Coexpression cluster: Cluster_135 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0009507 chloroplast 78.87% (56/71) 2.54 0.0 0.0
GO:0009536 plastid 78.87% (56/71) 2.52 0.0 0.0
GO:0044444 cytoplasmic part 87.32% (62/71) 1.33 0.0 0.0
GO:0031163 metallo-sulfur cluster assembly 15.49% (11/71) 5.44 0.0 0.0
GO:0016226 iron-sulfur cluster assembly 15.49% (11/71) 5.44 0.0 0.0
GO:0044435 plastid part 32.39% (23/71) 2.85 0.0 0.0
GO:0006399 tRNA metabolic process 14.08% (10/71) 5.17 0.0 0.0
GO:0072596 establishment of protein localization to chloroplast 12.68% (9/71) 5.63 0.0 0.0
GO:0072598 protein localization to chloroplast 12.68% (9/71) 5.63 0.0 0.0
GO:0045036 protein targeting to chloroplast 12.68% (9/71) 5.63 0.0 0.0
GO:0016070 RNA metabolic process 32.39% (23/71) 2.69 0.0 0.0
GO:0009658 chloroplast organization 16.9% (12/71) 4.32 0.0 0.0
GO:0009657 plastid organization 18.31% (13/71) 4.06 0.0 0.0
GO:0044434 chloroplast part 29.58% (21/71) 2.76 0.0 0.0
GO:0034660 ncRNA metabolic process 18.31% (13/71) 3.86 0.0 0.0
GO:0006725 cellular aromatic compound metabolic process 43.66% (31/71) 1.86 0.0 0.0
GO:0090304 nucleic acid metabolic process 33.8% (24/71) 2.22 0.0 0.0
GO:0046483 heterocycle metabolic process 40.85% (29/71) 1.9 0.0 0.0
GO:1901360 organic cyclic compound metabolic process 43.66% (31/71) 1.79 0.0 0.0
GO:0051186 cofactor metabolic process 23.94% (17/71) 2.84 0.0 0.0
GO:0008654 phospholipid biosynthetic process 16.9% (12/71) 3.6 0.0 0.0
GO:0009073 aromatic amino acid family biosynthetic process 11.27% (8/71) 4.91 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 40.85% (29/71) 1.82 0.0 0.0
GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway 14.08% (10/71) 4.09 0.0 0.0
GO:0022607 cellular component assembly 21.13% (15/71) 3.01 0.0 0.0
GO:0009240 isopentenyl diphosphate biosynthetic process 14.08% (10/71) 4.07 0.0 0.0
GO:0046490 isopentenyl diphosphate metabolic process 14.08% (10/71) 4.07 0.0 0.0
GO:0006364 rRNA processing 14.08% (10/71) 4.06 0.0 0.0
GO:0006644 phospholipid metabolic process 16.9% (12/71) 3.52 0.0 0.0
GO:0016072 rRNA metabolic process 14.08% (10/71) 4.04 0.0 0.0
GO:0009941 chloroplast envelope 18.31% (13/71) 3.24 0.0 0.0
GO:0009526 plastid envelope 18.31% (13/71) 3.23 0.0 0.0
GO:0034470 ncRNA processing 14.08% (10/71) 3.86 0.0 0.0
GO:0006139 nucleobase-containing compound metabolic process 35.21% (25/71) 1.89 0.0 0.0
GO:0031967 organelle envelope 18.31% (13/71) 3.07 0.0 0.0
GO:0031975 envelope 18.31% (13/71) 3.07 0.0 0.0
GO:0044237 cellular metabolic process 57.75% (41/71) 1.18 0.0 0.0
GO:0009790 embryo development 16.9% (12/71) 3.15 0.0 0.0
GO:0009793 embryo development ending in seed dormancy 16.9% (12/71) 3.15 0.0 0.0
GO:0009072 aromatic amino acid family metabolic process 12.68% (9/71) 3.87 0.0 0.0
GO:0019682 glyceraldehyde-3-phosphate metabolic process 14.08% (10/71) 3.57 0.0 0.0
GO:0019752 carboxylic acid metabolic process 28.17% (20/71) 2.09 0.0 0.0
GO:0044281 small molecule metabolic process 33.8% (24/71) 1.79 0.0 0.0
GO:0009532 plastid stroma 16.9% (12/71) 2.99 0.0 0.0
GO:0009570 chloroplast stroma 16.9% (12/71) 2.99 0.0 0.0
GO:0006082 organic acid metabolic process 28.17% (20/71) 2.01 0.0 1e-06
GO:0043436 oxoacid metabolic process 28.17% (20/71) 2.01 0.0 1e-06
GO:0044424 intracellular part 95.77% (68/71) 0.45 0.0 1e-06
GO:0090407 organophosphate biosynthetic process 19.72% (14/71) 2.58 0.0 1e-06
GO:0043231 intracellular membrane-bounded organelle 88.73% (63/71) 0.56 0.0 1e-06
GO:0044422 organelle part 35.21% (25/71) 1.65 0.0 1e-06
GO:0044446 intracellular organelle part 35.21% (25/71) 1.65 0.0 1e-06
GO:0043227 membrane-bounded organelle 88.73% (63/71) 0.56 0.0 1e-06
GO:0008152 metabolic process 59.15% (42/71) 1.04 0.0 1e-06
GO:0006090 pyruvate metabolic process 14.08% (10/71) 3.23 0.0 1e-06
GO:0044249 cellular biosynthetic process 38.03% (27/71) 1.53 0.0 1e-06
GO:0006520 cellular amino acid metabolic process 16.9% (12/71) 2.8 0.0 1e-06
GO:0006081 cellular aldehyde metabolic process 14.08% (10/71) 3.19 0.0 1e-06
GO:0043229 intracellular organelle 88.73% (63/71) 0.55 0.0 2e-06
GO:0043226 organelle 88.73% (63/71) 0.55 0.0 2e-06
GO:0006790 sulfur compound metabolic process 16.9% (12/71) 2.73 0.0 2e-06
GO:0016043 cellular component organization 32.39% (23/71) 1.69 0.0 2e-06
GO:0019438 aromatic compound biosynthetic process 22.54% (16/71) 2.14 0.0 4e-06
GO:0016556 mRNA modification 8.45% (6/71) 4.34 1e-06 5e-06
GO:0006807 nitrogen compound metabolic process 45.07% (32/71) 1.22 1e-06 7e-06
GO:0010027 thylakoid membrane organization 9.86% (7/71) 3.79 1e-06 7e-06
GO:0009668 plastid membrane organization 9.86% (7/71) 3.79 1e-06 7e-06
GO:1901576 organic substance biosynthetic process 38.03% (27/71) 1.41 1e-06 7e-06
GO:0071840 cellular component organization or biogenesis 32.39% (23/71) 1.58 1e-06 8e-06
GO:0042372 phylloquinone biosynthetic process 4.23% (3/71) 7.19 1e-06 8e-06
GO:0042374 phylloquinone metabolic process 4.23% (3/71) 7.19 1e-06 8e-06
GO:0019637 organophosphate metabolic process 19.72% (14/71) 2.25 1e-06 9e-06
GO:0061024 membrane organization 9.86% (7/71) 3.7 1e-06 1e-05
GO:0008610 lipid biosynthetic process 18.31% (13/71) 2.36 1e-06 1e-05
GO:0071704 organic substance metabolic process 53.52% (38/71) 1.01 1e-06 1.1e-05
GO:0009058 biosynthetic process 38.03% (27/71) 1.36 1e-06 1.1e-05
GO:0010103 stomatal complex morphogenesis 8.45% (6/71) 4.06 2e-06 1.3e-05
GO:0090626 plant epidermis morphogenesis 8.45% (6/71) 4.06 2e-06 1.3e-05
GO:0044238 primary metabolic process 49.3% (35/71) 1.07 2e-06 1.5e-05
GO:0007275 multicellular organism development 16.9% (12/71) 2.42 2e-06 1.7e-05
GO:0072594 establishment of protein localization to organelle 12.68% (9/71) 2.91 3e-06 2.4e-05
GO:0033365 protein localization to organelle 12.68% (9/71) 2.9 3e-06 2.4e-05
GO:0009987 cellular process 61.97% (44/71) 0.82 3e-06 2.4e-05
GO:1901362 organic cyclic compound biosynthetic process 22.54% (16/71) 1.92 3e-06 2.5e-05
GO:0006996 organelle organization 19.72% (14/71) 2.09 4e-06 2.9e-05
GO:0031328 positive regulation of cellular biosynthetic process 12.68% (9/71) 2.85 4e-06 3e-05
GO:0006396 RNA processing 15.49% (11/71) 2.46 5e-06 3.4e-05
GO:0051173 positive regulation of nitrogen compound metabolic process 12.68% (9/71) 2.82 5e-06 3.5e-05
GO:0043170 macromolecule metabolic process 39.44% (28/71) 1.21 6e-06 4.3e-05
GO:0031325 positive regulation of cellular metabolic process 12.68% (9/71) 2.78 6e-06 4.3e-05
GO:0044255 cellular lipid metabolic process 18.31% (13/71) 2.13 7e-06 4.7e-05
GO:0044464 cell part 95.77% (68/71) 0.31 1.7e-05 0.000119
GO:0009891 positive regulation of biosynthetic process 12.68% (9/71) 2.58 1.9e-05 0.000128
GO:1903508 positive regulation of nucleic acid-templated transcription 11.27% (8/71) 2.79 2.1e-05 0.000132
GO:0045893 positive regulation of transcription, DNA-templated 11.27% (8/71) 2.79 2.1e-05 0.000132
GO:0051254 positive regulation of RNA metabolic process 11.27% (8/71) 2.79 2.1e-05 0.000132
GO:1902680 positive regulation of RNA biosynthetic process 11.27% (8/71) 2.79 2.1e-05 0.000132
GO:0006655 phosphatidylglycerol biosynthetic process 5.63% (4/71) 4.63 2.1e-05 0.000133
GO:0008652 cellular amino acid biosynthetic process 11.27% (8/71) 2.78 2.1e-05 0.000133
GO:0009451 RNA modification 9.86% (7/71) 3.07 2e-05 0.000135
GO:0046471 phosphatidylglycerol metabolic process 5.63% (4/71) 4.61 2.3e-05 0.00014
GO:0045935 positive regulation of nucleobase-containing compound metabolic process 11.27% (8/71) 2.74 2.5e-05 0.000156
GO:0010628 positive regulation of gene expression 11.27% (8/71) 2.71 2.9e-05 0.000179
GO:0010557 positive regulation of macromolecule biosynthetic process 11.27% (8/71) 2.7 3.1e-05 0.000182
GO:0009893 positive regulation of metabolic process 12.68% (9/71) 2.49 3e-05 0.000183
GO:0016071 mRNA metabolic process 9.86% (7/71) 2.97 3.1e-05 0.000184
GO:0042793 plastid transcription 5.63% (4/71) 4.46 3.4e-05 0.000199
GO:1901566 organonitrogen compound biosynthetic process 19.72% (14/71) 1.8 3.8e-05 0.000217
GO:0006629 lipid metabolic process 18.31% (13/71) 1.9 3.8e-05 0.000218
GO:0010604 positive regulation of macromolecule metabolic process 11.27% (8/71) 2.63 4.4e-05 0.000248
GO:0048481 plant ovule development 7.04% (5/71) 3.69 4.4e-05 0.00025
GO:0016874 ligase activity 7.04% (5/71) 3.56 6.7e-05 0.000377
GO:0010207 photosystem II assembly 7.04% (5/71) 3.47 9.1e-05 0.000507
GO:1901135 carbohydrate derivative metabolic process 15.49% (11/71) 1.96 0.000108 0.000592
GO:0090698 post-embryonic plant morphogenesis 8.45% (6/71) 2.97 0.000121 0.000636
GO:0006766 vitamin metabolic process 5.63% (4/71) 3.99 0.00012 0.000638
GO:0006605 protein targeting 12.68% (9/71) 2.23 0.000119 0.000639
GO:1901663 quinone biosynthetic process 4.23% (3/71) 4.98 0.000118 0.00064
GO:1901661 quinone metabolic process 4.23% (3/71) 4.98 0.000118 0.00064
GO:0042181 ketone biosynthetic process 4.23% (3/71) 4.94 0.000128 0.00067
GO:0048522 positive regulation of cellular process 12.68% (9/71) 2.19 0.000148 0.000769
GO:0018130 heterocycle biosynthetic process 15.49% (11/71) 1.89 0.000171 0.000881
GO:0044283 small molecule biosynthetic process 16.9% (12/71) 1.77 0.00018 0.00092
GO:0006796 phosphate-containing compound metabolic process 19.72% (14/71) 1.58 0.00019 0.00096
GO:0032501 multicellular organismal process 19.72% (14/71) 1.57 0.000211 0.00106
GO:0006793 phosphorus metabolic process 19.72% (14/71) 1.56 0.000215 0.001069
GO:0044271 cellular nitrogen compound biosynthetic process 16.9% (12/71) 1.73 0.000226 0.001117
GO:0043039 tRNA aminoacylation 4.23% (3/71) 4.64 0.000242 0.001152
GO:0004812 aminoacyl-tRNA ligase activity 4.23% (3/71) 4.64 0.000242 0.001152
GO:0043038 amino acid activation 4.23% (3/71) 4.64 0.000242 0.001152
GO:0016875 ligase activity, forming carbon-oxygen bonds 4.23% (3/71) 4.64 0.000242 0.001152
GO:0006418 tRNA aminoacylation for protein translation 4.23% (3/71) 4.64 0.000242 0.001152
GO:0034613 cellular protein localization 12.68% (9/71) 2.07 0.000274 0.001291
GO:0032502 developmental process 28.17% (20/71) 1.17 0.00034 0.001591
GO:0070727 cellular macromolecule localization 12.68% (9/71) 2.01 0.000373 0.001733
GO:0009110 vitamin biosynthetic process 4.23% (3/71) 4.36 0.00043 0.00198
GO:0032787 monocarboxylic acid metabolic process 15.49% (11/71) 1.71 0.000478 0.002189
GO:0006886 intracellular protein transport 12.68% (9/71) 1.96 0.000485 0.002203
GO:0051649 establishment of localization in cell 14.08% (10/71) 1.8 0.000558 0.002517
GO:0045184 establishment of protein localization 12.68% (9/71) 1.89 0.000672 0.002988
GO:0015031 protein transport 12.68% (9/71) 1.89 0.000672 0.002988
GO:0008104 protein localization 12.68% (9/71) 1.88 0.00073 0.003222
GO:0048518 positive regulation of biological process 12.68% (9/71) 1.83 0.000941 0.004126
GO:0009508 plastid chromosome 2.82% (2/71) 5.44 0.000968 0.004187
GO:0000229 cytoplasmic chromosome 2.82% (2/71) 5.44 0.000968 0.004187
GO:0140101 catalytic activity, acting on a tRNA 4.23% (3/71) 3.94 0.000997 0.00428
GO:0032774 RNA biosynthetic process 7.04% (5/71) 2.69 0.001086 0.0046
GO:0046474 glycerophospholipid biosynthetic process 5.63% (4/71) 3.15 0.001082 0.004615
GO:0097659 nucleic acid-templated transcription 5.63% (4/71) 3.15 0.001105 0.004619
GO:0006351 transcription, DNA-templated 5.63% (4/71) 3.15 0.001105 0.004619
GO:0051641 cellular localization 14.08% (10/71) 1.67 0.001114 0.004628
GO:0033036 macromolecule localization 12.68% (9/71) 1.79 0.001144 0.004719
GO:0046907 intracellular transport 12.68% (9/71) 1.77 0.001241 0.005086
GO:0006650 glycerophospholipid metabolic process 5.63% (4/71) 3.07 0.001355 0.005515
GO:0015833 peptide transport 12.68% (9/71) 1.74 0.001446 0.00585
GO:0045017 glycerolipid biosynthetic process 5.63% (4/71) 3.04 0.001465 0.005887
GO:0042886 amide transport 12.68% (9/71) 1.73 0.001524 0.006084
GO:0009579 thylakoid 7.04% (5/71) 2.57 0.001542 0.00612
GO:0046486 glycerolipid metabolic process 5.63% (4/71) 2.92 0.001968 0.007759
GO:0048856 anatomical structure development 16.9% (12/71) 1.37 0.00211 0.00827
GO:0016117 carotenoid biosynthetic process 4.23% (3/71) 3.53 0.002257 0.008736
GO:0016109 tetraterpenoid biosynthetic process 4.23% (3/71) 3.53 0.002257 0.008736
GO:0016116 carotenoid metabolic process 4.23% (3/71) 3.46 0.002589 0.009276
GO:0016108 tetraterpenoid metabolic process 4.23% (3/71) 3.46 0.002589 0.009276
GO:0000489 maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) 1.41% (1/71) 8.61 0.002567 0.009305
GO:0000470 maturation of LSU-rRNA 1.41% (1/71) 8.61 0.002567 0.009305
GO:0050515 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity 1.41% (1/71) 8.61 0.002567 0.009305
GO:0000488 maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) 1.41% (1/71) 8.61 0.002567 0.009305
GO:0046428 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity 1.41% (1/71) 8.61 0.002567 0.009305
GO:0008756 o-succinylbenzoate-CoA ligase activity 1.41% (1/71) 8.61 0.002567 0.009305
GO:0045435 lycopene epsilon cyclase activity 1.41% (1/71) 8.61 0.002567 0.009305
GO:1901465 positive regulation of tetrapyrrole biosynthetic process 1.41% (1/71) 8.61 0.002567 0.009305
GO:1901403 positive regulation of tetrapyrrole metabolic process 1.41% (1/71) 8.61 0.002567 0.009305
GO:0070455 positive regulation of heme biosynthetic process 1.41% (1/71) 8.61 0.002567 0.009305
GO:0070453 regulation of heme biosynthetic process 1.41% (1/71) 8.61 0.002567 0.009305
GO:0003006 developmental process involved in reproduction 16.9% (12/71) 1.33 0.002656 0.009461
GO:0016053 organic acid biosynthetic process 12.68% (9/71) 1.58 0.002954 0.010406
GO:0046394 carboxylic acid biosynthetic process 12.68% (9/71) 1.58 0.002954 0.010406
GO:1901564 organonitrogen compound metabolic process 28.17% (20/71) 0.9 0.003279 0.01142
GO:0140098 catalytic activity, acting on RNA 5.63% (4/71) 2.72 0.003261 0.011422
GO:0046148 pigment biosynthetic process 5.63% (4/71) 2.69 0.003462 0.011925
GO:0019901 protein kinase binding 2.82% (2/71) 4.52 0.003457 0.011976
GO:0005739 mitochondrion 23.94% (17/71) 1.01 0.003499 0.011987
GO:0034654 nucleobase-containing compound biosynthetic process 9.86% (7/71) 1.78 0.004209 0.014343
GO:0019866 organelle inner membrane 4.23% (3/71) 3.18 0.004498 0.015243
GO:0019900 kinase binding 2.82% (2/71) 4.32 0.004529 0.015266
GO:0042180 cellular ketone metabolic process 4.23% (3/71) 3.14 0.004897 0.016418
GO:0005080 protein kinase C binding 1.41% (1/71) 7.61 0.005128 0.016574
GO:0006426 glycyl-tRNA aminoacylation 1.41% (1/71) 7.61 0.005128 0.016574
GO:0004820 glycine-tRNA ligase activity 1.41% (1/71) 7.61 0.005128 0.016574
GO:0006427 histidyl-tRNA aminoacylation 1.41% (1/71) 7.61 0.005128 0.016574
GO:0004821 histidine-tRNA ligase activity 1.41% (1/71) 7.61 0.005128 0.016574
GO:0052624 2-phytyl-1,4-naphthoquinone methyltransferase activity 1.41% (1/71) 7.61 0.005128 0.016574
GO:0043495 protein membrane anchor 1.41% (1/71) 7.61 0.005128 0.016574
GO:0005694 chromosome 2.82% (2/71) 4.18 0.005482 0.017628
GO:0033014 tetrapyrrole biosynthetic process 4.23% (3/71) 3.07 0.005534 0.017705
GO:0009706 chloroplast inner membrane 2.82% (2/71) 4.15 0.005734 0.01825
GO:0034622 cellular protein-containing complex assembly 7.04% (5/71) 2.1 0.006309 0.019977
GO:0009528 plastid inner membrane 2.82% (2/71) 4.05 0.00652 0.020543
GO:0009295 nucleoid 2.82% (2/71) 4.02 0.006792 0.021294
GO:0010228 vegetative to reproductive phase transition of meristem 5.63% (4/71) 2.39 0.007292 0.022747
GO:0009041 uridylate kinase activity 1.41% (1/71) 7.02 0.007683 0.023048
GO:0004326 tetrahydrofolylpolyglutamate synthase activity 1.41% (1/71) 7.02 0.007683 0.023048
GO:0004150 dihydroneopterin aldolase activity 1.41% (1/71) 7.02 0.007683 0.023048
GO:0051194 positive regulation of cofactor metabolic process 1.41% (1/71) 7.02 0.007683 0.023048
GO:0002094 polyprenyltransferase activity 1.41% (1/71) 7.02 0.007683 0.023048
GO:0030267 glyoxylate reductase (NADP) activity 1.41% (1/71) 7.02 0.007683 0.023048
GO:0009501 amyloplast 1.41% (1/71) 7.02 0.007683 0.023048
GO:0042440 pigment metabolic process 5.63% (4/71) 2.36 0.007723 0.023057
GO:0065003 protein-containing complex assembly 7.04% (5/71) 2.04 0.007464 0.023168
GO:0009653 anatomical structure morphogenesis 11.27% (8/71) 1.47 0.008064 0.023963
GO:0043933 protein-containing complex subunit organization 7.04% (5/71) 2.0 0.008266 0.024446
GO:0009535 chloroplast thylakoid membrane 5.63% (4/71) 2.31 0.008823 0.025973
GO:0055035 plastid thylakoid membrane 5.63% (4/71) 2.3 0.009016 0.026416
GO:0034357 photosynthetic membrane 5.63% (4/71) 2.25 0.010127 0.029395
GO:0042651 thylakoid membrane 5.63% (4/71) 2.25 0.010127 0.029395
GO:1900865 chloroplast RNA modification 1.41% (1/71) 6.61 0.010231 0.02956
GO:0003723 RNA binding 7.04% (5/71) 1.92 0.010366 0.029813
GO:0022414 reproductive process 16.9% (12/71) 1.07 0.010869 0.031117
GO:0051188 cofactor biosynthetic process 7.04% (5/71) 1.89 0.011283 0.032156
GO:0009108 coenzyme biosynthetic process 5.63% (4/71) 2.2 0.011435 0.032443
GO:0005575 cellular_component 97.18% (69/71) 0.13 0.012182 0.034252
GO:0009767 photosynthetic electron transport chain 2.82% (2/71) 3.58 0.012179 0.034396
GO:0007020 microtubule nucleation 2.82% (2/71) 3.56 0.012538 0.035097
GO:0008169 C-methyltransferase activity 1.41% (1/71) 6.28 0.012772 0.035123
GO:0045995 regulation of embryonic development 1.41% (1/71) 6.28 0.012772 0.035123
GO:0030490 maturation of SSU-rRNA 1.41% (1/71) 6.28 0.012772 0.035123
GO:0003913 DNA photolyase activity 1.41% (1/71) 6.28 0.012772 0.035123
GO:0016208 AMP binding 1.41% (1/71) 6.02 0.015307 0.041368
GO:0010236 plastoquinone biosynthetic process 1.41% (1/71) 6.02 0.015307 0.041368
GO:0016123 xanthophyll biosynthetic process 1.41% (1/71) 6.02 0.015307 0.041368
GO:0033013 tetrapyrrole metabolic process 4.23% (3/71) 2.53 0.015254 0.041764
GO:0044436 thylakoid part 5.63% (4/71) 2.03 0.016712 0.04459
GO:0031969 chloroplast membrane 2.82% (2/71) 3.34 0.016797 0.044627
GO:0034645 cellular macromolecule biosynthetic process 11.27% (8/71) 1.28 0.016595 0.044657
GO:0006732 coenzyme metabolic process 7.04% (5/71) 1.75 0.016707 0.044766
GO:0031976 plastid thylakoid 4.23% (3/71) 2.46 0.017329 0.045653
GO:0009534 chloroplast thylakoid 4.23% (3/71) 2.46 0.017329 0.045653
GO:0016120 carotene biosynthetic process 1.41% (1/71) 5.8 0.017836 0.046595
GO:0009772 photosynthetic electron transport in photosystem II 1.41% (1/71) 5.8 0.017836 0.046595
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_17 0.024 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_149 0.022 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_17 0.02 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_119 0.024 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_153 0.023 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_191 0.023 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_196 0.02 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_197 0.02 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_211 0.027 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_248 0.033 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_257 0.023 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_261 0.025 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_264 0.024 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_57 0.022 Archaeplastida Compare
Gingko biloba HCCA Cluster_46 0.02 Archaeplastida Compare
Gingko biloba HCCA Cluster_64 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_65 0.023 Archaeplastida Compare
Gingko biloba HCCA Cluster_151 0.064 Archaeplastida Compare
Gingko biloba HCCA Cluster_202 0.06 Archaeplastida Compare
Gingko biloba HCCA Cluster_209 0.042 Archaeplastida Compare
Gingko biloba HCCA Cluster_245 0.031 Archaeplastida Compare
Gingko biloba HCCA Cluster_250 0.027 Archaeplastida Compare
Gingko biloba HCCA Cluster_302 0.03 Archaeplastida Compare
Gingko biloba HCCA Cluster_327 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_39 0.048 Archaeplastida Compare
Zea mays HCCA Cluster_70 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_133 0.026 Archaeplastida Compare
Zea mays HCCA Cluster_180 0.025 Archaeplastida Compare
Zea mays HCCA Cluster_185 0.026 Archaeplastida Compare
Zea mays HCCA Cluster_199 0.043 Archaeplastida Compare
Zea mays HCCA Cluster_232 0.024 Archaeplastida Compare
Zea mays HCCA Cluster_268 0.055 Archaeplastida Compare
Zea mays HCCA Cluster_318 0.078 Archaeplastida Compare
Zea mays HCCA Cluster_319 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_365 0.024 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_41 0.019 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_63 0.022 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_65 0.047 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_73 0.023 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_83 0.024 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_115 0.021 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_145 0.047 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_19 0.023 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_20 0.083 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_108 0.028 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_129 0.026 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_160 0.026 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_260 0.047 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_272 0.024 Archaeplastida Compare
Picea abies HCCA Cluster_53 0.066 Archaeplastida Compare
Picea abies HCCA Cluster_82 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_266 0.029 Archaeplastida Compare
Picea abies HCCA Cluster_283 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_341 0.049 Archaeplastida Compare
Picea abies HCCA Cluster_354 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_362 0.028 Archaeplastida Compare
Picea abies HCCA Cluster_472 0.025 Archaeplastida Compare
Picea abies HCCA Cluster_509 0.025 Archaeplastida Compare
Oryza sativa HCCA Cluster_54 0.028 Archaeplastida Compare
Oryza sativa HCCA Cluster_90 0.073 Archaeplastida Compare
Oryza sativa HCCA Cluster_139 0.027 Archaeplastida Compare
Oryza sativa HCCA Cluster_324 0.027 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_9 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_32 0.031 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_100 0.029 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_103 0.025 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_150 0.023 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_32 0.037 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_119 0.139 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_125 0.022 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_211 0.057 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_216 0.023 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_224 0.039 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_253 0.085 Archaeplastida Compare
Vitis vinifera HCCA Cluster_52 0.056 Archaeplastida Compare
Vitis vinifera HCCA Cluster_72 0.098 Archaeplastida Compare
Vitis vinifera HCCA Cluster_93 0.027 Archaeplastida Compare
Vitis vinifera HCCA Cluster_143 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_152 0.022 Archaeplastida Compare
Vitis vinifera HCCA Cluster_155 0.035 Archaeplastida Compare
Vitis vinifera HCCA Cluster_162 0.037 Archaeplastida Compare
Vitis vinifera HCCA Cluster_178 0.068 Archaeplastida Compare
Vitis vinifera HCCA Cluster_201 0.032 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_33 0.025 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_61 0.031 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_118 0.025 Archaeplastida Compare
Sequences (71) (download table)

InterPro Domains

GO Terms

Family Terms