Coexpression cluster: Cluster_28 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:1990904 ribonucleoprotein complex 39.35% (85/216) 5.67 0.0 0.0
GO:0043229 intracellular organelle 38.43% (83/216) 5.37 0.0 0.0
GO:0043232 intracellular non-membrane-bounded organelle 38.43% (83/216) 5.66 0.0 0.0
GO:0043603 cellular amide metabolic process 39.81% (86/216) 5.68 0.0 0.0
GO:0043604 amide biosynthetic process 39.81% (86/216) 5.7 0.0 0.0
GO:0044237 cellular metabolic process 40.28% (87/216) 3.83 0.0 0.0
GO:0044238 primary metabolic process 40.28% (87/216) 3.83 0.0 0.0
GO:0044249 cellular biosynthetic process 39.81% (86/216) 4.88 0.0 0.0
GO:0044260 cellular macromolecule metabolic process 39.81% (86/216) 4.35 0.0 0.0
GO:0044267 cellular protein metabolic process 39.81% (86/216) 4.74 0.0 0.0
GO:0044271 cellular nitrogen compound biosynthetic process 39.81% (86/216) 5.11 0.0 0.0
GO:0044424 intracellular part 39.35% (85/216) 4.58 0.0 0.0
GO:0044444 cytoplasmic part 39.35% (85/216) 5.26 0.0 0.0
GO:0044464 cell part 39.35% (85/216) 4.56 0.0 0.0
GO:0071704 organic substance metabolic process 40.28% (87/216) 3.78 0.0 0.0
GO:1901564 organonitrogen compound metabolic process 39.81% (86/216) 4.32 0.0 0.0
GO:1901566 organonitrogen compound biosynthetic process 39.81% (86/216) 5.38 0.0 0.0
GO:1901576 organic substance biosynthetic process 39.81% (86/216) 4.86 0.0 0.0
GO:0043228 non-membrane-bounded organelle 38.43% (83/216) 5.66 0.0 0.0
GO:0043226 organelle 38.43% (83/216) 5.36 0.0 0.0
GO:0043170 macromolecule metabolic process 40.28% (87/216) 4.14 0.0 0.0
GO:0006807 nitrogen compound metabolic process 40.28% (87/216) 3.99 0.0 0.0
GO:0006518 peptide metabolic process 39.81% (86/216) 5.69 0.0 0.0
GO:0006412 translation 39.81% (86/216) 5.72 0.0 0.0
GO:0005840 ribosome 38.43% (83/216) 5.73 0.0 0.0
GO:0005575 cellular_component 39.35% (85/216) 4.11 0.0 0.0
GO:0005198 structural molecule activity 39.81% (86/216) 5.65 0.0 0.0
GO:0003735 structural constituent of ribosome 39.81% (86/216) 5.7 0.0 0.0
GO:0034645 cellular macromolecule biosynthetic process 39.81% (86/216) 5.27 0.0 0.0
GO:0008150 biological_process 40.28% (87/216) 3.01 0.0 0.0
GO:0008152 metabolic process 40.28% (87/216) 3.4 0.0 0.0
GO:0043043 peptide biosynthetic process 39.81% (86/216) 5.72 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 40.28% (87/216) 4.73 0.0 0.0
GO:0032991 protein-containing complex 39.35% (85/216) 4.81 0.0 0.0
GO:0019538 protein metabolic process 39.81% (86/216) 4.58 0.0 0.0
GO:0009987 cellular process 40.28% (87/216) 3.64 0.0 0.0
GO:0009059 macromolecule biosynthetic process 39.81% (86/216) 5.24 0.0 0.0
GO:0009058 biosynthetic process 39.81% (86/216) 4.81 0.0 0.0
GO:0003674 molecular_function 41.67% (90/216) 2.54 0.0 0.0
GO:0003723 RNA binding 3.7% (8/216) 3.6 0.0 1e-06
GO:0019843 rRNA binding 1.85% (4/216) 5.65 1e-06 2e-06
GO:0015934 large ribosomal subunit 0.93% (2/216) 5.91 0.000435 0.000698
GO:0044391 ribosomal subunit 0.93% (2/216) 5.91 0.000435 0.000698
GO:0003676 nucleic acid binding 3.7% (8/216) 1.57 0.005912 0.009271
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_25 0.028 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_39 0.1 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_53 0.168 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_122 0.024 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_134 0.284 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_183 0.032 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_207 0.171 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_50 0.22 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_120 0.023 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_129 0.059 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_160 0.046 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_210 0.035 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_242 0.025 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_15 0.353 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_146 0.024 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_205 0.024 Archaeplastida Compare
Gingko biloba HCCA Cluster_129 0.222 Archaeplastida Compare
Gingko biloba HCCA Cluster_152 0.039 Archaeplastida Compare
Gingko biloba HCCA Cluster_227 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_248 0.026 Archaeplastida Compare
Gingko biloba HCCA Cluster_323 0.078 Archaeplastida Compare
Gingko biloba HCCA Cluster_335 0.055 Archaeplastida Compare
Zea mays HCCA Cluster_52 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_122 0.054 Archaeplastida Compare
Zea mays HCCA Cluster_137 0.481 Archaeplastida Compare
Zea mays HCCA Cluster_350 0.084 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_36 0.404 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_94 0.02 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_119 0.068 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_160 0.024 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_78 0.021 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_124 0.132 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_155 0.056 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_192 0.222 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_248 0.174 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_252 0.059 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_298 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_24 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_84 0.047 Archaeplastida Compare
Picea abies HCCA Cluster_90 0.055 Archaeplastida Compare
Picea abies HCCA Cluster_182 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_208 0.309 Archaeplastida Compare
Picea abies HCCA Cluster_261 0.036 Archaeplastida Compare
Picea abies HCCA Cluster_296 0.091 Archaeplastida Compare
Picea abies HCCA Cluster_339 0.026 Archaeplastida Compare
Picea abies HCCA Cluster_423 0.024 Archaeplastida Compare
Oryza sativa HCCA Cluster_41 0.024 Archaeplastida Compare
Oryza sativa HCCA Cluster_140 0.391 Archaeplastida Compare
Oryza sativa HCCA Cluster_175 0.028 Archaeplastida Compare
Oryza sativa HCCA Cluster_212 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_333 0.024 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_88 0.086 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_90 0.097 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_113 0.145 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_148 0.045 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_180 0.091 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_86 0.362 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_142 0.127 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_155 0.036 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_207 0.041 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_222 0.167 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_237 0.023 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_243 0.023 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_251 0.086 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_265 0.064 Archaeplastida Compare
Vitis vinifera HCCA Cluster_22 0.187 Archaeplastida Compare
Vitis vinifera HCCA Cluster_60 0.105 Archaeplastida Compare
Vitis vinifera HCCA Cluster_69 0.306 Archaeplastida Compare
Vitis vinifera HCCA Cluster_132 0.047 Archaeplastida Compare
Vitis vinifera HCCA Cluster_146 0.025 Archaeplastida Compare
Vitis vinifera HCCA Cluster_172 0.05 Archaeplastida Compare
Vitis vinifera HCCA Cluster_231 0.02 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_35 0.204 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_100 0.286 Archaeplastida Compare
Sequences (216) (download table)

InterPro Domains

GO Terms

Family Terms