Coexpression cluster: Cluster_399 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0008270 zinc ion binding 23.2% (29/125) 4.44 0.0 0.0
GO:0043169 cation binding 26.4% (33/125) 3.15 0.0 0.0
GO:0046872 metal ion binding 26.4% (33/125) 3.16 0.0 0.0
GO:0046914 transition metal ion binding 23.2% (29/125) 3.43 0.0 0.0
GO:0043167 ion binding 30.4% (38/125) 2.01 0.0 0.0
GO:0005488 binding 34.4% (43/125) 1.25 0.0 1e-06
GO:0003674 molecular_function 46.4% (58/125) 0.93 0.0 3e-06
GO:0004743 pyruvate kinase activity 2.4% (3/125) 6.32 7e-06 0.000224
GO:0030955 potassium ion binding 2.4% (3/125) 6.32 7e-06 0.000224
GO:0031420 alkali metal ion binding 2.4% (3/125) 6.32 7e-06 0.000224
GO:0055086 nucleobase-containing small molecule metabolic process 4.0% (5/125) 3.99 1.8e-05 0.0005
GO:0006164 purine nucleotide biosynthetic process 3.2% (4/125) 4.6 2.4e-05 0.000633
GO:0072522 purine-containing compound biosynthetic process 3.2% (4/125) 4.55 2.8e-05 0.000667
GO:0009165 nucleotide biosynthetic process 3.2% (4/125) 4.36 4.7e-05 0.000976
GO:1901293 nucleoside phosphate biosynthetic process 3.2% (4/125) 4.36 4.7e-05 0.000976
GO:0009179 purine ribonucleoside diphosphate metabolic process 2.4% (3/125) 5.0 0.000118 0.001274
GO:0042866 pyruvate biosynthetic process 2.4% (3/125) 5.0 0.000118 0.001274
GO:0006096 glycolytic process 2.4% (3/125) 5.0 0.000118 0.001274
GO:0046031 ADP metabolic process 2.4% (3/125) 5.0 0.000118 0.001274
GO:0009185 ribonucleoside diphosphate metabolic process 2.4% (3/125) 5.0 0.000118 0.001274
GO:0006165 nucleoside diphosphate phosphorylation 2.4% (3/125) 5.0 0.000118 0.001274
GO:0009132 nucleoside diphosphate metabolic process 2.4% (3/125) 5.0 0.000118 0.001274
GO:0006757 ATP generation from ADP 2.4% (3/125) 5.0 0.000118 0.001274
GO:0046939 nucleotide phosphorylation 2.4% (3/125) 5.0 0.000118 0.001274
GO:0009135 purine nucleoside diphosphate metabolic process 2.4% (3/125) 5.0 0.000118 0.001274
GO:0009166 nucleotide catabolic process 2.4% (3/125) 5.0 0.000118 0.001274
GO:0006090 pyruvate metabolic process 2.4% (3/125) 4.92 0.000141 0.001419
GO:0044271 cellular nitrogen compound biosynthetic process 5.6% (7/125) 2.65 0.000138 0.001432
GO:1901292 nucleoside phosphate catabolic process 2.4% (3/125) 4.86 0.000157 0.001489
GO:0034404 nucleobase-containing small molecule biosynthetic process 2.4% (3/125) 4.79 0.000184 0.001514
GO:0072525 pyridine-containing compound biosynthetic process 2.4% (3/125) 4.79 0.000184 0.001514
GO:0009117 nucleotide metabolic process 3.2% (4/125) 3.91 0.000157 0.001529
GO:0006163 purine nucleotide metabolic process 3.2% (4/125) 4.16 7.9e-05 0.001547
GO:0090407 organophosphate biosynthetic process 3.2% (4/125) 3.83 0.000194 0.001548
GO:0006753 nucleoside phosphate metabolic process 3.2% (4/125) 3.86 0.000179 0.001552
GO:0019359 nicotinamide nucleotide biosynthetic process 2.4% (3/125) 4.81 0.000175 0.001561
GO:0019363 pyridine nucleotide biosynthetic process 2.4% (3/125) 4.81 0.000175 0.001561
GO:0072521 purine-containing compound metabolic process 3.2% (4/125) 4.13 8.7e-05 0.001603
GO:0006733 oxidoreduction coenzyme metabolic process 2.4% (3/125) 4.67 0.000236 0.00171
GO:0072524 pyridine-containing compound metabolic process 2.4% (3/125) 4.67 0.000236 0.00171
GO:0019362 pyridine nucleotide metabolic process 2.4% (3/125) 4.69 0.000225 0.001711
GO:0046496 nicotinamide nucleotide metabolic process 2.4% (3/125) 4.69 0.000225 0.001711
GO:1901566 organonitrogen compound biosynthetic process 5.6% (7/125) 2.72 0.000105 0.001811
GO:0006754 ATP biosynthetic process 2.4% (3/125) 4.51 0.000322 0.002049
GO:0009206 purine ribonucleoside triphosphate biosynthetic process 2.4% (3/125) 4.51 0.000322 0.002049
GO:0009142 nucleoside triphosphate biosynthetic process 2.4% (3/125) 4.51 0.000322 0.002049
GO:0009145 purine nucleoside triphosphate biosynthetic process 2.4% (3/125) 4.51 0.000322 0.002049
GO:0009201 ribonucleoside triphosphate biosynthetic process 2.4% (3/125) 4.51 0.000322 0.002049
GO:0009167 purine ribonucleoside monophosphate metabolic process 2.4% (3/125) 4.38 0.000426 0.002077
GO:0009123 nucleoside monophosphate metabolic process 2.4% (3/125) 4.38 0.000426 0.002077
GO:0009161 ribonucleoside monophosphate metabolic process 2.4% (3/125) 4.38 0.000426 0.002077
GO:0009126 purine nucleoside monophosphate metabolic process 2.4% (3/125) 4.38 0.000426 0.002077
GO:0009168 purine ribonucleoside monophosphate biosynthetic process 2.4% (3/125) 4.43 0.000379 0.002112
GO:0009156 ribonucleoside monophosphate biosynthetic process 2.4% (3/125) 4.43 0.000379 0.002112
GO:0009124 nucleoside monophosphate biosynthetic process 2.4% (3/125) 4.43 0.000379 0.002112
GO:0009127 purine nucleoside monophosphate biosynthetic process 2.4% (3/125) 4.43 0.000379 0.002112
GO:0009199 ribonucleoside triphosphate metabolic process 2.4% (3/125) 4.4 0.00041 0.002132
GO:0009144 purine nucleoside triphosphate metabolic process 2.4% (3/125) 4.4 0.00041 0.002132
GO:0009205 purine ribonucleoside triphosphate metabolic process 2.4% (3/125) 4.4 0.00041 0.002132
GO:0009058 biosynthetic process 7.2% (9/125) 2.01 0.000446 0.002139
GO:0034655 nucleobase-containing compound catabolic process 2.4% (3/125) 4.47 0.00035 0.002139
GO:0046434 organophosphate catabolic process 2.4% (3/125) 4.47 0.00035 0.002139
GO:0006091 generation of precursor metabolites and energy 2.4% (3/125) 4.41 0.000394 0.002158
GO:0016052 carbohydrate catabolic process 2.4% (3/125) 4.34 0.000459 0.002171
GO:0046034 ATP metabolic process 2.4% (3/125) 4.45 0.000364 0.002185
GO:0046390 ribose phosphate biosynthetic process 2.4% (3/125) 4.29 0.000512 0.00222
GO:0009260 ribonucleotide biosynthetic process 2.4% (3/125) 4.29 0.000512 0.00222
GO:0009152 purine ribonucleotide biosynthetic process 2.4% (3/125) 4.29 0.000512 0.00222
GO:0018130 heterocycle biosynthetic process 4.0% (5/125) 3.1 0.000314 0.002225
GO:0046700 heterocycle catabolic process 2.4% (3/125) 4.3 0.000494 0.002234
GO:0044270 cellular nitrogen compound catabolic process 2.4% (3/125) 4.3 0.000494 0.002234
GO:0009141 nucleoside triphosphate metabolic process 2.4% (3/125) 4.3 0.000494 0.002234
GO:0019439 aromatic compound catabolic process 2.4% (3/125) 4.25 0.00055 0.002317
GO:1901361 organic cyclic compound catabolic process 2.4% (3/125) 4.25 0.00055 0.002317
GO:0004190 aspartic-type endopeptidase activity 1.6% (2/125) 5.74 0.000649 0.002664
GO:0070001 aspartic-type peptidase activity 1.6% (2/125) 5.74 0.000649 0.002664
GO:0044249 cellular biosynthetic process 6.4% (8/125) 2.07 0.000684 0.002771
GO:0009108 coenzyme biosynthetic process 2.4% (3/125) 4.09 0.000763 0.003051
GO:0019637 organophosphate metabolic process 3.2% (4/125) 3.3 0.000779 0.003078
GO:1901362 organic cyclic compound biosynthetic process 4.0% (5/125) 2.78 0.000864 0.003369
GO:1901135 carbohydrate derivative metabolic process 3.2% (4/125) 3.25 0.000877 0.003377
GO:1901576 organic substance biosynthetic process 6.4% (8/125) 1.98 0.001055 0.004016
GO:1901137 carbohydrate derivative biosynthetic process 2.4% (3/125) 3.89 0.00114 0.004284
GO:0034654 nucleobase-containing compound biosynthetic process 3.2% (4/125) 3.14 0.001166 0.004331
GO:0051188 cofactor biosynthetic process 2.4% (3/125) 3.84 0.001265 0.004645
GO:0009259 ribonucleotide metabolic process 2.4% (3/125) 3.82 0.001298 0.004655
GO:0009150 purine ribonucleotide metabolic process 2.4% (3/125) 3.82 0.001298 0.004655
GO:0000287 magnesium ion binding 2.4% (3/125) 3.81 0.001331 0.00472
GO:0072330 monocarboxylic acid biosynthetic process 2.4% (3/125) 3.8 0.001365 0.004786
GO:0019693 ribose phosphate metabolic process 2.4% (3/125) 3.74 0.001542 0.005347
GO:0006732 coenzyme metabolic process 2.4% (3/125) 3.72 0.001579 0.005415
GO:0019748 secondary metabolic process 0.8% (1/125) 9.06 0.001876 0.006097
GO:0044550 secondary metabolite biosynthetic process 0.8% (1/125) 9.06 0.001876 0.006097
GO:0046937 phytochelatin metabolic process 0.8% (1/125) 9.06 0.001876 0.006097
GO:0046938 phytochelatin biosynthetic process 0.8% (1/125) 9.06 0.001876 0.006097
GO:0016756 glutathione gamma-glutamylcysteinyltransferase activity 0.8% (1/125) 9.06 0.001876 0.006097
GO:0032787 monocarboxylic acid metabolic process 2.4% (3/125) 3.56 0.002203 0.007087
GO:0051540 metal cluster binding 1.6% (2/125) 4.6 0.003137 0.009885
GO:0051536 iron-sulfur cluster binding 1.6% (2/125) 4.6 0.003137 0.009885
GO:0019438 aromatic compound biosynthetic process 3.2% (4/125) 2.71 0.003427 0.010691
GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process 0.8% (1/125) 8.06 0.003748 0.010829
GO:0019856 pyrimidine nucleobase biosynthetic process 0.8% (1/125) 8.06 0.003748 0.010829
GO:0010038 response to metal ion 0.8% (1/125) 8.06 0.003748 0.010829
GO:0018196 peptidyl-asparagine modification 0.8% (1/125) 8.06 0.003748 0.010829
GO:0006206 pyrimidine nucleobase metabolic process 0.8% (1/125) 8.06 0.003748 0.010829
GO:0004590 orotidine-5'-phosphate decarboxylase activity 0.8% (1/125) 8.06 0.003748 0.010829
GO:0018279 protein N-linked glycosylation via asparagine 0.8% (1/125) 8.06 0.003748 0.010829
GO:0051186 cofactor metabolic process 2.4% (3/125) 3.3 0.003608 0.011145
GO:0034641 cellular nitrogen compound metabolic process 5.6% (7/125) 1.76 0.004818 0.013792
GO:0006486 protein glycosylation 1.6% (2/125) 4.25 0.005032 0.014143
GO:0043413 macromolecule glycosylation 1.6% (2/125) 4.25 0.005032 0.014143
GO:0070085 glycosylation 1.6% (2/125) 4.23 0.005208 0.014509
GO:0046112 nucleobase biosynthetic process 0.8% (1/125) 7.47 0.005617 0.015374
GO:0009112 nucleobase metabolic process 0.8% (1/125) 7.47 0.005617 0.015374
GO:0044281 small molecule metabolic process 4.0% (5/125) 2.14 0.005874 0.015935
GO:0017144 drug metabolic process 2.4% (3/125) 2.98 0.00665 0.017887
GO:0004175 endopeptidase activity 2.4% (3/125) 2.97 0.006832 0.018219
GO:0004643 phosphoribosylaminoimidazolecarboxamide formyltransferase activity 0.8% (1/125) 7.06 0.007483 0.019619
GO:0003937 IMP cyclohydrolase activity 0.8% (1/125) 7.06 0.007483 0.019619
GO:0044248 cellular catabolic process 2.4% (3/125) 2.85 0.008604 0.02237
GO:0046394 carboxylic acid biosynthetic process 2.4% (3/125) 2.81 0.009249 0.023652
GO:0016053 organic acid biosynthetic process 2.4% (3/125) 2.81 0.009249 0.023652
GO:0019238 cyclohydrolase activity 0.8% (1/125) 6.74 0.009345 0.023704
GO:0006139 nucleobase-containing compound metabolic process 4.0% (5/125) 1.92 0.010911 0.027453
GO:0016755 transferase activity, transferring amino-acyl groups 0.8% (1/125) 6.47 0.011204 0.027964
GO:0007264 small GTPase mediated signal transduction 0.8% (1/125) 6.25 0.013059 0.032336
GO:1901575 organic substance catabolic process 2.4% (3/125) 2.61 0.013429 0.032991
GO:0009056 catabolic process 2.4% (3/125) 2.56 0.014688 0.035802
GO:0044283 small molecule biosynthetic process 2.4% (3/125) 2.55 0.014977 0.036222
GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines 0.8% (1/125) 5.89 0.016759 0.039914
GO:0017056 structural constituent of nuclear pore 0.8% (1/125) 5.89 0.016759 0.039914
GO:0046483 heterocycle metabolic process 4.0% (5/125) 1.74 0.017458 0.041264
GO:0006725 cellular aromatic compound metabolic process 4.0% (5/125) 1.69 0.019931 0.046754
GO:0016742 hydroxymethyl-, formyl- and related transferase activity 0.8% (1/125) 5.6 0.020445 0.047603
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_17 0.025 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_139 0.03 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_194 0.026 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_252 0.031 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_144 0.029 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_235 0.035 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_247 0.021 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_249 0.022 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_260 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_104 0.032 Archaeplastida Compare
Gingko biloba HCCA Cluster_125 0.036 Archaeplastida Compare
Gingko biloba HCCA Cluster_175 0.02 Archaeplastida Compare
Gingko biloba HCCA Cluster_205 0.02 Archaeplastida Compare
Gingko biloba HCCA Cluster_229 0.024 Archaeplastida Compare
Gingko biloba HCCA Cluster_231 0.032 Archaeplastida Compare
Gingko biloba HCCA Cluster_257 0.029 Archaeplastida Compare
Zea mays HCCA Cluster_6 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_158 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_216 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_229 0.021 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_111 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_186 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_244 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_19 0.029 Archaeplastida Compare
Picea abies HCCA Cluster_197 0.034 Archaeplastida Compare
Picea abies HCCA Cluster_198 0.027 Archaeplastida Compare
Picea abies HCCA Cluster_251 0.024 Archaeplastida Compare
Picea abies HCCA Cluster_308 0.03 Archaeplastida Compare
Picea abies HCCA Cluster_403 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_454 0.027 Archaeplastida Compare
Picea abies HCCA Cluster_472 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_516 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_94 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_312 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_316 0.021 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_116 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_164 0.02 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_204 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_260 0.025 Archaeplastida Compare
Vitis vinifera HCCA Cluster_197 0.033 Archaeplastida Compare
Vitis vinifera HCCA Cluster_221 0.02 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_56 0.019 Archaeplastida Compare
Sequences (125) (download table)

InterPro Domains

GO Terms

Family Terms