Coexpression cluster: Cluster_136 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0016192 vesicle-mediated transport 23.81% (40/168) 5.87 0.0 0.0
GO:0046907 intracellular transport 25.6% (43/168) 6.1 0.0 0.0
GO:0045184 establishment of protein localization 24.4% (41/168) 5.81 0.0 0.0
GO:0051641 cellular localization 26.79% (45/168) 6.02 0.0 0.0
GO:0051649 establishment of localization in cell 25.6% (43/168) 6.1 0.0 0.0
GO:0071702 organic substance transport 24.4% (41/168) 5.51 0.0 0.0
GO:0042886 amide transport 24.4% (41/168) 5.84 0.0 0.0
GO:0033036 macromolecule localization 24.4% (41/168) 5.8 0.0 0.0
GO:0071705 nitrogen compound transport 24.4% (41/168) 5.59 0.0 0.0
GO:0015031 protein transport 24.4% (41/168) 5.84 0.0 0.0
GO:0030117 membrane coat 18.45% (31/168) 7.29 0.0 0.0
GO:0006886 intracellular protein transport 23.21% (39/168) 6.23 0.0 0.0
GO:0015833 peptide transport 24.4% (41/168) 5.84 0.0 0.0
GO:0008104 protein localization 24.4% (41/168) 5.8 0.0 0.0
GO:0098796 membrane protein complex 20.24% (34/168) 5.55 0.0 0.0
GO:0051179 localization 32.14% (54/168) 3.51 0.0 0.0
GO:0006810 transport 31.55% (53/168) 3.5 0.0 0.0
GO:0051234 establishment of localization 31.55% (53/168) 3.5 0.0 0.0
GO:0030120 vesicle coat 11.31% (19/168) 7.34 0.0 0.0
GO:0044444 cytoplasmic part 23.81% (40/168) 4.14 0.0 0.0
GO:0044433 cytoplasmic vesicle part 11.31% (19/168) 7.15 0.0 0.0
GO:0044425 membrane part 23.81% (40/168) 3.53 0.0 0.0
GO:0032991 protein-containing complex 23.21% (39/168) 3.47 0.0 0.0
GO:0044464 cell part 26.79% (45/168) 3.07 0.0 0.0
GO:0044424 intracellular part 25.6% (43/168) 3.06 0.0 0.0
GO:0044431 Golgi apparatus part 8.33% (14/168) 6.63 0.0 0.0
GO:0005575 cellular_component 33.33% (56/168) 2.3 0.0 0.0
GO:0044422 organelle part 14.88% (25/168) 4.08 0.0 0.0
GO:0044446 intracellular organelle part 14.88% (25/168) 4.08 0.0 0.0
GO:0030126 COPI vesicle coat 4.76% (8/168) 7.63 0.0 0.0
GO:0008150 biological_process 47.02% (79/168) 1.35 0.0 0.0
GO:0005515 protein binding 23.21% (39/168) 2.2 0.0 0.0
GO:0030127 COPII vesicle coat 4.17% (7/168) 7.17 0.0 0.0
GO:0006888 ER to Golgi vesicle-mediated transport 4.17% (7/168) 6.67 0.0 0.0
GO:0048193 Golgi vesicle transport 4.76% (8/168) 5.74 0.0 0.0
GO:0030131 clathrin adaptor complex 2.98% (5/168) 7.69 0.0 0.0
GO:0051020 GTPase binding 4.76% (8/168) 5.49 0.0 0.0
GO:0005198 structural molecule activity 8.93% (15/168) 3.43 0.0 0.0
GO:0030119 AP-type membrane coat adaptor complex 2.98% (5/168) 7.47 0.0 0.0
GO:0043413 macromolecule glycosylation 4.76% (8/168) 5.0 0.0 0.0
GO:0006486 protein glycosylation 4.76% (8/168) 5.0 0.0 0.0
GO:0019899 enzyme binding 4.76% (8/168) 4.95 0.0 0.0
GO:0042147 retrograde transport, endosome to Golgi 2.38% (4/168) 7.95 0.0 0.0
GO:0016482 cytosolic transport 2.38% (4/168) 7.95 0.0 0.0
GO:0070085 glycosylation 4.76% (8/168) 4.89 0.0 0.0
GO:0005488 binding 35.12% (59/168) 1.1 0.0 0.0
GO:0016197 endosomal transport 2.38% (4/168) 7.37 0.0 0.0
GO:0030132 clathrin coat of coated pit 2.38% (4/168) 7.14 0.0 0.0
GO:0030130 clathrin coat of trans-Golgi network vesicle 2.38% (4/168) 7.14 0.0 0.0
GO:0030125 clathrin vesicle coat 2.38% (4/168) 7.14 0.0 0.0
GO:0030118 clathrin coat 2.38% (4/168) 7.14 0.0 0.0
GO:0008536 Ran GTPase binding 2.98% (5/168) 5.95 0.0 0.0
GO:0003674 molecular_function 48.21% (81/168) 0.77 0.0 0.0
GO:0003924 GTPase activity 4.76% (8/168) 3.64 0.0 1e-06
GO:0031267 small GTPase binding 2.98% (5/168) 5.1 0.0 2e-06
GO:0017016 Ras GTPase binding 2.98% (5/168) 5.1 0.0 2e-06
GO:0032550 purine ribonucleoside binding 4.76% (8/168) 3.26 2e-06 9e-06
GO:0032549 ribonucleoside binding 4.76% (8/168) 3.26 2e-06 9e-06
GO:0005525 GTP binding 4.76% (8/168) 3.26 2e-06 9e-06
GO:0001883 purine nucleoside binding 4.76% (8/168) 3.26 2e-06 9e-06
GO:0032561 guanyl ribonucleotide binding 4.76% (8/168) 3.26 2e-06 9e-06
GO:0001882 nucleoside binding 4.76% (8/168) 3.26 2e-06 9e-06
GO:0019001 guanyl nucleotide binding 4.76% (8/168) 3.24 2e-06 1e-05
GO:0016462 pyrophosphatase activity 6.55% (11/168) 2.6 2e-06 1e-05
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 6.55% (11/168) 2.57 3e-06 1.1e-05
GO:0006996 organelle organization 2.98% (5/168) 4.49 3e-06 1.2e-05
GO:0098797 plasma membrane protein complex 2.38% (4/168) 5.31 3e-06 1.2e-05
GO:0016817 hydrolase activity, acting on acid anhydrides 6.55% (11/168) 2.56 3e-06 1.2e-05
GO:1902531 regulation of intracellular signal transduction 1.79% (3/168) 6.54 4e-06 1.2e-05
GO:0005086 ARF guanyl-nucleotide exchange factor activity 1.79% (3/168) 6.54 4e-06 1.2e-05
GO:0051056 regulation of small GTPase mediated signal transduction 1.79% (3/168) 6.54 4e-06 1.2e-05
GO:0046578 regulation of Ras protein signal transduction 1.79% (3/168) 6.54 4e-06 1.2e-05
GO:0032012 regulation of ARF protein signal transduction 1.79% (3/168) 6.54 4e-06 1.2e-05
GO:0044459 plasma membrane part 2.38% (4/168) 5.04 6e-06 2.2e-05
GO:0010646 regulation of cell communication 1.79% (3/168) 5.95 1.4e-05 4.6e-05
GO:0009966 regulation of signal transduction 1.79% (3/168) 5.95 1.4e-05 4.6e-05
GO:0023051 regulation of signaling 1.79% (3/168) 5.95 1.4e-05 4.6e-05
GO:0030906 retromer, cargo-selective complex 1.19% (2/168) 7.95 1.6e-05 5.1e-05
GO:0018279 protein N-linked glycosylation via asparagine 1.19% (2/168) 7.95 1.6e-05 5.1e-05
GO:0007030 Golgi organization 1.19% (2/168) 7.95 1.6e-05 5.1e-05
GO:0018196 peptidyl-asparagine modification 1.19% (2/168) 7.95 1.6e-05 5.1e-05
GO:0048583 regulation of response to stimulus 1.79% (3/168) 5.63 2.8e-05 8.8e-05
GO:0099023 tethering complex 2.38% (4/168) 4.4 4e-05 0.000123
GO:0017111 nucleoside-triphosphatase activity 5.36% (9/168) 2.4 6e-05 0.000179
GO:0005789 endoplasmic reticulum membrane 1.79% (3/168) 5.29 6e-05 0.000181
GO:0007010 cytoskeleton organization 1.79% (3/168) 5.21 7e-05 0.000207
GO:0004576 oligosaccharyl transferase activity 1.19% (2/168) 6.95 9.7e-05 0.000283
GO:0005085 guanyl-nucleotide exchange factor activity 1.79% (3/168) 5.01 0.000108 0.000312
GO:0016020 membrane 7.14% (12/168) 1.86 0.000137 0.000391
GO:0000062 fatty-acyl-CoA binding 1.19% (2/168) 6.63 0.000161 0.000449
GO:1901567 fatty acid derivative binding 1.19% (2/168) 6.63 0.000161 0.000449
GO:0016787 hydrolase activity 10.71% (18/168) 1.4 0.000182 0.000503
GO:0006887 exocytosis 1.79% (3/168) 4.41 0.000386 0.001053
GO:0032940 secretion by cell 1.79% (3/168) 4.37 0.00042 0.001122
GO:0046903 secretion 1.79% (3/168) 4.37 0.00042 0.001122
GO:0044432 endoplasmic reticulum part 1.79% (3/168) 4.33 0.000455 0.001204
GO:0044448 cell cortex part 1.79% (3/168) 4.25 0.000532 0.001379
GO:0000145 exocyst 1.79% (3/168) 4.25 0.000532 0.001379
GO:0043167 ion binding 15.48% (26/168) 0.99 0.000592 0.001519
GO:0006487 protein N-linked glycosylation 1.19% (2/168) 5.63 0.000715 0.001816
GO:0003779 actin binding 1.79% (3/168) 3.98 0.000922 0.002319
GO:0051640 organelle localization 1.19% (2/168) 5.37 0.001043 0.002453
GO:0022406 membrane docking 1.19% (2/168) 5.37 0.001043 0.002453
GO:0140056 organelle localization by membrane tethering 1.19% (2/168) 5.37 0.001043 0.002453
GO:0140029 exocytic process 1.19% (2/168) 5.37 0.001043 0.002453
GO:0048278 vesicle docking 1.19% (2/168) 5.37 0.001043 0.002453
GO:0006904 vesicle docking involved in exocytosis 1.19% (2/168) 5.37 0.001043 0.002453
GO:0005509 calcium ion binding 2.98% (5/168) 2.73 0.001014 0.002525
GO:0008270 zinc ion binding 4.17% (7/168) 2.15 0.001084 0.002526
GO:0009678 hydrogen-translocating pyrophosphatase activity 1.19% (2/168) 5.25 0.00123 0.002839
GO:0033218 amide binding 1.19% (2/168) 5.04 0.001646 0.003767
GO:0008092 cytoskeletal protein binding 2.38% (4/168) 2.93 0.001968 0.004462
GO:1901681 sulfur compound binding 1.19% (2/168) 4.86 0.002121 0.004768
GO:1902600 proton transmembrane transport 1.79% (3/168) 3.47 0.002568 0.005722
GO:0016043 cellular component organization 2.98% (5/168) 2.4 0.002704 0.005972
GO:0004427 inorganic diphosphatase activity 1.19% (2/168) 4.56 0.003241 0.007096
GO:0046872 metal ion binding 7.14% (12/168) 1.3 0.003774 0.008194
GO:0043169 cation binding 7.14% (12/168) 1.29 0.003925 0.00845
GO:0005801 cis-Golgi network 0.6% (1/168) 7.95 0.004041 0.008625
GO:0071840 cellular component organization or biogenesis 2.98% (5/168) 2.23 0.004511 0.009549
GO:0015672 monovalent inorganic cation transport 1.79% (3/168) 2.88 0.008085 0.016973
GO:0008237 metallopeptidase activity 1.19% (2/168) 3.82 0.008848 0.018422
GO:0098662 inorganic cation transmembrane transport 1.79% (3/168) 2.79 0.009462 0.019228
GO:0098655 cation transmembrane transport 1.79% (3/168) 2.79 0.009462 0.019228
GO:0098660 inorganic ion transmembrane transport 1.79% (3/168) 2.79 0.009462 0.019228
GO:0034220 ion transmembrane transport 1.79% (3/168) 2.69 0.011499 0.02318
GO:0033179 proton-transporting V-type ATPase, V0 domain 0.6% (1/168) 6.37 0.012074 0.023773
GO:0070646 protein modification by small protein removal 1.19% (2/168) 3.59 0.012003 0.023818
GO:0016579 protein deubiquitination 1.19% (2/168) 3.59 0.012003 0.023818
GO:0006811 ion transport 2.98% (5/168) 1.86 0.012945 0.025292
GO:0036211 protein modification process 7.14% (12/168) 1.03 0.015658 0.030131
GO:0006464 cellular protein modification process 7.14% (12/168) 1.03 0.015658 0.030131
GO:0043412 macromolecule modification 7.14% (12/168) 1.0 0.018316 0.03498
GO:0101005 ubiquitinyl hydrolase activity 1.19% (2/168) 3.25 0.018857 0.035218
GO:0036459 thiol-dependent ubiquitinyl hydrolase activity 1.19% (2/168) 3.25 0.018857 0.035218
GO:0019783 ubiquitin-like protein-specific protease activity 1.19% (2/168) 3.25 0.018857 0.035218
GO:0032555 purine ribonucleotide binding 8.33% (14/168) 0.9 0.01932 0.035819
GO:0017076 purine nucleotide binding 8.33% (14/168) 0.89 0.020123 0.036772
GO:0017119 Golgi transport complex 0.6% (1/168) 5.63 0.020042 0.036889
GO:0032553 ribonucleotide binding 8.33% (14/168) 0.88 0.020452 0.037105
GO:0097367 carbohydrate derivative binding 8.33% (14/168) 0.88 0.021376 0.038507
GO:0043015 gamma-tubulin binding 0.6% (1/168) 5.37 0.024003 0.042934
GO:0018193 peptidyl-amino acid modification 1.19% (2/168) 2.97 0.026985 0.047931
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_1 0.04 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_22 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_99 0.196 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_114 0.025 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_163 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_179 0.074 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_199 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_204 0.024 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_233 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_236 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_259 0.023 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_73 0.027 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_172 0.025 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_190 0.033 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_194 0.026 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_213 0.045 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_219 0.022 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_233 0.069 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_244 0.023 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_253 0.053 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_259 0.021 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_66 0.026 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_73 0.025 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_139 0.027 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_183 0.022 Archaeplastida Compare
Gingko biloba HCCA Cluster_147 0.074 Archaeplastida Compare
Gingko biloba HCCA Cluster_155 0.089 Archaeplastida Compare
Gingko biloba HCCA Cluster_213 0.036 Archaeplastida Compare
Gingko biloba HCCA Cluster_223 0.022 Archaeplastida Compare
Gingko biloba HCCA Cluster_256 0.059 Archaeplastida Compare
Gingko biloba HCCA Cluster_289 0.02 Archaeplastida Compare
Gingko biloba HCCA Cluster_318 0.055 Archaeplastida Compare
Zea mays HCCA Cluster_75 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_145 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_165 0.032 Archaeplastida Compare
Zea mays HCCA Cluster_170 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_339 0.024 Archaeplastida Compare
Zea mays HCCA Cluster_352 0.031 Archaeplastida Compare
Zea mays HCCA Cluster_361 0.019 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_68 0.089 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_71 0.028 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_72 0.09 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_111 0.029 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_128 0.043 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_153 0.019 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_179 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_8 0.021 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_11 0.031 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_95 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_111 0.076 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_126 0.027 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_146 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_149 0.026 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_152 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_186 0.075 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_187 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_237 0.048 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_253 0.049 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_263 0.027 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_267 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_270 0.024 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_272 0.03 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_295 0.029 Archaeplastida Compare
Picea abies HCCA Cluster_15 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_64 0.089 Archaeplastida Compare
Picea abies HCCA Cluster_220 0.032 Archaeplastida Compare
Picea abies HCCA Cluster_232 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_264 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_290 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_382 0.078 Archaeplastida Compare
Picea abies HCCA Cluster_409 0.064 Archaeplastida Compare
Picea abies HCCA Cluster_435 0.024 Archaeplastida Compare
Picea abies HCCA Cluster_462 0.025 Archaeplastida Compare
Picea abies HCCA Cluster_483 0.047 Archaeplastida Compare
Picea abies HCCA Cluster_495 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_516 0.024 Archaeplastida Compare
Picea abies HCCA Cluster_523 0.039 Archaeplastida Compare
Picea abies HCCA Cluster_536 0.035 Archaeplastida Compare
Oryza sativa HCCA Cluster_72 0.198 Archaeplastida Compare
Oryza sativa HCCA Cluster_164 0.024 Archaeplastida Compare
Oryza sativa HCCA Cluster_191 0.027 Archaeplastida Compare
Oryza sativa HCCA Cluster_215 0.04 Archaeplastida Compare
Oryza sativa HCCA Cluster_293 0.028 Archaeplastida Compare
Oryza sativa HCCA Cluster_316 0.075 Archaeplastida Compare
Oryza sativa HCCA Cluster_353 0.024 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_3 0.024 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_84 0.036 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_95 0.089 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_108 0.032 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_144 0.034 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_153 0.089 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_190 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_79 0.189 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_158 0.074 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_182 0.083 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_212 0.037 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_226 0.03 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_260 0.036 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_275 0.054 Archaeplastida Compare
Vitis vinifera HCCA Cluster_54 0.116 Archaeplastida Compare
Vitis vinifera HCCA Cluster_96 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_106 0.031 Archaeplastida Compare
Vitis vinifera HCCA Cluster_123 0.024 Archaeplastida Compare
Vitis vinifera HCCA Cluster_148 0.024 Archaeplastida Compare
Vitis vinifera HCCA Cluster_164 0.03 Archaeplastida Compare
Vitis vinifera HCCA Cluster_167 0.052 Archaeplastida Compare
Vitis vinifera HCCA Cluster_180 0.037 Archaeplastida Compare
Vitis vinifera HCCA Cluster_220 0.037 Archaeplastida Compare
Vitis vinifera HCCA Cluster_221 0.033 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_17 0.032 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_26 0.056 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_95 0.047 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_138 0.039 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_146 0.02 Archaeplastida Compare
Sequences (168) (download table)

InterPro Domains

GO Terms

Family Terms