Coexpression cluster: Cluster_275 (HCCA)

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0034645 cellular macromolecule biosynthetic process 18.84% (13/69) 4.01 0.0 0.0
GO:0009059 macromolecule biosynthetic process 18.84% (13/69) 3.91 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 23.19% (16/69) 3.2 0.0 0.0
GO:0044249 cellular biosynthetic process 20.29% (14/69) 3.25 0.0 0.0
GO:1901576 organic substance biosynthetic process 20.29% (14/69) 3.18 0.0 0.0
GO:0009058 biosynthetic process 20.29% (14/69) 3.05 0.0 0.0
GO:0043043 peptide biosynthetic process 13.04% (9/69) 4.08 0.0 0.0
GO:0006412 translation 13.04% (9/69) 4.12 0.0 0.0
GO:0003735 structural constituent of ribosome 13.04% (9/69) 4.1 0.0 0.0
GO:1990904 ribonucleoprotein complex 13.04% (9/69) 4.02 0.0 0.0
GO:0043604 amide biosynthetic process 13.04% (9/69) 4.03 0.0 0.0
GO:0044271 cellular nitrogen compound biosynthetic process 15.94% (11/69) 3.46 0.0 0.0
GO:0006518 peptide metabolic process 13.04% (9/69) 4.05 0.0 0.0
GO:0005198 structural molecule activity 13.04% (9/69) 3.98 0.0 0.0
GO:0043603 cellular amide metabolic process 13.04% (9/69) 3.98 0.0 0.0
GO:1901566 organonitrogen compound biosynthetic process 14.49% (10/69) 3.46 0.0 0.0
GO:0005840 ribosome 11.59% (8/69) 4.03 0.0 0.0
GO:0043232 intracellular non-membrane-bounded organelle 11.59% (8/69) 3.88 0.0 1e-06
GO:0043228 non-membrane-bounded organelle 11.59% (8/69) 3.88 0.0 1e-06
GO:0043226 organelle 14.49% (10/69) 3.27 0.0 1e-06
GO:0043229 intracellular organelle 14.49% (10/69) 3.27 0.0 1e-06
GO:0032991 protein-containing complex 15.94% (11/69) 2.93 0.0 2e-06
GO:0044444 cytoplasmic part 13.04% (9/69) 3.27 0.0 3e-06
GO:0044424 intracellular part 17.39% (12/69) 2.51 1e-06 8e-06
GO:0044464 cell part 17.39% (12/69) 2.45 2e-06 1.2e-05
GO:0006807 nitrogen compound metabolic process 23.19% (16/69) 1.71 2e-05 0.000134
GO:0009987 cellular process 26.09% (18/69) 1.55 2.3e-05 0.000155
GO:0043170 macromolecule metabolic process 21.74% (15/69) 1.75 2.7e-05 0.000172
GO:0044237 cellular metabolic process 23.19% (16/69) 1.62 4.4e-05 0.000273
GO:0044260 cellular macromolecule metabolic process 18.84% (13/69) 1.86 5e-05 0.000297
GO:0006310 DNA recombination 2.9% (2/69) 7.43 5.7e-05 0.000326
GO:0090304 nucleic acid metabolic process 8.7% (6/69) 2.92 0.000144 0.0008
GO:0046483 heterocycle metabolic process 10.14% (7/69) 2.55 0.000196 0.001059
GO:0006725 cellular aromatic compound metabolic process 10.14% (7/69) 2.54 0.000203 0.001063
GO:0044238 primary metabolic process 23.19% (16/69) 1.42 0.000214 0.001088
GO:1901360 organic cyclic compound metabolic process 10.14% (7/69) 2.5 0.000241 0.001194
GO:0071704 organic substance metabolic process 23.19% (16/69) 1.36 0.000343 0.001651
GO:0006139 nucleobase-containing compound metabolic process 8.7% (6/69) 2.51 0.000647 0.002953
GO:0005575 cellular_component 18.84% (13/69) 1.48 0.000637 0.002985
GO:0006260 DNA replication 2.9% (2/69) 5.33 0.001146 0.005099
GO:0009451 RNA modification 2.9% (2/69) 5.15 0.001471 0.006388
GO:0004635 phosphoribosyl-AMP cyclohydrolase activity 1.45% (1/69) 9.23 0.00166 0.007034
GO:0044267 cellular protein metabolic process 13.04% (9/69) 1.61 0.002583 0.010692
GO:0016070 RNA metabolic process 5.8% (4/69) 2.78 0.002832 0.011459
GO:0019238 cyclohydrolase activity 1.45% (1/69) 7.65 0.004971 0.019662
GO:0006974 cellular response to DNA damage stimulus 2.9% (2/69) 4.01 0.006966 0.023397
GO:0051716 cellular response to stimulus 2.9% (2/69) 4.01 0.006966 0.023397
GO:0033554 cellular response to stress 2.9% (2/69) 4.01 0.006966 0.023397
GO:0033588 Elongator holoenzyme complex 1.45% (1/69) 7.23 0.006622 0.023575
GO:0002097 tRNA wobble base modification 1.45% (1/69) 7.23 0.006622 0.023575
GO:0002098 tRNA wobble uridine modification 1.45% (1/69) 7.23 0.006622 0.023575
GO:0006281 DNA repair 2.9% (2/69) 4.11 0.006095 0.023585
GO:0008152 metabolic process 23.19% (16/69) 0.96 0.006354 0.024063
GO:0019538 protein metabolic process 13.04% (9/69) 1.37 0.007603 0.024166
GO:0097659 nucleic acid-templated transcription 2.9% (2/69) 3.95 0.007515 0.02432
GO:0006351 transcription, DNA-templated 2.9% (2/69) 3.95 0.007515 0.02432
GO:1901564 organonitrogen compound metabolic process 14.49% (10/69) 1.27 0.007921 0.024736
GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines 1.45% (1/69) 6.91 0.008271 0.025383
GO:0003713 transcription coactivator activity 1.45% (1/69) 6.65 0.009917 0.02942
GO:0032040 small-subunit processome 1.45% (1/69) 6.65 0.009917 0.02942
GO:0006950 response to stress 4.35% (3/69) 2.73 0.01056 0.030815
GO:0000105 histidine biosynthetic process 1.45% (1/69) 6.43 0.01156 0.031658
GO:0006547 histidine metabolic process 1.45% (1/69) 6.43 0.01156 0.031658
GO:0052803 imidazole-containing compound metabolic process 1.45% (1/69) 6.43 0.01156 0.031658
GO:0018130 heterocycle biosynthetic process 4.35% (3/69) 2.68 0.011747 0.031681
GO:0019438 aromatic compound biosynthetic process 4.35% (3/69) 2.69 0.011526 0.03309
GO:0032774 RNA biosynthetic process 2.9% (2/69) 3.43 0.015003 0.039272
GO:0030684 preribosome 1.45% (1/69) 6.07 0.014839 0.039423
GO:1901362 organic cyclic compound biosynthetic process 4.35% (3/69) 2.51 0.015885 0.040978
GO:0140056 organelle localization by membrane tethering 1.45% (1/69) 5.65 0.019737 0.045041
GO:0006904 vesicle docking involved in exocytosis 1.45% (1/69) 5.65 0.019737 0.045041
GO:0022406 membrane docking 1.45% (1/69) 5.65 0.019737 0.045041
GO:0140029 exocytic process 1.45% (1/69) 5.65 0.019737 0.045041
GO:0048278 vesicle docking 1.45% (1/69) 5.65 0.019737 0.045041
GO:0003697 single-stranded DNA binding 1.45% (1/69) 5.65 0.019737 0.045041
GO:0051640 organelle localization 1.45% (1/69) 5.65 0.019737 0.045041
GO:0006400 tRNA modification 1.45% (1/69) 5.53 0.021365 0.047536
GO:0003674 molecular_function 40.58% (28/69) 0.52 0.018869 0.047982
GO:0008150 biological_process 28.99% (20/69) 0.66 0.021304 0.048002
GO:0006259 DNA metabolic process 2.9% (2/69) 3.23 0.019288 0.048355
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_1 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_17 0.031 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_33 0.027 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_38 0.032 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_39 0.025 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_43 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_49 0.025 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_53 0.042 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_127 0.023 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_134 0.041 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_140 0.026 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_145 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_183 0.021 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_228 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_232 0.029 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_242 0.032 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_252 0.026 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_40 0.029 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_50 0.031 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_106 0.024 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_164 0.035 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_194 0.028 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_196 0.026 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_231 0.03 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_249 0.027 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_264 0.025 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_268 0.019 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_15 0.025 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_87 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_4 0.03 Archaeplastida Compare
Gingko biloba HCCA Cluster_29 0.025 Archaeplastida Compare
Gingko biloba HCCA Cluster_116 0.024 Archaeplastida Compare
Gingko biloba HCCA Cluster_129 0.029 Archaeplastida Compare
Gingko biloba HCCA Cluster_131 0.025 Archaeplastida Compare
Gingko biloba HCCA Cluster_184 0.028 Archaeplastida Compare
Gingko biloba HCCA Cluster_202 0.023 Archaeplastida Compare
Gingko biloba HCCA Cluster_228 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_235 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_264 0.02 Archaeplastida Compare
Gingko biloba HCCA Cluster_314 0.026 Archaeplastida Compare
Gingko biloba HCCA Cluster_327 0.024 Archaeplastida Compare
Gingko biloba HCCA Cluster_337 0.037 Archaeplastida Compare
Zea mays HCCA Cluster_6 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_137 0.042 Archaeplastida Compare
Zea mays HCCA Cluster_177 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_199 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_201 0.024 Archaeplastida Compare
Zea mays HCCA Cluster_350 0.028 Archaeplastida Compare
Zea mays HCCA Cluster_360 0.019 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_20 0.032 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_36 0.039 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_19 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_121 0.038 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_124 0.026 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_155 0.03 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_185 0.025 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_192 0.029 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_287 0.024 Archaeplastida Compare
Picea abies HCCA Cluster_19 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_82 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_84 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_93 0.029 Archaeplastida Compare
Picea abies HCCA Cluster_169 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_208 0.046 Archaeplastida Compare
Picea abies HCCA Cluster_236 0.024 Archaeplastida Compare
Picea abies HCCA Cluster_239 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_376 0.029 Archaeplastida Compare
Picea abies HCCA Cluster_398 0.025 Archaeplastida Compare
Picea abies HCCA Cluster_483 0.024 Archaeplastida Compare
Picea abies HCCA Cluster_520 0.025 Archaeplastida Compare
Oryza sativa HCCA Cluster_6 0.026 Archaeplastida Compare
Oryza sativa HCCA Cluster_109 0.062 Archaeplastida Compare
Oryza sativa HCCA Cluster_140 0.041 Archaeplastida Compare
Oryza sativa HCCA Cluster_146 0.026 Archaeplastida Compare
Oryza sativa HCCA Cluster_191 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_200 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_204 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_214 0.024 Archaeplastida Compare
Oryza sativa HCCA Cluster_242 0.031 Archaeplastida Compare
Oryza sativa HCCA Cluster_254 0.027 Archaeplastida Compare
Oryza sativa HCCA Cluster_257 0.026 Archaeplastida Compare
Oryza sativa HCCA Cluster_273 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_297 0.027 Archaeplastida Compare
Oryza sativa HCCA Cluster_318 0.025 Archaeplastida Compare
Oryza sativa HCCA Cluster_333 0.025 Archaeplastida Compare
Oryza sativa HCCA Cluster_336 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_347 0.041 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_9 0.02 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_130 0.029 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_192 0.023 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_26 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_32 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_75 0.037 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_86 0.023 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_105 0.022 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_124 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_142 0.029 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_158 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_207 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_219 0.026 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_222 0.029 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_237 0.023 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_251 0.026 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_264 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_283 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_22 0.023 Archaeplastida Compare
Vitis vinifera HCCA Cluster_46 0.021 Archaeplastida Compare
Vitis vinifera HCCA Cluster_60 0.026 Archaeplastida Compare
Vitis vinifera HCCA Cluster_69 0.032 Archaeplastida Compare
Vitis vinifera HCCA Cluster_83 0.026 Archaeplastida Compare
Vitis vinifera HCCA Cluster_87 0.031 Archaeplastida Compare
Vitis vinifera HCCA Cluster_132 0.023 Archaeplastida Compare
Vitis vinifera HCCA Cluster_143 0.032 Archaeplastida Compare
Vitis vinifera HCCA Cluster_172 0.021 Archaeplastida Compare
Vitis vinifera HCCA Cluster_236 0.019 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_25 0.025 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_100 0.023 Archaeplastida Compare
Sequences (69) (download table)

InterPro Domains

GO Terms

Family Terms