Coexpression cluster: Cluster_90 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0044444 cytoplasmic part 16.22% (18/111) 4.3 0.0 0.0
GO:0032991 protein-containing complex 16.22% (18/111) 3.56 0.0 0.0
GO:0005840 ribosome 10.81% (12/111) 4.76 0.0 0.0
GO:0044271 cellular nitrogen compound biosynthetic process 13.51% (15/111) 3.92 0.0 0.0
GO:0043232 intracellular non-membrane-bounded organelle 10.81% (12/111) 4.65 0.0 0.0
GO:0043228 non-membrane-bounded organelle 10.81% (12/111) 4.65 0.0 0.0
GO:0034645 cellular macromolecule biosynthetic process 12.61% (14/111) 4.09 0.0 0.0
GO:1990904 ribonucleoprotein complex 10.81% (12/111) 4.55 0.0 0.0
GO:0044424 intracellular part 17.12% (19/111) 3.23 0.0 0.0
GO:0009059 macromolecule biosynthetic process 12.61% (14/111) 3.98 0.0 0.0
GO:0044464 cell part 17.12% (19/111) 3.11 0.0 0.0
GO:0006518 peptide metabolic process 9.91% (11/111) 4.49 0.0 0.0
GO:0005198 structural molecule activity 9.91% (11/111) 4.47 0.0 0.0
GO:0043603 cellular amide metabolic process 9.91% (11/111) 4.41 0.0 0.0
GO:0006412 translation 9.01% (10/111) 4.48 0.0 0.0
GO:0043043 peptide biosynthetic process 9.01% (10/111) 4.46 0.0 0.0
GO:0003735 structural constituent of ribosome 9.01% (10/111) 4.46 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 14.41% (16/111) 3.13 0.0 0.0
GO:0043604 amide biosynthetic process 9.01% (10/111) 4.38 0.0 0.0
GO:0043226 organelle 10.81% (12/111) 3.75 0.0 0.0
GO:0043229 intracellular organelle 10.81% (12/111) 3.75 0.0 0.0
GO:0044249 cellular biosynthetic process 13.51% (15/111) 3.15 0.0 0.0
GO:1901576 organic substance biosynthetic process 13.51% (15/111) 3.05 0.0 0.0
GO:0009058 biosynthetic process 13.51% (15/111) 2.91 0.0 0.0
GO:0005575 cellular_component 20.72% (23/111) 2.13 0.0 0.0
GO:1901566 organonitrogen compound biosynthetic process 9.01% (10/111) 3.4 0.0 0.0
GO:0044260 cellular macromolecule metabolic process 14.41% (16/111) 1.88 7e-06 5.8e-05
GO:0044422 organelle part 6.31% (7/111) 3.29 8e-06 6.6e-05
GO:0044446 intracellular organelle part 6.31% (7/111) 3.29 8e-06 6.6e-05
GO:0098796 membrane protein complex 4.5% (5/111) 4.01 1.6e-05 0.000123
GO:0006351 transcription, DNA-templated 3.6% (4/111) 4.71 1.8e-05 0.000129
GO:0097659 nucleic acid-templated transcription 3.6% (4/111) 4.71 1.8e-05 0.000129
GO:0008250 oligosaccharyltransferase complex 1.8% (2/111) 7.91 2.7e-05 0.000189
GO:0034654 nucleobase-containing compound biosynthetic process 4.5% (5/111) 3.63 5.7e-05 0.000379
GO:1902494 catalytic complex 3.6% (4/111) 4.25 6.2e-05 0.000405
GO:0044432 endoplasmic reticulum part 2.7% (3/111) 5.26 6.9e-05 0.000424
GO:0032774 RNA biosynthetic process 3.6% (4/111) 4.22 6.8e-05 0.000431
GO:0006807 nitrogen compound metabolic process 15.32% (17/111) 1.53 7.9e-05 0.000471
GO:0043170 macromolecule metabolic process 14.41% (16/111) 1.57 9.7e-05 0.000565
GO:1990234 transferase complex 2.7% (3/111) 4.96 0.00013 0.000737
GO:0044237 cellular metabolic process 15.32% (17/111) 1.45 0.000154 0.000851
GO:0044267 cellular protein metabolic process 10.81% (12/111) 1.8 0.000181 0.000955
GO:0018130 heterocycle biosynthetic process 4.5% (5/111) 3.28 0.000181 0.000977
GO:0019438 aromatic compound biosynthetic process 4.5% (5/111) 3.2 0.000228 0.001176
GO:1901362 organic cyclic compound biosynthetic process 4.5% (5/111) 2.95 0.000504 0.002545
GO:0019538 protein metabolic process 10.81% (12/111) 1.53 0.00094 0.00464
GO:0044238 primary metabolic process 15.32% (17/111) 1.16 0.001423 0.006874
GO:0072655 establishment of protein localization to mitochondrion 0.9% (1/111) 9.23 0.001666 0.006875
GO:0098799 outer mitochondrial membrane protein complex 0.9% (1/111) 9.23 0.001666 0.006875
GO:0071806 protein transmembrane transport 0.9% (1/111) 9.23 0.001666 0.006875
GO:0044743 protein transmembrane import into intracellular organelle 0.9% (1/111) 9.23 0.001666 0.006875
GO:0065002 intracellular protein transmembrane transport 0.9% (1/111) 9.23 0.001666 0.006875
GO:0070585 protein localization to mitochondrion 0.9% (1/111) 9.23 0.001666 0.006875
GO:0005742 mitochondrial outer membrane translocase complex 0.9% (1/111) 9.23 0.001666 0.006875
GO:0030150 protein import into mitochondrial matrix 0.9% (1/111) 9.23 0.001666 0.006875
GO:0044429 mitochondrial part 1.8% (2/111) 4.87 0.002161 0.008761
GO:0009987 cellular process 15.32% (17/111) 1.1 0.002304 0.009018
GO:0071704 organic substance metabolic process 15.32% (17/111) 1.1 0.002289 0.009116
GO:0016070 RNA metabolic process 3.6% (4/111) 2.71 0.00338 0.012375
GO:0006839 mitochondrial transport 0.9% (1/111) 8.23 0.003329 0.012388
GO:1990542 mitochondrial transmembrane transport 0.9% (1/111) 8.23 0.003329 0.012388
GO:0070469 respiratory chain 0.9% (1/111) 8.23 0.003329 0.012388
GO:0003899 DNA-directed 5'-3' RNA polymerase activity 1.8% (2/111) 4.42 0.003994 0.01439
GO:0055029 nuclear DNA-directed RNA polymerase complex 0.9% (1/111) 7.64 0.004989 0.016904
GO:0005666 RNA polymerase III complex 0.9% (1/111) 7.64 0.004989 0.016904
GO:0000428 DNA-directed RNA polymerase complex 0.9% (1/111) 7.64 0.004989 0.016904
GO:1901564 organonitrogen compound metabolic process 10.81% (12/111) 1.25 0.004797 0.017015
GO:0097747 RNA polymerase activity 1.8% (2/111) 4.1 0.006169 0.020294
GO:0034062 5'-3' RNA polymerase activity 1.8% (2/111) 4.1 0.006169 0.020294
GO:0006139 nucleobase-containing compound metabolic process 4.5% (5/111) 2.09 0.00672 0.021485
GO:0006383 transcription by RNA polymerase III 0.9% (1/111) 7.23 0.006647 0.021555
GO:0044425 membrane part 5.41% (6/111) 1.82 0.007284 0.022966
GO:0009143 nucleoside triphosphate catabolic process 0.9% (1/111) 6.91 0.008302 0.025815
GO:0030880 RNA polymerase complex 0.9% (1/111) 6.64 0.009954 0.030128
GO:0030126 COPI vesicle coat 0.9% (1/111) 6.64 0.009954 0.030128
GO:0046483 heterocycle metabolic process 4.5% (5/111) 1.91 0.010912 0.032592
GO:0090304 nucleic acid metabolic process 3.6% (4/111) 2.19 0.011846 0.034922
GO:0006725 cellular aromatic compound metabolic process 4.5% (5/111) 1.86 0.012515 0.036421
GO:0047429 nucleoside-triphosphate diphosphatase activity 0.9% (1/111) 6.23 0.01325 0.038073
GO:0003676 nucleic acid binding 7.21% (8/111) 1.34 0.014354 0.04073
GO:1901360 organic cyclic compound metabolic process 4.5% (5/111) 1.79 0.015276 0.04281
GO:0005743 mitochondrial inner membrane 0.9% (1/111) 5.91 0.016535 0.045223
GO:0019866 organelle inner membrane 0.9% (1/111) 5.91 0.016535 0.045223
GO:0006886 intracellular protein transport 1.8% (2/111) 3.32 0.01728 0.046698
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_25 0.023 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_39 0.036 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_53 0.061 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_123 0.023 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_137 0.033 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_197 0.027 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_207 0.021 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_2 0.02 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_50 0.044 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_160 0.023 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_242 0.02 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_250 0.031 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_15 0.031 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_48 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_20 0.022 Archaeplastida Compare
Gingko biloba HCCA Cluster_129 0.028 Archaeplastida Compare
Gingko biloba HCCA Cluster_152 0.026 Archaeplastida Compare
Zea mays HCCA Cluster_137 0.044 Archaeplastida Compare
Zea mays HCCA Cluster_166 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_304 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_309 0.025 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_13 0.022 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_36 0.031 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_77 0.022 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_119 0.037 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_159 0.021 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_23 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_28 0.055 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_78 0.025 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_99 0.028 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_121 0.025 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_124 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_125 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_155 0.026 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_192 0.042 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_248 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_252 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_298 0.027 Archaeplastida Compare
Picea abies HCCA Cluster_17 0.027 Archaeplastida Compare
Picea abies HCCA Cluster_30 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_39 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_199 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_208 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_261 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_304 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_601 0.027 Archaeplastida Compare
Oryza sativa HCCA Cluster_109 0.026 Archaeplastida Compare
Oryza sativa HCCA Cluster_140 0.028 Archaeplastida Compare
Oryza sativa HCCA Cluster_164 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_175 0.029 Archaeplastida Compare
Oryza sativa HCCA Cluster_193 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_273 0.024 Archaeplastida Compare
Oryza sativa HCCA Cluster_333 0.038 Archaeplastida Compare
Oryza sativa HCCA Cluster_352 0.031 Archaeplastida Compare
Oryza sativa HCCA Cluster_363 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_90 0.027 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_113 0.021 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_148 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_53 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_86 0.03 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_123 0.036 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_185 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_222 0.028 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_237 0.024 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_265 0.032 Archaeplastida Compare
Vitis vinifera HCCA Cluster_22 0.024 Archaeplastida Compare
Vitis vinifera HCCA Cluster_69 0.037 Archaeplastida Compare
Vitis vinifera HCCA Cluster_124 0.022 Archaeplastida Compare
Vitis vinifera HCCA Cluster_132 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_231 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_239 0.02 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_35 0.026 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_100 0.03 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_149 0.02 Archaeplastida Compare
Sequences (111) (download table)

InterPro Domains

GO Terms

Family Terms