Coexpression cluster: Cluster_335 (HCCA)

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003676 nucleic acid binding 23.53% (16/68) 2.85 0.0 0.0
GO:0044444 cytoplasmic part 13.24% (9/68) 3.9 0.0 1e-06
GO:1990904 ribonucleoprotein complex 10.29% (7/68) 4.31 0.0 1e-06
GO:0043603 cellular amide metabolic process 10.29% (7/68) 4.32 0.0 1e-06
GO:0005198 structural molecule activity 10.29% (7/68) 4.33 0.0 1e-06
GO:0043228 non-membrane-bounded organelle 10.29% (7/68) 4.35 0.0 1e-06
GO:0043232 intracellular non-membrane-bounded organelle 10.29% (7/68) 4.35 0.0 1e-06
GO:0043043 peptide biosynthetic process 10.29% (7/68) 4.45 0.0 1e-06
GO:0003735 structural constituent of ribosome 10.29% (7/68) 4.45 0.0 1e-06
GO:0006518 peptide metabolic process 10.29% (7/68) 4.41 0.0 1e-06
GO:0043604 amide biosynthetic process 10.29% (7/68) 4.37 0.0 1e-06
GO:0006412 translation 10.29% (7/68) 4.48 0.0 2e-06
GO:0005840 ribosome 10.29% (7/68) 4.53 0.0 2e-06
GO:0034645 cellular macromolecule biosynthetic process 11.76% (8/68) 3.78 0.0 2e-06
GO:0009059 macromolecule biosynthetic process 11.76% (8/68) 3.61 0.0 4e-06
GO:0003697 single-stranded DNA binding 4.41% (3/68) 7.37 1e-06 9e-06
GO:0032991 protein-containing complex 13.24% (9/68) 3.15 1e-06 9e-06
GO:0034641 cellular nitrogen compound metabolic process 16.18% (11/68) 2.64 1e-06 1.6e-05
GO:0044424 intracellular part 14.71% (10/68) 2.77 2e-06 2.1e-05
GO:0044464 cell part 14.71% (10/68) 2.67 4e-06 3.7e-05
GO:0044249 cellular biosynthetic process 13.24% (9/68) 2.81 5e-06 4.5e-05
GO:0003723 RNA binding 8.82% (6/68) 3.78 5e-06 4.7e-05
GO:0043226 organelle 10.29% (7/68) 3.37 5e-06 4.8e-05
GO:1901566 organonitrogen compound biosynthetic process 10.29% (7/68) 3.34 6e-06 4.9e-05
GO:0043229 intracellular organelle 10.29% (7/68) 3.38 5e-06 4.9e-05
GO:1901576 organic substance biosynthetic process 13.24% (9/68) 2.74 8e-06 6.1e-05
GO:0044271 cellular nitrogen compound biosynthetic process 10.29% (7/68) 3.17 1.3e-05 0.0001
GO:0009058 biosynthetic process 13.24% (9/68) 2.6 1.7e-05 0.000123
GO:0003677 DNA binding 10.29% (7/68) 2.84 5.5e-05 0.000382
GO:0097159 organic cyclic compound binding 25.0% (17/68) 1.4 0.00015 0.00098
GO:1901363 heterocyclic compound binding 25.0% (17/68) 1.4 0.00015 0.00098
GO:0044260 cellular macromolecule metabolic process 16.18% (11/68) 1.69 0.000551 0.003498
GO:0044237 cellular metabolic process 19.12% (13/68) 1.38 0.001182 0.00727
GO:0005744 TIM23 mitochondrial import inner membrane translocase complex 1.47% (1/68) 9.25 0.001646 0.009828
GO:0006807 nitrogen compound metabolic process 17.65% (12/68) 1.4 0.001701 0.009867
GO:0009987 cellular process 20.59% (14/68) 1.22 0.002224 0.012541
GO:0044743 protein transmembrane import into intracellular organelle 1.47% (1/68) 8.25 0.00329 0.013094
GO:0004834 tryptophan synthase activity 1.47% (1/68) 8.25 0.00329 0.013094
GO:0006743 ubiquinone metabolic process 1.47% (1/68) 8.25 0.00329 0.013094
GO:0006744 ubiquinone biosynthetic process 1.47% (1/68) 8.25 0.00329 0.013094
GO:0072655 establishment of protein localization to mitochondrion 1.47% (1/68) 8.25 0.00329 0.013094
GO:0071806 protein transmembrane transport 1.47% (1/68) 8.25 0.00329 0.013094
GO:1901663 quinone biosynthetic process 1.47% (1/68) 8.25 0.00329 0.013094
GO:0042181 ketone biosynthetic process 1.47% (1/68) 8.25 0.00329 0.013094
GO:0070585 protein localization to mitochondrion 1.47% (1/68) 8.25 0.00329 0.013094
GO:0065002 intracellular protein transmembrane transport 1.47% (1/68) 8.25 0.00329 0.013094
GO:1901661 quinone metabolic process 1.47% (1/68) 8.25 0.00329 0.013094
GO:0030150 protein import into mitochondrial matrix 1.47% (1/68) 8.25 0.00329 0.013094
GO:0043170 macromolecule metabolic process 16.18% (11/68) 1.41 0.002581 0.014159
GO:0005575 cellular_component 14.71% (10/68) 1.47 0.003099 0.016553
GO:0044267 cellular protein metabolic process 11.76% (8/68) 1.69 0.003203 0.016672
GO:0000796 condensin complex 1.47% (1/68) 7.66 0.00493 0.017256
GO:0007076 mitotic chromosome condensation 1.47% (1/68) 7.66 0.00493 0.017256
GO:0006839 mitochondrial transport 1.47% (1/68) 7.66 0.00493 0.017256
GO:0030261 chromosome condensation 1.47% (1/68) 7.66 0.00493 0.017256
GO:1990542 mitochondrial transmembrane transport 1.47% (1/68) 7.66 0.00493 0.017256
GO:0008097 5S rRNA binding 1.47% (1/68) 7.66 0.00493 0.017256
GO:0006323 DNA packaging 1.47% (1/68) 7.66 0.00493 0.017256
GO:0071704 organic substance metabolic process 19.12% (13/68) 1.14 0.005261 0.0181
GO:0006281 DNA repair 2.94% (2/68) 4.18 0.00551 0.018641
GO:0051716 cellular response to stimulus 2.94% (2/68) 4.12 0.005999 0.01933
GO:0006974 cellular response to DNA damage stimulus 2.94% (2/68) 4.12 0.005999 0.01933
GO:0033554 cellular response to stress 2.94% (2/68) 4.12 0.005999 0.01933
GO:0006950 response to stress 4.41% (3/68) 3.01 0.006235 0.019776
GO:0042180 cellular ketone metabolic process 1.47% (1/68) 7.25 0.006569 0.020514
GO:0019538 protein metabolic process 11.76% (8/68) 1.48 0.007704 0.023697
GO:1901564 organonitrogen compound metabolic process 13.24% (9/68) 1.35 0.008419 0.025508
GO:0006586 indolalkylamine metabolic process 1.47% (1/68) 6.66 0.009837 0.028125
GO:0006568 tryptophan metabolic process 1.47% (1/68) 6.66 0.009837 0.028125
GO:0042430 indole-containing compound metabolic process 1.47% (1/68) 6.66 0.009837 0.028125
GO:0044238 primary metabolic process 17.65% (12/68) 1.09 0.009736 0.029066
GO:0003674 molecular_function 41.18% (28/68) 0.58 0.01072 0.030225
GO:1903047 mitotic cell cycle process 1.47% (1/68) 6.44 0.011467 0.031888
GO:0044446 intracellular organelle part 4.41% (3/68) 2.58 0.01403 0.037974
GO:0044422 organelle part 4.41% (3/68) 2.58 0.01403 0.037974
GO:0050896 response to stimulus 4.41% (3/68) 2.57 0.014276 0.038131
GO:0006259 DNA metabolic process 4.41% (3/68) 2.52 0.01554 0.04097
GO:0005488 binding 27.94% (19/68) 0.72 0.016415 0.042181
GO:0019843 rRNA binding 1.47% (1/68) 5.92 0.016342 0.04253
GO:0098800 inner mitochondrial membrane protein complex 1.47% (1/68) 5.79 0.017961 0.045577
GO:0044455 mitochondrial membrane part 1.47% (1/68) 5.66 0.019578 0.047884
GO:0017038 protein import 1.47% (1/68) 5.66 0.019578 0.047884
GO:0071103 DNA conformation change 1.47% (1/68) 5.66 0.019578 0.047884
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_39 0.028 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_91 0.028 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_134 0.057 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_183 0.041 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_207 0.029 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_50 0.047 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_129 0.025 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_194 0.022 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_210 0.019 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_15 0.045 Archaeplastida Compare
Gingko biloba HCCA Cluster_129 0.021 Archaeplastida Compare
Gingko biloba HCCA Cluster_287 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_56 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_131 0.024 Archaeplastida Compare
Zea mays HCCA Cluster_137 0.063 Archaeplastida Compare
Zea mays HCCA Cluster_181 0.029 Archaeplastida Compare
Zea mays HCCA Cluster_199 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_201 0.024 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_36 0.052 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_69 0.023 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_28 0.055 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_124 0.026 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_244 0.024 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_248 0.062 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_286 0.027 Archaeplastida Compare
Picea abies HCCA Cluster_84 0.034 Archaeplastida Compare
Picea abies HCCA Cluster_169 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_194 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_208 0.03 Archaeplastida Compare
Picea abies HCCA Cluster_261 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_296 0.028 Archaeplastida Compare
Picea abies HCCA Cluster_376 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_379 0.033 Archaeplastida Compare
Picea abies HCCA Cluster_486 0.029 Archaeplastida Compare
Picea abies HCCA Cluster_498 0.026 Archaeplastida Compare
Oryza sativa HCCA Cluster_94 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_140 0.052 Archaeplastida Compare
Oryza sativa HCCA Cluster_173 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_191 0.034 Archaeplastida Compare
Oryza sativa HCCA Cluster_273 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_318 0.024 Archaeplastida Compare
Oryza sativa HCCA Cluster_354 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_3 0.025 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_88 0.025 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_180 0.037 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_32 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_86 0.081 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_142 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_209 0.027 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_222 0.037 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_229 0.022 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_251 0.043 Archaeplastida Compare
Vitis vinifera HCCA Cluster_22 0.038 Archaeplastida Compare
Vitis vinifera HCCA Cluster_60 0.039 Archaeplastida Compare
Vitis vinifera HCCA Cluster_132 0.023 Archaeplastida Compare
Vitis vinifera HCCA Cluster_152 0.038 Archaeplastida Compare
Vitis vinifera HCCA Cluster_172 0.035 Archaeplastida Compare
Vitis vinifera HCCA Cluster_236 0.019 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_35 0.061 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_121 0.022 Archaeplastida Compare
Sequences (68) (download table)

InterPro Domains

GO Terms

Family Terms