Coexpression cluster: Cluster_180 (HCCA)

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:1901360 organic cyclic compound metabolic process 12.04% (13/108) 2.74 0.0 9e-06
GO:0046483 heterocycle metabolic process 12.04% (13/108) 2.79 0.0 1.3e-05
GO:0042727 flavin-containing compound biosynthetic process 2.78% (3/108) 7.17 1e-06 3.2e-05
GO:0042726 flavin-containing compound metabolic process 2.78% (3/108) 7.17 1e-06 3.2e-05
GO:0006771 riboflavin metabolic process 2.78% (3/108) 7.17 1e-06 3.2e-05
GO:0009231 riboflavin biosynthetic process 2.78% (3/108) 7.17 1e-06 3.2e-05
GO:0090304 nucleic acid metabolic process 9.26% (10/108) 3.01 1e-06 4e-05
GO:0016853 isomerase activity 5.56% (6/108) 3.88 4e-06 9.6e-05
GO:0034641 cellular nitrogen compound metabolic process 12.04% (13/108) 2.26 3e-06 0.000101
GO:0009982 pseudouridine synthase activity 2.78% (3/108) 6.27 8e-06 0.000119
GO:0006767 water-soluble vitamin metabolic process 2.78% (3/108) 6.27 8e-06 0.000119
GO:0042364 water-soluble vitamin biosynthetic process 2.78% (3/108) 6.27 8e-06 0.000119
GO:0006766 vitamin metabolic process 2.78% (3/108) 6.27 8e-06 0.000119
GO:0009110 vitamin biosynthetic process 2.78% (3/108) 6.27 8e-06 0.000119
GO:0006139 nucleobase-containing compound metabolic process 9.26% (10/108) 2.6 6e-06 0.000149
GO:0001522 pseudouridine synthesis 2.78% (3/108) 6.0 1.4e-05 0.000199
GO:0006725 cellular aromatic compound metabolic process 9.26% (10/108) 2.41 2.1e-05 0.000285
GO:0003723 RNA binding 6.48% (7/108) 3.03 2.6e-05 0.000341
GO:0016070 RNA metabolic process 6.48% (7/108) 2.94 3.9e-05 0.000487
GO:0016866 intramolecular transferase activity 2.78% (3/108) 5.27 6.6e-05 0.000773
GO:0003676 nucleic acid binding 13.89% (15/108) 1.67 7.3e-05 0.000817
GO:0009451 RNA modification 2.78% (3/108) 5.09 9.6e-05 0.001027
GO:0003916 DNA topoisomerase activity 1.85% (2/108) 6.42 0.000238 0.002329
GO:0006265 DNA topological change 1.85% (2/108) 6.42 0.000238 0.002329
GO:0071103 DNA conformation change 1.85% (2/108) 6.27 0.000297 0.00279
GO:0140097 catalytic activity, acting on DNA 2.78% (3/108) 4.45 0.000363 0.003284
GO:0097159 organic cyclic compound binding 21.3% (23/108) 1.08 0.000395 0.003317
GO:1901363 heterocyclic compound binding 21.3% (23/108) 1.08 0.000395 0.003317
GO:0006807 nitrogen compound metabolic process 16.67% (18/108) 1.24 0.000559 0.004526
GO:0004518 nuclease activity 2.78% (3/108) 4.09 0.000756 0.005918
GO:0005488 binding 28.7% (31/108) 0.81 0.000894 0.006776
GO:0044281 small molecule metabolic process 5.56% (6/108) 2.37 0.001123 0.008245
GO:0051276 chromosome organization 1.85% (2/108) 5.27 0.001232 0.008773
GO:0044283 small molecule biosynthetic process 3.7% (4/108) 3.08 0.001336 0.009232
GO:0003824 catalytic activity 25.93% (28/108) 0.82 0.001623 0.010899
GO:0005525 GTP binding 3.7% (4/108) 2.9 0.002099 0.011743
GO:0032549 ribonucleoside binding 3.7% (4/108) 2.9 0.002099 0.011743
GO:0032550 purine ribonucleoside binding 3.7% (4/108) 2.9 0.002099 0.011743
GO:0032561 guanyl ribonucleotide binding 3.7% (4/108) 2.9 0.002099 0.011743
GO:0001882 nucleoside binding 3.7% (4/108) 2.9 0.002099 0.011743
GO:0001883 purine nucleoside binding 3.7% (4/108) 2.9 0.002099 0.011743
GO:0016779 nucleotidyltransferase activity 2.78% (3/108) 3.53 0.002295 0.01226
GO:0019001 guanyl nucleotide binding 3.7% (4/108) 2.87 0.00225 0.012296
GO:0003674 molecular_function 41.67% (45/108) 0.56 0.001954 0.012757
GO:0003919 FMN adenylyltransferase activity 0.93% (1/108) 8.59 0.002598 0.013271
GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity 0.93% (1/108) 8.59 0.002598 0.013271
GO:0071704 organic substance metabolic process 17.59% (19/108) 0.96 0.003517 0.017584
GO:0006259 DNA metabolic process 2.78% (3/108) 3.17 0.004599 0.022514
GO:0008837 diaminopimelate epimerase activity 0.93% (1/108) 7.59 0.005189 0.024386
GO:0047661 amino-acid racemase activity 0.93% (1/108) 7.59 0.005189 0.024386
GO:0017144 drug metabolic process 2.78% (3/108) 3.1 0.005331 0.024567
GO:0006396 RNA processing 2.78% (3/108) 2.99 0.006494 0.028794
GO:0018130 heterocycle biosynthetic process 3.7% (4/108) 2.44 0.006475 0.029261
GO:0140098 catalytic activity, acting on RNA 2.78% (3/108) 2.9 0.007796 0.030536
GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives 0.93% (1/108) 7.0 0.007773 0.03096
GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity 0.93% (1/108) 7.0 0.007773 0.03096
GO:0036361 racemase activity, acting on amino acids and derivatives 0.93% (1/108) 7.0 0.007773 0.03096
GO:0017150 tRNA dihydrouridine synthase activity 0.93% (1/108) 7.0 0.007773 0.03096
GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity 0.93% (1/108) 7.0 0.007773 0.03096
GO:0008152 metabolic process 20.37% (22/108) 0.77 0.008109 0.031239
GO:0044237 cellular metabolic process 14.81% (16/108) 0.97 0.007236 0.031488
GO:0043168 anion binding 11.11% (12/108) 1.13 0.008696 0.03296
GO:0006996 organelle organization 1.85% (2/108) 3.81 0.009076 0.033855
GO:0036094 small molecule binding 11.11% (12/108) 1.11 0.009562 0.034572
GO:0046451 diaminopimelate metabolic process 0.93% (1/108) 6.59 0.010351 0.034748
GO:0009085 lysine biosynthetic process 0.93% (1/108) 6.59 0.010351 0.034748
GO:0006553 lysine metabolic process 0.93% (1/108) 6.59 0.010351 0.034748
GO:0009089 lysine biosynthetic process via diaminopimelate 0.93% (1/108) 6.59 0.010351 0.034748
GO:1901362 organic cyclic compound biosynthetic process 3.7% (4/108) 2.28 0.009558 0.035094
GO:0034470 ncRNA processing 1.85% (2/108) 3.73 0.010052 0.035791
GO:0008238 exopeptidase activity 1.85% (2/108) 3.61 0.011777 0.03898
GO:0061505 DNA topoisomerase II activity 0.93% (1/108) 6.27 0.012922 0.041597
GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity 0.93% (1/108) 6.27 0.012922 0.041597
GO:0016854 racemase and epimerase activity 0.93% (1/108) 6.0 0.015486 0.046656
GO:0008094 DNA-dependent ATPase activity 0.93% (1/108) 6.0 0.015486 0.046656
GO:0016742 hydroxymethyl-, formyl- and related transferase activity 0.93% (1/108) 6.0 0.015486 0.046656
GO:0043648 dicarboxylic acid metabolic process 0.93% (1/108) 6.0 0.015486 0.046656
GO:0006013 mannose metabolic process 0.93% (1/108) 6.0 0.015486 0.046656
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_17 0.099 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_34 0.024 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_76 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_86 0.028 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_135 0.025 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_149 0.084 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_162 0.021 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_247 0.042 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_52 0.026 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_153 0.024 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_204 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_225 0.038 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_231 0.03 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_235 0.028 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_246 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_248 0.028 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_249 0.022 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_257 0.032 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_264 0.026 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_105 0.021 Archaeplastida Compare
Gingko biloba HCCA Cluster_135 0.027 Archaeplastida Compare
Gingko biloba HCCA Cluster_151 0.047 Archaeplastida Compare
Gingko biloba HCCA Cluster_177 0.021 Archaeplastida Compare
Gingko biloba HCCA Cluster_202 0.05 Archaeplastida Compare
Gingko biloba HCCA Cluster_245 0.026 Archaeplastida Compare
Gingko biloba HCCA Cluster_302 0.021 Archaeplastida Compare
Gingko biloba HCCA Cluster_327 0.045 Archaeplastida Compare
Gingko biloba HCCA Cluster_337 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_39 0.031 Archaeplastida Compare
Zea mays HCCA Cluster_199 0.055 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_16 0.026 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_41 0.021 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_65 0.035 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_110 0.021 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_114 0.023 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_145 0.025 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_19 0.035 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_20 0.064 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_53 0.025 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_59 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_129 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_191 0.021 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_221 0.026 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_237 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_241 0.03 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_256 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_35 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_48 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_51 0.039 Archaeplastida Compare
Picea abies HCCA Cluster_88 0.053 Archaeplastida Compare
Picea abies HCCA Cluster_227 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_238 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_269 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_321 0.026 Archaeplastida Compare
Picea abies HCCA Cluster_341 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_354 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_359 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_362 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_472 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_516 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_520 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_90 0.034 Archaeplastida Compare
Oryza sativa HCCA Cluster_114 0.086 Archaeplastida Compare
Oryza sativa HCCA Cluster_120 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_139 0.068 Archaeplastida Compare
Oryza sativa HCCA Cluster_188 0.029 Archaeplastida Compare
Oryza sativa HCCA Cluster_214 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_218 0.035 Archaeplastida Compare
Oryza sativa HCCA Cluster_256 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_308 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_327 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_360 0.02 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_9 0.027 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_36 0.023 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_100 0.03 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_106 0.023 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_173 0.023 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_175 0.021 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_191 0.023 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_32 0.051 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_33 0.033 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_75 0.03 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_102 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_119 0.028 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_125 0.05 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_160 0.037 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_202 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_211 0.051 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_216 0.026 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_219 0.027 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_253 0.037 Archaeplastida Compare
Vitis vinifera HCCA Cluster_35 0.027 Archaeplastida Compare
Vitis vinifera HCCA Cluster_52 0.026 Archaeplastida Compare
Vitis vinifera HCCA Cluster_72 0.051 Archaeplastida Compare
Vitis vinifera HCCA Cluster_143 0.031 Archaeplastida Compare
Vitis vinifera HCCA Cluster_152 0.024 Archaeplastida Compare
Vitis vinifera HCCA Cluster_155 0.058 Archaeplastida Compare
Vitis vinifera HCCA Cluster_162 0.026 Archaeplastida Compare
Vitis vinifera HCCA Cluster_178 0.024 Archaeplastida Compare
Vitis vinifera HCCA Cluster_201 0.02 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_22 0.029 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_32 0.019 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_56 0.02 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_60 0.021 Archaeplastida Compare
Sequences (108) (download table)

InterPro Domains

GO Terms

Family Terms