Coexpression cluster: Cluster_15 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0042575 DNA polymerase complex 2.78% (2/72) 9.17 3e-06 0.000466
GO:0043625 delta DNA polymerase complex 2.78% (2/72) 9.17 3e-06 0.000466
GO:0006260 DNA replication 4.17% (3/72) 5.85 2e-05 0.002053
GO:1902903 regulation of supramolecular fiber organization 2.78% (2/72) 6.71 0.000161 0.00267
GO:0032970 regulation of actin filament-based process 2.78% (2/72) 6.71 0.000161 0.00267
GO:0032956 regulation of actin cytoskeleton organization 2.78% (2/72) 6.71 0.000161 0.00267
GO:0032535 regulation of cellular component size 2.78% (2/72) 6.71 0.000161 0.00267
GO:0110053 regulation of actin filament organization 2.78% (2/72) 6.71 0.000161 0.00267
GO:0032271 regulation of protein polymerization 2.78% (2/72) 6.71 0.000161 0.00267
GO:0008064 regulation of actin polymerization or depolymerization 2.78% (2/72) 6.71 0.000161 0.00267
GO:0030833 regulation of actin filament polymerization 2.78% (2/72) 6.71 0.000161 0.00267
GO:0030832 regulation of actin filament length 2.78% (2/72) 6.71 0.000161 0.00267
GO:0090066 regulation of anatomical structure size 2.78% (2/72) 6.71 0.000161 0.00267
GO:0051493 regulation of cytoskeleton organization 2.78% (2/72) 6.71 0.000161 0.00267
GO:0043254 regulation of protein complex assembly 2.78% (2/72) 6.71 0.000161 0.00267
GO:0044446 intracellular organelle part 8.33% (6/72) 3.24 4.3e-05 0.002737
GO:0044422 organelle part 8.33% (6/72) 3.24 4.3e-05 0.002737
GO:0044087 regulation of cellular component biogenesis 2.78% (2/72) 6.59 0.000193 0.00304
GO:0006259 DNA metabolic process 5.56% (4/72) 4.17 7.5e-05 0.003936
GO:0061695 transferase complex, transferring phosphorus-containing groups 2.78% (2/72) 6.37 0.000266 0.003983
GO:0033043 regulation of organelle organization 2.78% (2/72) 6.09 0.000395 0.005663
GO:0044454 nuclear chromosome part 2.78% (2/72) 6.85 0.000132 0.005935
GO:0044427 chromosomal part 4.17% (3/72) 4.3 0.000492 0.006734
GO:0051128 regulation of cellular component organization 2.78% (2/72) 5.78 0.000608 0.00798
GO:0044428 nuclear part 4.17% (3/72) 4.03 0.000845 0.010651
GO:0008290 F-actin capping protein complex 1.39% (1/72) 9.17 0.001732 0.012398
GO:2001020 regulation of response to DNA damage stimulus 1.39% (1/72) 9.17 0.001732 0.012398
GO:0030837 negative regulation of actin filament polymerization 1.39% (1/72) 9.17 0.001732 0.012398
GO:0080135 regulation of cellular response to stress 1.39% (1/72) 9.17 0.001732 0.012398
GO:0008154 actin polymerization or depolymerization 1.39% (1/72) 9.17 0.001732 0.012398
GO:1901880 negative regulation of protein depolymerization 1.39% (1/72) 9.17 0.001732 0.012398
GO:1902904 negative regulation of supramolecular fiber organization 1.39% (1/72) 9.17 0.001732 0.012398
GO:0006282 regulation of DNA repair 1.39% (1/72) 9.17 0.001732 0.012398
GO:0051494 negative regulation of cytoskeleton organization 1.39% (1/72) 9.17 0.001732 0.012398
GO:0043242 negative regulation of protein complex disassembly 1.39% (1/72) 9.17 0.001732 0.012398
GO:0051693 actin filament capping 1.39% (1/72) 9.17 0.001732 0.012398
GO:0051016 barbed-end actin filament capping 1.39% (1/72) 9.17 0.001732 0.012398
GO:0032272 negative regulation of protein polymerization 1.39% (1/72) 9.17 0.001732 0.012398
GO:0031333 negative regulation of protein complex assembly 1.39% (1/72) 9.17 0.001732 0.012398
GO:0051258 protein polymerization 1.39% (1/72) 9.17 0.001732 0.012398
GO:0030835 negative regulation of actin filament depolymerization 1.39% (1/72) 9.17 0.001732 0.012398
GO:0030834 regulation of actin filament depolymerization 1.39% (1/72) 9.17 0.001732 0.012398
GO:1901879 regulation of protein depolymerization 1.39% (1/72) 9.17 0.001732 0.012398
GO:0030041 actin filament polymerization 1.39% (1/72) 9.17 0.001732 0.012398
GO:0044430 cytoskeletal part 2.78% (2/72) 4.89 0.002102 0.014717
GO:0065008 regulation of biological quality 2.78% (2/72) 4.47 0.003708 0.025392
GO:0032991 protein-containing complex 8.33% (6/72) 1.99 0.004042 0.027091
GO:0043226 organelle 6.94% (5/72) 2.21 0.00462 0.029699
GO:0043229 intracellular organelle 6.94% (5/72) 2.21 0.00462 0.029699
GO:1990234 transferase complex 2.78% (2/72) 4.22 0.005229 0.02995
GO:0080134 regulation of response to stress 1.39% (1/72) 7.59 0.005186 0.030254
GO:0051129 negative regulation of cellular component organization 1.39% (1/72) 7.59 0.005186 0.030254
GO:0010639 negative regulation of organelle organization 1.39% (1/72) 7.59 0.005186 0.030254
GO:0000808 origin recognition complex 1.39% (1/72) 7.59 0.005186 0.030254
GO:0006139 nucleobase-containing compound metabolic process 6.94% (5/72) 2.19 0.004872 0.030696
GO:0044424 intracellular part 9.72% (7/72) 1.67 0.006488 0.036494
GO:0043244 regulation of protein complex disassembly 1.39% (1/72) 7.17 0.006909 0.036889
GO:0015629 actin cytoskeleton 1.39% (1/72) 7.17 0.006909 0.036889
GO:0051052 regulation of DNA metabolic process 1.39% (1/72) 7.17 0.006909 0.036889
GO:0006659 phosphatidylserine biosynthetic process 1.39% (1/72) 6.85 0.008629 0.040571
GO:0006658 phosphatidylserine metabolic process 1.39% (1/72) 6.85 0.008629 0.040571
GO:0017056 structural constituent of nuclear pore 1.39% (1/72) 6.85 0.008629 0.040571
GO:0016043 cellular component organization 4.17% (3/72) 2.89 0.00789 0.041424
GO:0044464 cell part 9.72% (7/72) 1.61 0.008037 0.041503
GO:0005575 cellular_component 15.28% (11/72) 1.18 0.008611 0.042382
GO:0046483 heterocycle metabolic process 6.94% (5/72) 2.0 0.008377 0.042562
GO:0006725 cellular aromatic compound metabolic process 6.94% (5/72) 1.99 0.008567 0.042835
GO:1901360 organic cyclic compound metabolic process 6.94% (5/72) 1.95 0.009613 0.043887
GO:0090304 nucleic acid metabolic process 5.56% (4/72) 2.28 0.009529 0.04414
GO:0005634 nucleus 4.17% (3/72) 2.73 0.010607 0.047731
GO:0071840 cellular component organization or biogenesis 4.17% (3/72) 2.71 0.010938 0.048528
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_58 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_68 0.024 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_80 0.024 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_81 0.026 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_119 0.026 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_137 0.026 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_169 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_200 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_242 0.031 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_254 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_268 0.021 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_281 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_39 0.023 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_60 0.036 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_171 0.022 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_196 0.02 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_226 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_234 0.02 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_245 0.041 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_56 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_22 0.021 Archaeplastida Compare
Gingko biloba HCCA Cluster_169 0.021 Archaeplastida Compare
Gingko biloba HCCA Cluster_214 0.02 Archaeplastida Compare
Gingko biloba HCCA Cluster_310 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_1 0.03 Archaeplastida Compare
Zea mays HCCA Cluster_12 0.024 Archaeplastida Compare
Zea mays HCCA Cluster_49 0.025 Archaeplastida Compare
Zea mays HCCA Cluster_75 0.034 Archaeplastida Compare
Zea mays HCCA Cluster_258 0.025 Archaeplastida Compare
Zea mays HCCA Cluster_270 0.035 Archaeplastida Compare
Zea mays HCCA Cluster_330 0.024 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_61 0.02 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_100 0.021 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_22 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_135 0.021 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_281 0.025 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_284 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_115 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_124 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_128 0.028 Archaeplastida Compare
Picea abies HCCA Cluster_194 0.031 Archaeplastida Compare
Picea abies HCCA Cluster_270 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_313 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_379 0.033 Archaeplastida Compare
Picea abies HCCA Cluster_393 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_517 0.026 Archaeplastida Compare
Picea abies HCCA Cluster_528 0.024 Archaeplastida Compare
Picea abies HCCA Cluster_531 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_538 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_12 0.024 Archaeplastida Compare
Oryza sativa HCCA Cluster_74 0.042 Archaeplastida Compare
Oryza sativa HCCA Cluster_103 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_143 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_158 0.029 Archaeplastida Compare
Oryza sativa HCCA Cluster_173 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_176 0.029 Archaeplastida Compare
Oryza sativa HCCA Cluster_192 0.025 Archaeplastida Compare
Oryza sativa HCCA Cluster_206 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_215 0.024 Archaeplastida Compare
Oryza sativa HCCA Cluster_242 0.03 Archaeplastida Compare
Oryza sativa HCCA Cluster_323 0.023 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_30 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_60 0.023 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_77 0.028 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_104 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_137 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_158 0.024 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_180 0.027 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_198 0.034 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_226 0.023 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_250 0.03 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_263 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_275 0.024 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_279 0.025 Archaeplastida Compare
Vitis vinifera HCCA Cluster_53 0.027 Archaeplastida Compare
Vitis vinifera HCCA Cluster_68 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_82 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_114 0.024 Archaeplastida Compare
Vitis vinifera HCCA Cluster_164 0.035 Archaeplastida Compare
Vitis vinifera HCCA Cluster_193 0.037 Archaeplastida Compare
Vitis vinifera HCCA Cluster_208 0.025 Archaeplastida Compare
Vitis vinifera HCCA Cluster_220 0.028 Archaeplastida Compare
Vitis vinifera HCCA Cluster_226 0.026 Archaeplastida Compare
Vitis vinifera HCCA Cluster_236 0.019 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_163 0.026 Archaeplastida Compare
Sequences (72) (download table)

InterPro Domains

GO Terms

Family Terms