellular component organization or biogenesis 41.77% (33/79) 1.95 0.0 0.0
GO:0044238 primary metabolic process 60.76% (48/79) 1.37 0.0 0.0
GO:0006364 rRNA processing 15.19% (12/79) 4.17 0.0 0.0
GO:0044435 plastid part 27.85% (22/79) 2.63 0.0 0.0
GO:0016072 rRNA metabolic process 15.19% (12/79) 4.15 0.0 0.0
GO:0009451 RNA modification 16.46% (13/79) 3.81 0.0 0.0
GO:0009987 cellular process 72.15% (57/79) 1.04 0.0 0.0
GO:0042793 plastid transcription 10.13% (8/79) 5.3 0.0 0.0
GO:0072598 protein localization to chloroplast 10.13% (8/79) 5.3 0.0 0.0
GO:0072596 establishment of protein localization to chloroplast 10.13% (8/79) 5.3 0.0 0.0
GO:0045036 protein targeting to chloroplast 10.13% (8/79) 5.3 0.0 0.0
GO:0071704 organic substance metabolic process 62.03% (49/79) 1.22 0.0 0.0
GO:0016043 cellular component organization 37.97% (30/79) 1.92 0.0 0.0
GO:0140098 catalytic activity, acting on RNA 13.92% (11/79) 4.02 0.0 0.0
GO:0019682 glyceraldehyde-3-phosphate metabolic process 15.19% (12/79) 3.67 0.0 0.0
GO:0031425 chloroplast RNA processing 6.33% (5/79) 7.07 0.0 0.0
GO:0016071 mRNA metabolic process 15.19% (12/79) 3.6 0.0 0.0
GO:0007275 multicellular organism development 21.52% (17/79) 2.76 0.0 0.0
GO:0051667 establishment of plastid localization 10.13% (8/79) 4.76 0.0 0.0
GO:0009902 chloroplast relocation 10.13% (8/79) 4.76 0.0 0.0
GO:0019750 chloroplast localization 10.13% (8/79) 4.75 0.0 0.0
GO:0051644 plastid localization 10.13% (8/79) 4.75 0.0 0.0
GO:0051656 establishment of organelle localization 10.13% (8/79) 4.72 0.0 0.0
GO:0044434 chloroplast part 24.05% (19/79) 2.46 0.0 0.0
GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway 12.66% (10/79) 3.94 0.0 0.0
GO:0046490 isopentenyl diphosphate metabolic process 12.66% (10/79) 3.92 0.0 0.0
GO:0009240 isopentenyl diphosphate biosynthetic process 12.66% (10/79) 3.92 0.0 0.0
GO:0006996 organelle organization 24.05% (19/79) 2.38 0.0 0.0
GO:0006081 cellular aldehyde metabolic process 15.19% (12/79) 3.3 0.0 0.0
GO:0048856 anatomical structure development 27.85% (22/79) 2.09 0.0 0.0
GO:0051186 cofactor metabolic process 20.25% (16/79) 2.6 0.0 0.0
GO:0000023 maltose metabolic process 10.13% (8/79) 4.2 0.0 0.0
GO:0008654 phospholipid biosynthetic process 13.92% (11/79) 3.32 0.0 0.0
GO:0034645 cellular macromolecule biosynthetic process 22.78% (18/79) 2.3 0.0 0.0
GO:0006644 phospholipid metabolic process 13.92% (11/79) 3.24 0.0 0.0
GO:0006655 phosphatidylglycerol biosynthetic process 7.59% (6/79) 5.06 0.0 0.0
GO:0046471 phosphatidylglycerol metabolic process 7.59% (6/79) 5.04 0.0 0.0
GO:0003006 developmental process involved in reproduction 26.58% (21/79) 1.98 0.0 0.0
GO:0097659 nucleic acid-templated transcription 10.13% (8/79) 3.99 0.0 0.0
GO:0051640 organelle localization 10.13% (8/79) 3.99 0.0 0.0
GO:0006351 transcription, DNA-templated 10.13% (8/79) 3.99 0.0 0.0
GO:0019252 starch biosynthetic process 10.13% (8/79) 3.9 0.0 1e-06
GO:0006082 organic acid metabolic process 26.58% (21/79) 1.93 0.0 1e-06
GO:0043436 oxoacid metabolic process 26.58% (21/79) 1.93 0.0 1e-06
GO:0140101 catalytic activity, acting on a tRNA 7.59% (6/79) 4.79 0.0 1e-06
GO:0005984 disaccharide metabolic process 10.13% (8/79) 3.86 0.0 1e-06
GO:1901259 chloroplast rRNA processing 3.8% (3/79) 8.04 0.0 1e-06
GO:0006790 sulfur compound metabolic process 16.46% (13/79) 2.69 0.0 1e-06
GO:0044249 cellular biosynthetic process 36.71% (29/79) 1.48 0.0 1e-06
GO:0009532 plastid stroma 15.19% (12/79) 2.83 0.0 1e-06
GO:0009570 chloroplast stroma 15.19% (12/79) 2.83 0.0 1e-06
GO:0009059 macromolecule biosynthetic process 22.78% (18/79) 2.11 0.0 1e-06
GO:0009250 glucan biosynthetic process 11.39% (9/79) 3.48 0.0 1e-06
GO:0009311 oligosaccharide metabolic process 10.13% (8/79) 3.74 0.0 1e-06
GO:0006418 tRNA aminoacylation for protein translation 6.33% (5/79) 5.22 0.0 2e-06
GO:0043039 tRNA aminoacylation 6.33% (5/79) 5.22 0.0 2e-06
GO:0043038 amino acid activation 6.33% (5/79) 5.22 0.0 2e-06
GO:0005982 starch metabolic process 10.13% (8/79) 3.63 0.0 2e-06
GO:0006090 pyruvate metabolic process 12.66% (10/79) 3.08 0.0 2e-06
GO:0051649 establishment of localization in cell 18.99% (15/79) 2.23 1e-06 5e-06
GO:1901576 organic substance biosynthetic process 36.71% (29/79) 1.35 1e-06 6e-06
GO:0019752 carboxylic acid metabolic process 24.05% (19/79) 1.86 1e-06 6e-06
GO:0022414 reproductive process 26.58% (21/79) 1.72 1e-06 6e-06
GO:0044042 glucan metabolic process 11.39% (9/79) 3.08 1e-06 9e-06
GO:0006073 cellular glucan metabolic process 11.39% (9/79) 3.08 1e-06 9e-06
GO:0009058 biosynthetic process 36.71% (29/79) 1.31 1e-06 1e-05
GO:0043231 intracellular membrane-bounded organelle 84.81% (67/79) 0.5 2e-06 1.2e-05
GO:0043227 membrane-bounded organelle 84.81% (67/79) 0.5 2e-06 1.3e-05
GO:0051641 cellular localization 18.99% (15/79) 2.1 2e-06 1.3e-05
GO:0032774 RNA biosynthetic process 10.13% (8/79) 3.21 2e-06 1.8e-05
GO:1901135 carbohydrate derivative metabolic process 17.72% (14/79) 2.16 3e-06 1.9e-05
GO:0043229 intracellular organelle 84.81% (67/79) 0.48 3e-06 2.1e-05
GO:0043226 organelle 84.81% (67/79) 0.48 3e-06 2.1e-05
GO:0032501 multicellular organismal process 22.78% (18/79) 1.78 3e-06 2.4e-05
GO:0000373 Group II intron splicing 3.8% (3/79) 6.58 4e-06 2.6e-05
GO:0008610 lipid biosynthetic process 16.46% (13/79) 2.21 4e-06 2.8e-05
GO:0044281 small molecule metabolic process 27.85% (22/79) 1.51 5e-06 3.2e-05
GO:0048481 plant ovule development 7.59% (6/79) 3.8 5e-06 3.3e-05
GO:0022607 cellular component assembly 13.92% (11/79) 2.41 7e-06 4.5e-05
GO:0032502 developmental process 31.65% (25/79) 1.33 7e-06 4.9e-05
GO:0017111 nucleoside-triphosphatase activity 12.66% (10/79) 2.55 8e-06 5.2e-05
GO:0016874 ligase activity 7.59% (6/79) 3.67 8e-06 5.3e-05
GO:0033692 cellular polysaccharide biosynthetic process 11.39% (9/79) 2.73 9e-06 5.6e-05
GO:0004812 aminoacyl-tRNA ligase activity 5.06% (4/79) 4.9 1e-05 6.5e-05
GO:0016875 ligase activity, forming carbon-oxygen bonds 5.06% (4/79) 4.9 1e-05 6.5e-05
GO:0008150 biological_process 93.67% (74/79) 0.33 1.1e-05 7e-05
GO:0009295 nucleoid 5.06% (4/79) 4.87 1.1e-05 7e-05
GO:0046474 glycerophospholipid biosynthetic process 7.59% (6/79) 3.59 1.1e-05 7e-05
GO:0016462 pyrophosphatase activity 12.66% (10/79) 2.48 1.2e-05 7.3e-05
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 12.66% (10/79) 2.48 1.2e-05 7.4e-05
GO:0016817 hydrolase activity, acting on acid anhydrides 12.66% (10/79) 2.47 1.3e-05 7.7e-05
GO:0034637 cellular carbohydrate biosynthetic process 11.39% (9/79) 2.63 1.5e-05 9.1e-05
GO:0006650 glycerophospholipid metabolic process 7.59% (6/79) 3.5 1.6e-05 9.5e-05
GO:0045017 glycerolipid biosynthetic process 7.59% (6/79) 3.47 1.8e-05 0.000106
GO:0019637 organophosphate metabolic process 16.46% (13/79) 1.99 2e-05 0.00012
GO:0004519 endonuclease activity 5.06% (4/79) 4.62 2.2e-05 0.000127
GO:0044255 cellular lipid metabolic process 16.46% (13/79) 1.98 2.3e-05 0.000133
GO:0010239 chloroplast mRNA processing 2.53% (2/79) 7.87 2.4e-05 0.000136
GO:1903725 regulation of phospholipid metabolic process 2.53% (2/79) 7.87 2.4e-05 0.000136
GO:0010322 regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway 2.53% (2/79) 7.87 2.4e-05 0.000136
GO:0071071 regulation of phospholipid biosynthetic process 2.53% (2/79) 7.87 2.4e-05 0.000136
GO:0044424 intracellular part 89.87% (71/79) 0.36 2.7e-05 0.000152
GO:0046486 glycerolipid metabolic process 7.59% (6/79) 3.35 2.8e-05 0.000156
GO:0005739 mitochondrion 29.11% (23/79) 1.29 3.2e-05 0.000175
GO:0000271 polysaccharide biosynthetic process 11.39% (9/79) 2.48 3.3e-05 0.000179
GO:0044264 cellular polysaccharide metabolic process 11.39% (9/79) 2.48 3.3e-05 0.00018
GO:0044446 intracellular organelle part 27.85% (22/79) 1.31 3.9e-05 0.000211
GO:0044422 organelle part 27.85% (22/79) 1.31 4e-05 0.000217
GO:0007005 mitochondrion organization 3.8% (3/79) 5.45 4.3e-05 0.000229
GO:0019438 aromatic compound biosynthetic process 17.72% (14/79) 1.79 4.3e-05 0.00023
GO:0004518 nuclease activity 6.33% (5/79) 3.69 4.5e-05 0.000235
GO:0006424 glutamyl-tRNA aminoacylation 2.53% (2/79) 7.45 4.8e-05 0.00025
GO:0004386 helicase activity 6.33% (5/79) 3.65 5e-05 0.000258
GO:0090407 organophosphate biosynthetic process 13.92% (11/79) 2.08 5.5e-05 0.00028
GO:0072594 establishment of protein localization to organelle 10.13% (8/79) 2.58 5.7e-05 0.00029
GO:0004540 ribonuclease activity 5.06% (4/79) 4.26 5.8e-05 0.000292
GO:0033365 protein localization to organelle 10.13% (8/79) 2.57 6e-05 0.000299
GO:0010628 positive regulation of gene expression 10.13% (8/79) 2.56 6.4e-05 0.00032
GO:0010557 positive regulation of macromolecule biosynthetic process 10.13% (8/79) 2.55 6.7e-05 0.000332
GO:0031328 positive regulation of cellular biosynthetic process 10.13% (8/79) 2.53 7.4e-05 0.000364
GO:0031897 Tic complex 2.53% (2/79) 7.13 8e-05 0.000391
GO:0044464 cell part 93.67% (74/79) 0.28 8.3e-05 0.000401
GO:0051173 positive regulation of nitrogen compound metabolic process 10.13% (8/79) 2.5 8.5e-05 0.000412
GO:0044262 cellular carbohydrate metabolic process 11.39% (9/79) 2.29 9.1e-05 0.000435
GO:0010604 positive regulation of macromolecule metabolic process 10.13% (8/79) 2.48 9.4e-05 0.000448
GO:0031325 positive regulation of cellular metabolic process 10.13% (8/79) 2.46 0.000104 0.000489
GO:0005976 polysaccharide metabolic process 11.39% (9/79) 2.26 0.000107 0.000502
GO:0006629 lipid metabolic process 16.46% (13/79) 1.74 0.000119 0.000553
GO:0006520 cellular amino acid metabolic process 11.39% (9/79) 2.23 0.000124 0.000574
GO:0043412 macromolecule modification 20.25% (16/79) 1.46 0.000185 0.00085
GO:0004521 endoribonuclease activity 3.8% (3/79) 4.68 0.000221 0.001006
GO:1901362 organic cyclic compound biosynthetic process 17.72% (14/79) 1.57 0.00022 0.001007
GO:0009891 positive regulation of biosynthetic process 10.13% (8/79) 2.25 0.000273 0.001234
GO:0010497 plasmodesmata-mediated intercellular transport 2.53% (2/79) 6.28 0.000286 0.001287
GO:0045893 positive regulation of transcription, DNA-templated 8.86% (7/79) 2.44 0.000313 0.001373
GO:0051254 positive regulation of RNA metabolic process 8.86% (7/79) 2.44 0.000313 0.001373
GO:1903508 positive regulation of nucleic acid-templated transcription 8.86% (7/79) 2.44 0.000313 0.001373
GO:1902680 positive regulation of RNA biosynthetic process 8.86% (7/79) 2.44 0.000313 0.001373
GO:0045935 positive regulation of nucleobase-containing compound metabolic process 8.86% (7/79) 2.4 0.000371 0.001618
GO:0009893 positive regulation of metabolic process 10.13% (8/79) 2.17 0.000406 0.001759
GO:0010496 intercellular transport 2.53% (2/79) 5.99 0.000436 0.001866
GO:0019747 regulation of isoprenoid metabolic process 2.53% (2/79) 5.99 0.000436 0.001866
GO:0016051 carbohydrate biosynthetic process 11.39% (9/79) 1.93 0.000591 0.002515
GO:0006796 phosphate-containing compound metabolic process 17.72% (14/79) 1.43 0.000599 0.002534
GO:0016787 hydrolase activity 20.25% (16/79) 1.29 0.000653 0.002749
GO:0006793 phosphorus metabolic process 17.72% (14/79) 1.41 0.000674 0.00282
GO:0090626 plant epidermis morphogenesis 5.06% (4/79) 3.32 0.000704 0.002914
GO:0010103 stomatal complex morphogenesis 5.06% (4/79) 3.32 0.000704 0.002914
GO:0009941 chloroplast envelope 8.86% (7/79) 2.19 0.000859 0.003534
GO:0009526 plastid envelope 8.86% (7/79) 2.18 0.000907 0.00371
GO:0045037 protein import into chloroplast stroma 2.53% (2/79) 5.45 0.000942 0.003831
GO:0044260 cellular macromolecule metabolic process 26.58% (21/79) 1.02 0.00101 0.004083
GO:0000229 cytoplasmic chromosome 2.53% (2/79) 5.28 0.001197 0.004787
GO:0009508 plastid chromosome 2.53% (2/79) 5.28 0.001197 0.004787
GO:0006605 protein targeting 10.13% (8/79) 1.91 0.001294 0.005149
GO:0016887 ATPase activity 7.59% (6/79) 2.31 0.001341 0.005278
GO:0010020 chloroplast fission 2.53% (2/79) 5.2 0.001335 0.005282
GO:0031969 chloroplast membrane 3.8% (3/79) 3.77 0.00141 0.005517
GO:0043572 plastid fission 2.53% (2/79) 5.13 0.001481 0.005764
GO:0048522 positive regulation of cellular process 10.13% (8/79) 1.87 0.001555 0.006022
GO:0035639 purine ribonucleoside triphosphate binding 8.86% (7/79) 2.04 0.001598 0.006154
GO:0003724 RNA helicase activity 2.53% (2/79) 5.06 0.001633 0.006259
GO:0006098 pentose-phosphate shunt 5.06% (4/79) 2.99 0.001643 0.006261
GO:0031967 organelle envelope 8.86% (7/79) 2.03 0.001675 0.006318
GO:0031975 envelope 8.86% (7/79) 2.03 0.001675 0.006318
GO:0018130 heterocycle biosynthetic process 12.66% (10/79) 1.59 0.001689 0.006338
GO:0010675 regulation of cellular carbohydrate metabolic process 2.53% (2/79) 4.99 0.001793 0.006661
GO:0017076 purine nucleotide binding 8.86% (7/79) 2.01 0.001805 0.00667
GO:0032555 purine ribonucleotide binding 8.86% (7/79) 2.01 0.001788 0.006677
GO:0070035 purine NTP-dependent helicase activity 3.8% (3/79) 3.63 0.001872 0.006816
GO:0008026 ATP-dependent helicase activity 3.8% (3/79) 3.63 0.001872 0.006816
GO:0051156 glucose 6-phosphate metabolic process 5.06% (4/79) 2.94 0.001857 0.006826
GO:0032553 ribonucleotide binding 8.86% (7/79) 1.99 0.00189 0.006846
GO:0034654 nucleobase-containing compound biosynthetic process 10.13% (8/79) 1.82 0.001916 0.006905
GO:0042170 plastid membrane 3.8% (3/79) 3.61 0.001936 0.006943
GO:0046890 regulation of lipid biosynthetic process 2.53% (2/79) 4.93 0.001961 0.006997
GO:0006739 NADP metabolic process 5.06% (4/79) 2.91 0.002009 0.007136
GO:0097367 carbohydrate derivative binding 8.86% (7/79) 1.97 0.00207 0.007315
GO:0099402 plant organ development 8.86% (7/79) 1.97 0.002107 0.007411
GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters 2.53% (2/79) 4.87 0.002135 0.007472
GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters 2.53% (2/79) 4.81 0.002316 0.008068
GO:0019220 regulation of phosphate metabolic process 5.06% (4/79) 2.84 0.002429 0.008381
GO:0051174 regulation of phosphorus metabolic process 5.06% (4/79) 2.84 0.002429 0.008381
GO:0034613 cellular protein localization 10.13% (8/79) 1.75 0.002597 0.008918
GO:0000376 RNA splicing, via transesterification reactions with guanosine as nucleophile 1.27% (1/79) 8.45 0.002857 0.009326
GO:0010494 cytoplasmic stress granule 1.27% (1/79) 8.45 0.002857 0.009326
GO:0042407 cristae formation 1.27% (1/79) 8.45 0.002857 0.009326
GO:1903726 negative regulation of phospholipid metabolic process 1.27% (1/79) 8.45 0.002857 0.009326
GO:0010677 negative regulation of cellular carbohydrate metabolic process 1.27% (1/79) 8.45 0.002857 0.009326
GO:0071072 negative regulation of phospholipid biosynthetic process 1.27% (1/79) 8.45 0.002857 0.009326
GO:0010323 negative regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway 1.27% (1/79) 8.45 0.002857 0.009326
GO:0000372 Group I intron splicing 1.27% (1/79) 8.45 0.002857 0.009326
GO:0003824 catalytic activity 39.24% (31/79) 0.67 0.002787 0.009527
GO:0000166 nucleotide binding 10.13% (8/79) 1.73 0.002814 0.009529
GO:1901265 nucleoside phosphate binding 10.13% (8/79) 1.73 0.002814 0.009529
GO:0051234 establishment of localization 21.52% (17/79) 1.04 0.00297 0.009653
GO:0009073 aromatic amino acid family biosynthetic process 3.8% (3/79) 3.34 0.003321 0.010745
GO:1901363 heterocyclic compound binding 21.52% (17/79) 1.02 0.003366 0.010794
GO:0070727 cellular macromolecule localization 10.13% (8/79) 1.69 0.003361 0.010826
GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile 3.8% (3/79) 3.31 0.003504 0.011139
GO:0000375 RNA splicing, via transesterification reactions 3.8% (3/79) 3.31 0.003504 0.011139
GO:0003723 RNA binding 7.59% (6/79) 2.03 0.003543 0.011214
GO:0097159 organic cyclic compound binding 21.52% (17/79) 1.01 0.003598 0.01134
GO:0032787 monocarboxylic acid metabolic process 12.66% (10/79) 1.42 0.004014 0.012594
GO:0006886 intracellular protein transport 10.13% (8/79) 1.64 0.004177 0.013052
GO:0006109 regulation of carbohydrate metabolic process 2.53% (2/79) 4.2 0.005299 0.016486
GO:0004654 polyribonucleotide nucleotidyltransferase activity 1.27% (1/79) 7.45 0.005705 0.016747
GO:0009663 plasmodesma organization 1.27% (1/79) 7.45 0.005705 0.016747
GO:0006264 mitochondrial DNA replication 1.27% (1/79) 7.45 0.005705 0.016747
GO:0004816 asparagine-tRNA ligase activity 1.27% (1/79) 7.45 0.005705 0.016747
GO:0033258 plastid DNA metabolic process 1.27% (1/79) 7.45 0.005705 0.016747
GO:0004818 glutamate-tRNA ligase activity 1.27% (1/79) 7.45 0.005705 0.016747
GO:0006421 asparaginyl-tRNA aminoacylation 1.27% (1/79) 7.45 0.005705 0.016747
GO:0033259 plastid DNA replication 1.27% (1/79) 7.45 0.005705 0.016747
GO:0004828 serine-tRNA ligase activity 1.27% (1/79) 7.45 0.005705 0.016747
GO:0050567 glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity 1.27% (1/79) 7.45 0.005705 0.016747
GO:0006434 seryl-tRNA aminoacylation 1.27% (1/79) 7.45 0.005705 0.016747
GO:0045184 establishment of protein localization 10.13% (8/79) 1.57 0.005473 0.016883
GO:0015031 protein transport 10.13% (8/79) 1.57 0.005473 0.016883
GO:0008104 protein localization 10.13% (8/79) 1.55 0.005859 0.017129
GO:0006397 mRNA processing 3.8% (3/79) 3.06 0.005676 0.017434
GO:0051179 localization 21.52% (17/79) 0.94 0.005987 0.017435
GO:0044271 cellular nitrogen compound biosynthetic process 12.66% (10/79) 1.31 0.006649 0.019286
GO:0005694 chromosome 2.53% (2/79) 4.03 0.006744 0.019406
GO:0010565 regulation of cellular ketone metabolic process 2.53% (2/79) 4.03 0.006744 0.019406
GO:0043168 anion binding 8.86% (7/79) 1.65 0.006919 0.01983
GO:0003924 GTPase activity 2.53% (2/79) 3.99 0.007052 0.020055
GO:0009706 chloroplast inner membrane 2.53% (2/79) 3.99 0.007052 0.020055
GO:0048518 positive regulation of biological process 10.13% (8/79) 1.5 0.007225 0.020466
GO:0019216 regulation of lipid metabolic process 2.53% (2/79) 3.93 0.007687 0.021692
GO:0009528 plastid inner membrane 2.53% (2/79) 3.9 0.008014 0.022527
GO:0009513 etioplast 1.27% (1/79) 6.87 0.008546 0.023127
GO:0045827 negative regulation of isoprenoid metabolic process 1.27% (1/79) 6.87 0.008546 0.023127
GO:0004817 cysteine-tRNA ligase activity 1.27% (1/79) 6.87 0.008546 0.023127
GO:0032042 mitochondrial DNA metabolic process 1.27% (1/79) 6.87 0.008546 0.023127
GO:0006423 cysteinyl-tRNA aminoacylation 1.27% (1/79) 6.87 0.008546 0.023127
GO:0019156 isoamylase activity 1.27% (1/79) 6.87 0.008546 0.023127
GO:0004047 aminomethyltransferase activity 1.27% (1/79) 6.87 0.008546 0.023127
GO:0000272 polysaccharide catabolic process 2.53% (2/79) 3.87 0.008347 0.023283
GO:0051246 regulation of protein metabolic process 5.06% (4/79) 2.33 0.008325 0.023311
GO:0046777 protein autophosphorylation 3.8% (3/79) 2.84 0.008666 0.023366
GO:0033036 macromolecule localization 10.13% (8/79) 1.46 0.008482 0.023568
GO:0046907 intracellular transport 10.13% (8/79) 1.44 0.009069 0.024361
GO:0071554 cell wall organization or biogenesis 7.59% (6/79) 1.73 0.009457 0.02531
GO:0008652 cellular amino acid biosynthetic process 6.33% (5/79) 1.95 0.009648 0.025727
GO:0032549 ribonucleoside binding 3.8% (3/79) 2.74 0.010359 0.026743
GO:0032550 purine ribonucleoside binding 3.8% (3/79) 2.74 0.010359 0.026743
GO:0001883 purine nucleoside binding 3.8% (3/79) 2.74 0.010359 0.026743
GO:0032561 guanyl ribonucleotide binding 3.8% (3/79) 2.74 0.010359 0.026743
GO:0005525 GTP binding 3.8% (3/79) 2.74 0.010359 0.026743
GO:0001882 nucleoside binding 3.8% (3/79) 2.74 0.010359 0.026743
GO:0019001 guanyl nucleotide binding 3.8% (3/79) 2.74 0.010359 0.026743
GO:0062012 regulation of small molecule metabolic process 2.53% (2/79) 3.7 0.010474 0.026942
GO:0015833 peptide transport 10.13% (8/79) 1.41 0.010277 0.027306
GO:0090698 post-embryonic plant morphogenesis 5.06% (4/79) 2.23 0.01067 0.02735
GO:0042886 amide transport 10.13% (8/79) 1.4 0.010725 0.027395
GO:0005975 carbohydrate metabolic process 11.39% (9/79) 1.31 0.010356 0.027415
GO:0045833 negative regulation of lipid metabolic process 1.27% (1/79) 6.45 0.011378 0.028662
GO:0007007 inner mitochondrial membrane organization 1.27% (1/79) 6.45 0.011378 0.028662
GO:0051055 negative regulation of lipid biosynthetic process 1.27% (1/79) 6.45 0.011378 0.028662
GO:0007006 mitochondrial membrane organization 1.27% (1/79) 6.45 0.011378 0.028662
GO:0036094 small molecule binding 10.13% (8/79) 1.34 0.013858 0.034788
GO:0004133 glycogen debranching enzyme activity 1.27% (1/79) 6.13 0.014203 0.03505
GO:0019843 rRNA binding 1.27% (1/79) 6.13 0.014203 0.03505
GO:0046209 nitric oxide metabolic process 1.27% (1/79) 6.13 0.014203 0.03505
GO:0045912 negative regulation of carbohydrate metabolic process 1.27% (1/79) 6.13 0.014203 0.03505
GO:0006809 nitric oxide biosynthetic process 1.27% (1/79) 6.13 0.014203 0.03505
GO:0042546 cell wall biogenesis 3.8% (3/79) 2.54 0.014938 0.03674
GO:0010098 suspensor development 1.27% (1/79) 5.87 0.017019 0.040891
GO:0016123 xanthophyll biosynthetic process 1.27% (1/79) 5.87 0.017019 0.040891
GO:0010021 amylopectin biosynthetic process 1.27% (1/79) 5.87 0.017019 0.040891
GO:0004161 dimethylallyltranstransferase activity 1.27% (1/79) 5.87 0.017019 0.040891
GO:0004526 ribonuclease P activity 1.27% (1/79) 5.87 0.017019 0.040891
GO:2000896 amylopectin metabolic process 1.27% (1/79) 5.87 0.017019 0.040891
GO:0009965 leaf morphogenesis 3.8% (3/79) 2.48 0.016759 0.041079
GO:0062014 negative regulation of small molecule metabolic process 1.27% (1/79) 5.64 0.019828 0.047019
GO:0045216 cell-cell junction organization 1.27% (1/79) 5.64 0.019828 0.047019
GO:0042136 neurotransmitter biosynthetic process 1.27% (1/79) 5.64 0.019828 0.047019
GO:0016120 carotene biosynthetic process 1.27% (1/79) 5.64 0.019828 0.047019
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_23 0.021 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_72 0.023 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_86 0.026 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_135 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_139 0.035 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_183 0.026 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_211 0.023 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_232 0.027 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_67 0.025 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_74 0.023 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_106 0.022 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_144 0.027 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_147 0.022 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_153 0.058 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_179 0.024 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_185 0.035 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_197 0.032 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_211 0.062 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_225 0.067 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_227 0.043 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_231 0.028 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_235 0.025 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_239 0.032 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_246 0.023 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_248 0.088 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_22 0.023 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_136 0.024 Archaeplastida Compare
Gingko biloba HCCA Cluster_34 0.046 Archaeplastida Compare
Gingko biloba HCCA Cluster_135 0.092 Archaeplastida Compare
Gingko biloba HCCA Cluster_151 0.109 Archaeplastida Compare
Gingko biloba HCCA Cluster_175 0.022 Archaeplastida Compare
Gingko biloba HCCA Cluster_202 0.066 Archaeplastida Compare
Gingko biloba HCCA Cluster_205 0.033 Archaeplastida Compare
Gingko biloba HCCA Cluster_229 0.02 Archaeplastida Compare
Gingko biloba HCCA Cluster_231 0.02 Archaeplastida Compare
Gingko biloba HCCA Cluster_241 0.023 Archaeplastida Compare
Gingko biloba HCCA Cluster_245 0.047 Archaeplastida Compare
Gingko biloba HCCA Cluster_250 0.026 Archaeplastida Compare
Gingko biloba HCCA Cluster_302 0.042 Archaeplastida Compare
Gingko biloba HCCA Cluster_324 0.029 Archaeplastida Compare
Gingko biloba HCCA Cluster_327 0.037 Archaeplastida Compare
Gingko biloba HCCA Cluster_337 0.034 Archaeplastida Compare
Zea mays HCCA Cluster_6 0.027 Archaeplastida Compare
Zea mays HCCA Cluster_39 0.08 Archaeplastida Compare
Zea mays HCCA Cluster_70 0.033 Archaeplastida Compare
Zea mays HCCA Cluster_107 0.036 Archaeplastida Compare
Zea mays HCCA Cluster_133 0.026 Archaeplastida Compare
Zea mays HCCA Cluster_158 0.028 Archaeplastida Compare
Zea mays HCCA Cluster_180 0.084 Archaeplastida Compare
Zea mays HCCA Cluster_185 0.026 Archaeplastida Compare
Zea mays HCCA Cluster_199 0.103 Archaeplastida Compare
Zea mays HCCA Cluster_216 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_232 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_268 0.038 Archaeplastida Compare
Zea mays HCCA Cluster_318 0.049 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_41 0.043 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_65 0.098 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_83 0.023 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_110 0.023 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_145 0.038 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_175 0.025 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_19 0.023 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_20 0.172 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_241 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_275 0.024 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_279 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_294 0.024 Archaeplastida Compare
Picea abies HCCA Cluster_19 0.027 Archaeplastida Compare
Picea abies HCCA Cluster_35 0.031 Archaeplastida Compare
Picea abies HCCA Cluster_53 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_88 0.061 Archaeplastida Compare
Picea abies HCCA Cluster_93 0.026 Archaeplastida Compare
Picea abies HCCA Cluster_195 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_269 0.077 Archaeplastida Compare
Picea abies HCCA Cluster_341 0.03 Archaeplastida Compare
Picea abies HCCA Cluster_354 0.052 Archaeplastida Compare
Picea abies HCCA Cluster_362 0.041 Archaeplastida Compare
Picea abies HCCA Cluster_472 0.024 Archaeplastida Compare
Picea abies HCCA Cluster_495 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_520 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_49 0.025 Archaeplastida Compare
Oryza sativa HCCA Cluster_54 0.049 Archaeplastida Compare
Oryza sativa HCCA Cluster_90 0.052 Archaeplastida Compare
Oryza sativa HCCA Cluster_110 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_114 0.032 Archaeplastida Compare
Oryza sativa HCCA Cluster_139 0.114 Archaeplastida Compare
Oryza sativa HCCA Cluster_167 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_218 0.068 Archaeplastida Compare
Oryza sativa HCCA Cluster_254 0.025 Archaeplastida Compare
Oryza sativa HCCA Cluster_256 0.037 Archaeplastida Compare
Oryza sativa HCCA Cluster_257 0.024 Archaeplastida Compare
Oryza sativa HCCA Cluster_271 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_9 0.037 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_20 0.02 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_32 0.037 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_100 0.036 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_106 0.029 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_140 0.02 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_147 0.033 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_170 0.024 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_175 0.025 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_192 0.022 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_219 0.035 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_32 0.036 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_33 0.037 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_75 0.042 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_102 0.034 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_119 0.032 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_125 0.028 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_135 0.023 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_140 0.036 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_160 0.03 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_211 0.105 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_216 0.023 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_224 0.025 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_248 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_253 0.108 Archaeplastida Compare
Vitis vinifera HCCA Cluster_33 0.022 Archaeplastida Compare
Vitis vinifera HCCA Cluster_35 0.024 Archaeplastida Compare
Vitis vinifera HCCA Cluster_52 0.082 Archaeplastida Compare
Vitis vinifera HCCA Cluster_72 0.103 Archaeplastida Compare
Vitis vinifera HCCA Cluster_84 0.033 Archaeplastida Compare
Vitis vinifera HCCA Cluster_93 0.021 Archaeplastida Compare
Vitis vinifera HCCA Cluster_105 0.021 Archaeplastida Compare
Vitis vinifera HCCA Cluster_137 0.024 Archaeplastida Compare
Vitis vinifera HCCA Cluster_143 0.029 Archaeplastida Compare
Vitis vinifera HCCA Cluster_152 0.036 Archaeplastida Compare
Vitis vinifera HCCA Cluster_155 0.043 Archaeplastida Compare
Vitis vinifera HCCA Cluster_172 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_178 0.051 Archaeplastida Compare
Vitis vinifera HCCA Cluster_184 0.025 Archaeplastida Compare
Vitis vinifera HCCA Cluster_235 0.024 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_33 0.029 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_60 0.03 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_87 0.022 Archaeplastida Compare
Sequences (79) (download table)

InterPro Domains

GO Terms

Family Terms