Coexpression cluster: Cluster_248 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0043604 amide biosynthetic process 22.83% (29/127) 4.9 0.0 0.0
GO:0003735 structural constituent of ribosome 22.83% (29/127) 4.9 0.0 0.0
GO:0006518 peptide metabolic process 22.83% (29/127) 4.89 0.0 0.0
GO:0043603 cellular amide metabolic process 22.83% (29/127) 4.88 0.0 0.0
GO:0043043 peptide biosynthetic process 22.83% (29/127) 4.91 0.0 0.0
GO:0006412 translation 22.83% (29/127) 4.91 0.0 0.0
GO:0005198 structural molecule activity 22.83% (29/127) 4.84 0.0 0.0
GO:1901566 organonitrogen compound biosynthetic process 22.83% (29/127) 4.58 0.0 0.0
GO:0034645 cellular macromolecule biosynthetic process 22.83% (29/127) 4.47 0.0 0.0
GO:0009059 macromolecule biosynthetic process 22.83% (29/127) 4.44 0.0 0.0
GO:0005840 ribosome 20.47% (26/127) 4.82 0.0 0.0
GO:0043232 intracellular non-membrane-bounded organelle 20.47% (26/127) 4.75 0.0 0.0
GO:0043228 non-membrane-bounded organelle 20.47% (26/127) 4.75 0.0 0.0
GO:1990904 ribonucleoprotein complex 20.47% (26/127) 4.73 0.0 0.0
GO:0044271 cellular nitrogen compound biosynthetic process 22.83% (29/127) 4.3 0.0 0.0
GO:0044444 cytoplasmic part 21.26% (27/127) 4.37 0.0 0.0
GO:0043229 intracellular organelle 20.47% (26/127) 4.46 0.0 0.0
GO:0043226 organelle 20.47% (26/127) 4.45 0.0 0.0
GO:0044249 cellular biosynthetic process 22.83% (29/127) 4.07 0.0 0.0
GO:1901576 organic substance biosynthetic process 22.83% (29/127) 4.05 0.0 0.0
GO:0009058 biosynthetic process 22.83% (29/127) 4.01 0.0 0.0
GO:0044267 cellular protein metabolic process 22.83% (29/127) 3.94 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 22.83% (29/127) 3.91 0.0 0.0
GO:0019538 protein metabolic process 22.83% (29/127) 3.77 0.0 0.0
GO:0032991 protein-containing complex 21.26% (27/127) 3.92 0.0 0.0
GO:0044260 cellular macromolecule metabolic process 22.83% (29/127) 3.54 0.0 0.0
GO:1901564 organonitrogen compound metabolic process 22.83% (29/127) 3.51 0.0 0.0
GO:0044424 intracellular part 21.26% (27/127) 3.69 0.0 0.0
GO:0044464 cell part 21.26% (27/127) 3.67 0.0 0.0
GO:0043170 macromolecule metabolic process 22.83% (29/127) 3.33 0.0 0.0
GO:0006807 nitrogen compound metabolic process 22.83% (29/127) 3.17 0.0 0.0
GO:0044237 cellular metabolic process 23.62% (30/127) 3.06 0.0 0.0
GO:0005575 cellular_component 21.26% (27/127) 3.23 0.0 0.0
GO:0044238 primary metabolic process 22.83% (29/127) 3.01 0.0 0.0
GO:0071704 organic substance metabolic process 22.83% (29/127) 2.96 0.0 0.0
GO:0009987 cellular process 23.62% (30/127) 2.87 0.0 0.0
GO:0003674 molecular_function 32.28% (41/127) 2.17 0.0 0.0
GO:0008152 metabolic process 23.62% (30/127) 2.63 0.0 0.0
GO:0008150 biological_process 25.98% (33/127) 2.38 0.0 0.0
GO:0003723 RNA binding 9.45% (12/127) 4.95 0.0 0.0
GO:0003676 nucleic acid binding 11.81% (15/127) 3.25 0.0 0.0
GO:0005488 binding 15.75% (20/127) 1.97 0.0 0.0
GO:0097159 organic cyclic compound binding 12.6% (16/127) 2.22 0.0 1e-06
GO:1901363 heterocyclic compound binding 12.6% (16/127) 2.22 0.0 1e-06
GO:0019843 rRNA binding 2.36% (3/127) 6.0 1.3e-05 2.8e-05
GO:0008097 5S rRNA binding 1.57% (2/127) 8.0 1.5e-05 3.3e-05
GO:0042254 ribosome biogenesis 1.57% (2/127) 5.68 0.00067 0.001395
GO:0022613 ribonucleoprotein complex biogenesis 1.57% (2/127) 5.68 0.00067 0.001395
GO:0044085 cellular component biogenesis 1.57% (2/127) 5.09 0.001543 0.003148
GO:0005515 protein binding 3.94% (5/127) 2.02 0.008208 0.016416
GO:0034504 protein localization to nucleus 0.79% (1/127) 6.41 0.011693 0.021653
GO:0006606 protein import into nucleus 0.79% (1/127) 6.41 0.011693 0.021653
GO:0051170 import into nucleus 0.79% (1/127) 6.41 0.011693 0.021653
GO:0061608 nuclear import signal receptor activity 0.79% (1/127) 6.41 0.011693 0.021653
GO:0140142 nucleocytoplasmic carrier activity 0.79% (1/127) 6.0 0.01556 0.027298
GO:0140104 molecular carrier activity 0.79% (1/127) 6.0 0.01556 0.027298
GO:0031369 translation initiation factor binding 0.79% (1/127) 6.0 0.01556 0.027298
GO:0017038 protein import 0.79% (1/127) 5.68 0.019412 0.03347
GO:0006913 nucleocytoplasmic transport 0.79% (1/127) 5.41 0.02325 0.038115
GO:0005852 eukaryotic translation initiation factor 3 complex 0.79% (1/127) 5.41 0.02325 0.038115
GO:0051169 nuclear transport 0.79% (1/127) 5.41 0.02325 0.038115
GO:0005524 ATP binding 3.15% (4/127) 1.82 0.027444 0.044264
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_24 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_39 0.066 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_50 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_53 0.059 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_115 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_122 0.087 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_134 0.246 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_154 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_183 0.029 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_207 0.048 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_233 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_50 0.114 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_117 0.02 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_129 0.059 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_160 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_164 0.021 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_237 0.024 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_245 0.03 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_255 0.027 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_15 0.206 Archaeplastida Compare
Gingko biloba HCCA Cluster_13 0.021 Archaeplastida Compare
Gingko biloba HCCA Cluster_32 0.02 Archaeplastida Compare
Gingko biloba HCCA Cluster_108 0.023 Archaeplastida Compare
Gingko biloba HCCA Cluster_116 0.029 Archaeplastida Compare
Gingko biloba HCCA Cluster_129 0.144 Archaeplastida Compare
Gingko biloba HCCA Cluster_131 0.023 Archaeplastida Compare
Gingko biloba HCCA Cluster_212 0.036 Archaeplastida Compare
Gingko biloba HCCA Cluster_216 0.02 Archaeplastida Compare
Gingko biloba HCCA Cluster_234 0.021 Archaeplastida Compare
Gingko biloba HCCA Cluster_268 0.021 Archaeplastida Compare
Gingko biloba HCCA Cluster_323 0.048 Archaeplastida Compare
Gingko biloba HCCA Cluster_335 0.062 Archaeplastida Compare
Zea mays HCCA Cluster_7 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_29 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_56 0.025 Archaeplastida Compare
Zea mays HCCA Cluster_74 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_111 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_122 0.035 Archaeplastida Compare
Zea mays HCCA Cluster_137 0.252 Archaeplastida Compare
Zea mays HCCA Cluster_155 0.036 Archaeplastida Compare
Zea mays HCCA Cluster_204 0.025 Archaeplastida Compare
Zea mays HCCA Cluster_261 0.027 Archaeplastida Compare
Zea mays HCCA Cluster_350 0.063 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_13 0.034 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_36 0.267 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_94 0.023 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_108 0.036 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_28 0.174 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_78 0.036 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_105 0.021 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_124 0.059 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_155 0.024 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_182 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_192 0.098 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_201 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_84 0.072 Archaeplastida Compare
Picea abies HCCA Cluster_90 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_104 0.026 Archaeplastida Compare
Picea abies HCCA Cluster_181 0.026 Archaeplastida Compare
Picea abies HCCA Cluster_182 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_208 0.11 Archaeplastida Compare
Picea abies HCCA Cluster_261 0.024 Archaeplastida Compare
Picea abies HCCA Cluster_296 0.036 Archaeplastida Compare
Picea abies HCCA Cluster_339 0.034 Archaeplastida Compare
Picea abies HCCA Cluster_371 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_451 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_543 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_94 0.031 Archaeplastida Compare
Oryza sativa HCCA Cluster_140 0.214 Archaeplastida Compare
Oryza sativa HCCA Cluster_175 0.026 Archaeplastida Compare
Oryza sativa HCCA Cluster_206 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_209 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_343 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_3 0.023 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_29 0.023 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_88 0.083 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_90 0.036 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_95 0.033 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_113 0.06 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_144 0.025 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_148 0.043 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_166 0.022 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_180 0.054 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_47 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_53 0.022 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_79 0.028 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_86 0.208 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_105 0.027 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_142 0.056 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_198 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_202 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_206 0.03 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_207 0.064 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_222 0.126 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_251 0.058 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_262 0.037 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_265 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_284 0.043 Archaeplastida Compare
Vitis vinifera HCCA Cluster_22 0.137 Archaeplastida Compare
Vitis vinifera HCCA Cluster_60 0.069 Archaeplastida Compare
Vitis vinifera HCCA Cluster_69 0.115 Archaeplastida Compare
Vitis vinifera HCCA Cluster_100 0.025 Archaeplastida Compare
Vitis vinifera HCCA Cluster_121 0.032 Archaeplastida Compare
Vitis vinifera HCCA Cluster_132 0.039 Archaeplastida Compare
Vitis vinifera HCCA Cluster_138 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_172 0.056 Archaeplastida Compare
Vitis vinifera HCCA Cluster_193 0.025 Archaeplastida Compare
Vitis vinifera HCCA Cluster_242 0.019 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_35 0.189 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_56 0.021 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_100 0.088 Archaeplastida Compare
Sequences (127) (download table)

InterPro Domains

GO Terms

Family Terms