Coexpression cluster: Cluster_124 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0043603 cellular amide metabolic process 23.68% (18/76) 4.93 0.0 0.0
GO:1990904 ribonucleoprotein complex 23.68% (18/76) 4.94 0.0 0.0
GO:0043604 amide biosynthetic process 23.68% (18/76) 4.95 0.0 0.0
GO:0003735 structural constituent of ribosome 23.68% (18/76) 4.95 0.0 0.0
GO:0006518 peptide metabolic process 23.68% (18/76) 4.94 0.0 0.0
GO:0043228 non-membrane-bounded organelle 23.68% (18/76) 4.96 0.0 0.0
GO:0043232 intracellular non-membrane-bounded organelle 23.68% (18/76) 4.96 0.0 0.0
GO:0005198 structural molecule activity 23.68% (18/76) 4.9 0.0 0.0
GO:0043043 peptide biosynthetic process 23.68% (18/76) 4.97 0.0 0.0
GO:0006412 translation 23.68% (18/76) 4.97 0.0 0.0
GO:0005840 ribosome 23.68% (18/76) 5.03 0.0 0.0
GO:0043229 intracellular organelle 23.68% (18/76) 4.67 0.0 0.0
GO:0043226 organelle 23.68% (18/76) 4.67 0.0 0.0
GO:1901566 organonitrogen compound biosynthetic process 23.68% (18/76) 4.63 0.0 0.0
GO:0034645 cellular macromolecule biosynthetic process 23.68% (18/76) 4.52 0.0 0.0
GO:0044444 cytoplasmic part 23.68% (18/76) 4.52 0.0 0.0
GO:0009059 macromolecule biosynthetic process 23.68% (18/76) 4.49 0.0 0.0
GO:0044271 cellular nitrogen compound biosynthetic process 23.68% (18/76) 4.36 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 25.0% (19/76) 4.04 0.0 0.0
GO:0044249 cellular biosynthetic process 23.68% (18/76) 4.13 0.0 0.0
GO:1901576 organic substance biosynthetic process 23.68% (18/76) 4.11 0.0 0.0
GO:0032991 protein-containing complex 23.68% (18/76) 4.08 0.0 0.0
GO:0009058 biosynthetic process 23.68% (18/76) 4.06 0.0 0.0
GO:0044267 cellular protein metabolic process 23.68% (18/76) 4.0 0.0 0.0
GO:0044424 intracellular part 23.68% (18/76) 3.85 0.0 0.0
GO:0019538 protein metabolic process 23.68% (18/76) 3.83 0.0 0.0
GO:0044464 cell part 23.68% (18/76) 3.83 0.0 0.0
GO:0043170 macromolecule metabolic process 25.0% (19/76) 3.46 0.0 0.0
GO:0005575 cellular_component 25.0% (19/76) 3.46 0.0 0.0
GO:0044260 cellular macromolecule metabolic process 23.68% (18/76) 3.6 0.0 0.0
GO:1901564 organonitrogen compound metabolic process 23.68% (18/76) 3.57 0.0 0.0
GO:0006807 nitrogen compound metabolic process 25.0% (19/76) 3.3 0.0 0.0
GO:0044238 primary metabolic process 25.0% (19/76) 3.14 0.0 0.0
GO:0044237 cellular metabolic process 25.0% (19/76) 3.15 0.0 0.0
GO:0009987 cellular process 26.32% (20/76) 3.02 0.0 0.0
GO:0071704 organic substance metabolic process 25.0% (19/76) 3.09 0.0 0.0
GO:0008152 metabolic process 26.32% (20/76) 2.79 0.0 0.0
GO:0008150 biological_process 27.63% (21/76) 2.47 0.0 0.0
GO:0003674 molecular_function 28.95% (22/76) 2.01 0.0 0.0
GO:0001522 pseudouridine synthesis 1.32% (1/76) 6.42 0.011654 0.02389
GO:0009451 RNA modification 1.32% (1/76) 5.74 0.018581 0.037162
GO:0022613 ribonucleoprotein complex biogenesis 1.32% (1/76) 5.42 0.023173 0.04419
GO:0042254 ribosome biogenesis 1.32% (1/76) 5.42 0.023173 0.04419
GO:0019843 rRNA binding 1.32% (1/76) 5.15 0.027744 0.049456
GO:0051213 dioxygenase activity 1.32% (1/76) 5.15 0.027744 0.049456
GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen 1.32% (1/76) 5.15 0.027744 0.049456
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_39 0.038 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_53 0.107 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_98 0.032 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_134 0.167 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_137 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_183 0.044 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_207 0.065 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_50 0.104 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_129 0.026 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_210 0.041 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_211 0.02 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_261 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_265 0.019 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_15 0.158 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_131 0.022 Archaeplastida Compare
Gingko biloba HCCA Cluster_129 0.117 Archaeplastida Compare
Gingko biloba HCCA Cluster_234 0.028 Archaeplastida Compare
Gingko biloba HCCA Cluster_323 0.044 Archaeplastida Compare
Gingko biloba HCCA Cluster_335 0.026 Archaeplastida Compare
Zea mays HCCA Cluster_107 0.05 Archaeplastida Compare
Zea mays HCCA Cluster_122 0.037 Archaeplastida Compare
Zea mays HCCA Cluster_137 0.205 Archaeplastida Compare
Zea mays HCCA Cluster_243 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_275 0.026 Archaeplastida Compare
Zea mays HCCA Cluster_350 0.097 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_4 0.04 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_36 0.188 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_115 0.023 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_133 0.021 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_160 0.045 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_28 0.132 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_95 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_155 0.027 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_192 0.074 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_242 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_248 0.059 Archaeplastida Compare
Picea abies HCCA Cluster_84 0.026 Archaeplastida Compare
Picea abies HCCA Cluster_90 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_208 0.152 Archaeplastida Compare
Picea abies HCCA Cluster_239 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_261 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_296 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_90 0.027 Archaeplastida Compare
Oryza sativa HCCA Cluster_140 0.163 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_25 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_69 0.02 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_88 0.037 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_90 0.037 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_113 0.067 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_166 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_180 0.073 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_53 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_86 0.17 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_119 0.029 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_142 0.065 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_207 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_222 0.074 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_237 0.024 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_243 0.033 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_251 0.098 Archaeplastida Compare
Vitis vinifera HCCA Cluster_22 0.116 Archaeplastida Compare
Vitis vinifera HCCA Cluster_60 0.064 Archaeplastida Compare
Vitis vinifera HCCA Cluster_69 0.13 Archaeplastida Compare
Vitis vinifera HCCA Cluster_132 0.024 Archaeplastida Compare
Vitis vinifera HCCA Cluster_172 0.054 Archaeplastida Compare
Vitis vinifera HCCA Cluster_236 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_245 0.037 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_35 0.131 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_100 0.104 Archaeplastida Compare
Sequences (76) (download table)

InterPro Domains

GO Terms

Family Terms