Coexpression cluster: Cluster_408 (HCCA)

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0019001 guanyl nucleotide binding 5.48% (4/73) 3.77 0.000221 0.004833
GO:0032561 guanyl ribonucleotide binding 5.48% (4/73) 3.79 0.000211 0.005208
GO:0001882 nucleoside binding 5.48% (4/73) 3.79 0.000211 0.005208
GO:0001883 purine nucleoside binding 5.48% (4/73) 3.79 0.000211 0.005208
GO:0032550 purine ribonucleoside binding 5.48% (4/73) 3.79 0.000211 0.005208
GO:0032549 ribonucleoside binding 5.48% (4/73) 3.79 0.000211 0.005208
GO:0005525 GTP binding 5.48% (4/73) 3.79 0.000211 0.005208
GO:0044433 cytoplasmic vesicle part 2.74% (2/73) 6.03 0.000439 0.008654
GO:0036094 small molecule binding 15.07% (11/73) 1.68 0.000596 0.01067
GO:0043167 ion binding 19.18% (14/73) 1.35 0.000984 0.012116
GO:0097367 carbohydrate derivative binding 13.7% (10/73) 1.7 0.000936 0.012295
GO:0032553 ribonucleotide binding 13.7% (10/73) 1.72 0.000887 0.012477
GO:0017076 purine nucleotide binding 13.7% (10/73) 1.73 0.000826 0.01251
GO:0032555 purine ribonucleotide binding 13.7% (10/73) 1.73 0.00081 0.013292
GO:0005488 binding 28.77% (21/73) 0.99 0.001195 0.013849
GO:0035639 purine ribonucleoside triphosphate binding 13.7% (10/73) 2.04 0.000148 0.014613
GO:0000166 nucleotide binding 13.7% (10/73) 1.61 0.001554 0.015308
GO:1901265 nucleoside phosphate binding 13.7% (10/73) 1.61 0.001554 0.015308
GO:0016071 mRNA metabolic process 2.74% (2/73) 5.19 0.001402 0.01534
GO:0035658 Mon1-Ccz1 complex 1.37% (1/73) 8.83 0.00219 0.016593
GO:0043190 ATP-binding cassette (ABC) transporter complex 1.37% (1/73) 8.83 0.00219 0.016593
GO:1990351 transporter complex 1.37% (1/73) 8.83 0.00219 0.016593
GO:1902495 transmembrane transporter complex 1.37% (1/73) 8.83 0.00219 0.016593
GO:0004019 adenylosuccinate synthase activity 1.37% (1/73) 8.83 0.00219 0.016593
GO:0098533 ATPase dependent transmembrane transport complex 1.37% (1/73) 8.83 0.00219 0.016593
GO:0043168 anion binding 16.44% (12/73) 1.82 0.00013 0.025701
GO:0044440 endosomal part 1.37% (1/73) 7.51 0.005466 0.038457
GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay 1.37% (1/73) 7.51 0.005466 0.038457
GO:0006402 mRNA catabolic process 1.37% (1/73) 7.25 0.006556 0.040358
GO:0005681 spliceosomal complex 1.37% (1/73) 7.25 0.006556 0.040358
GO:0000956 nuclear-transcribed mRNA catabolic process 1.37% (1/73) 7.25 0.006556 0.040358
GO:1904949 ATPase complex 1.37% (1/73) 7.25 0.006556 0.040358
GO:0016070 RNA metabolic process 4.11% (3/73) 2.9 0.007696 0.040978
GO:1901363 heterocyclic compound binding 17.81% (13/73) 1.07 0.008182 0.041331
GO:0097159 organic cyclic compound binding 17.81% (13/73) 1.07 0.008182 0.041331
GO:0035091 phosphatidylinositol binding 1.37% (1/73) 7.03 0.007644 0.041831
GO:0006401 RNA catabolic process 1.37% (1/73) 7.03 0.007644 0.041831
GO:0006139 nucleobase-containing compound metabolic process 5.48% (4/73) 2.37 0.00764 0.044264
GO:0008144 drug binding 9.59% (7/73) 1.63 0.007585 0.045277
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_43 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_179 0.027 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_27 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_143 0.024 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_248 0.034 Archaeplastida Compare
Gingko biloba HCCA Cluster_4 0.023 Archaeplastida Compare
Gingko biloba HCCA Cluster_52 0.02 Archaeplastida Compare
Gingko biloba HCCA Cluster_73 0.029 Archaeplastida Compare
Gingko biloba HCCA Cluster_102 0.033 Archaeplastida Compare
Gingko biloba HCCA Cluster_324 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_6 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_79 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_199 0.029 Archaeplastida Compare
Zea mays HCCA Cluster_240 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_267 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_353 0.02 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_156 0.034 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_11 0.021 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_20 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_272 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_265 0.026 Archaeplastida Compare
Picea abies HCCA Cluster_321 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_354 0.024 Archaeplastida Compare
Picea abies HCCA Cluster_499 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_503 0.031 Archaeplastida Compare
Oryza sativa HCCA Cluster_54 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_112 0.024 Archaeplastida Compare
Oryza sativa HCCA Cluster_114 0.026 Archaeplastida Compare
Oryza sativa HCCA Cluster_204 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_314 0.041 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_84 0.027 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_102 0.029 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_125 0.023 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_146 0.027 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_202 0.028 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_207 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_259 0.024 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_260 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_54 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_92 0.022 Archaeplastida Compare
Vitis vinifera HCCA Cluster_121 0.022 Archaeplastida Compare
Vitis vinifera HCCA Cluster_164 0.028 Archaeplastida Compare
Vitis vinifera HCCA Cluster_223 0.032 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_30 0.022 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_56 0.03 Archaeplastida Compare
Sequences (73) (download table)

InterPro Domains

GO Terms

Family Terms