Coexpression cluster: Cluster_74 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006259 DNA metabolic process 5.21% (11/211) 3.28 0.0 4e-06
GO:0005694 chromosome 2.84% (6/211) 5.14 0.0 5e-06
GO:0140097 catalytic activity, acting on DNA 3.79% (8/211) 3.83 0.0 9e-06
GO:0090304 nucleic acid metabolic process 8.06% (17/211) 2.31 0.0 9e-06
GO:0006139 nucleobase-containing compound metabolic process 9.0% (19/211) 2.07 0.0 1.2e-05
GO:0003676 nucleic acid binding 13.27% (28/211) 1.57 0.0 1.4e-05
GO:0006725 cellular aromatic compound metabolic process 9.48% (20/211) 1.96 0.0 1.5e-05
GO:1901360 organic cyclic compound metabolic process 9.48% (20/211) 1.92 0.0 1.6e-05
GO:0017111 nucleoside-triphosphatase activity 7.11% (15/211) 2.32 0.0 1.8e-05
GO:0016462 pyrophosphatase activity 7.11% (15/211) 2.29 1e-06 1.9e-05
GO:0016817 hydrolase activity, acting on acid anhydrides 7.11% (15/211) 2.25 1e-06 2.1e-05
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 7.11% (15/211) 2.25 1e-06 2.1e-05
GO:0046483 heterocycle metabolic process 9.0% (19/211) 1.89 1e-06 2.9e-05
GO:0097159 organic cyclic compound binding 22.75% (48/211) 1.01 1e-06 3.4e-05
GO:0004386 helicase activity 4.27% (9/211) 3.05 2e-06 3.5e-05
GO:1901363 heterocyclic compound binding 22.75% (48/211) 1.01 1e-06 3.6e-05
GO:0032555 purine ribonucleotide binding 13.74% (29/211) 1.37 3e-06 6e-05
GO:0032553 ribonucleotide binding 13.74% (29/211) 1.35 3e-06 6e-05
GO:0042623 ATPase activity, coupled 4.27% (9/211) 2.92 3e-06 6.2e-05
GO:0017076 purine nucleotide binding 13.74% (29/211) 1.36 3e-06 6.3e-05
GO:0097367 carbohydrate derivative binding 13.74% (29/211) 1.34 4e-06 6.7e-05
GO:0019239 deaminase activity 1.42% (3/211) 6.02 9e-06 0.000113
GO:0030554 adenyl nucleotide binding 12.32% (26/211) 1.37 9e-06 0.000116
GO:0051276 chromosome organization 1.9% (4/211) 4.93 8e-06 0.000117
GO:0008094 DNA-dependent ATPase activity 1.9% (4/211) 4.93 8e-06 0.000117
GO:1901265 nucleoside phosphate binding 14.22% (30/211) 1.26 9e-06 0.000118
GO:0000166 nucleotide binding 14.22% (30/211) 1.26 9e-06 0.000118
GO:0032559 adenyl ribonucleotide binding 12.32% (26/211) 1.38 8e-06 0.000124
GO:0035639 purine ribonucleoside triphosphate binding 12.32% (26/211) 1.34 1.3e-05 0.000157
GO:0036094 small molecule binding 14.22% (30/211) 1.19 2.2e-05 0.000256
GO:0043168 anion binding 13.74% (29/211) 1.17 3.6e-05 0.000406
GO:0005524 ATP binding 10.9% (23/211) 1.35 3.8e-05 0.000414
GO:0005488 binding 31.28% (66/211) 0.67 4.1e-05 0.000438
GO:0004000 adenosine deaminase activity 0.95% (2/211) 7.02 5.9e-05 0.000599
GO:0003917 DNA topoisomerase type I activity 0.95% (2/211) 7.02 5.9e-05 0.000599
GO:0006265 DNA topological change 1.42% (3/211) 5.14 7.2e-05 0.000602
GO:0003916 DNA topoisomerase activity 1.42% (3/211) 5.14 7.2e-05 0.000602
GO:0071103 DNA conformation change 1.42% (3/211) 5.14 7.2e-05 0.000602
GO:0070035 purine NTP-dependent helicase activity 2.84% (6/211) 3.14 6.3e-05 0.000604
GO:0008026 ATP-dependent helicase activity 2.84% (6/211) 3.14 6.3e-05 0.000604
GO:0016887 ATPase activity 4.27% (9/211) 2.38 6.6e-05 0.00061
GO:0034641 cellular nitrogen compound metabolic process 9.0% (19/211) 1.46 7e-05 0.000636
GO:0008144 drug binding 10.9% (23/211) 1.28 8.3e-05 0.000683
GO:0003723 RNA binding 4.27% (9/211) 2.13 0.000246 0.001978
GO:0016787 hydrolase activity 12.32% (26/211) 1.08 0.000253 0.001988
GO:0006281 DNA repair 2.37% (5/211) 3.13 0.000274 0.002104
GO:0006974 cellular response to DNA damage stimulus 2.37% (5/211) 3.09 0.000311 0.002193
GO:0033554 cellular response to stress 2.37% (5/211) 3.09 0.000311 0.002193
GO:0051716 cellular response to stimulus 2.37% (5/211) 3.09 0.000311 0.002193
GO:0003677 DNA binding 6.64% (14/211) 1.57 0.000308 0.002314
GO:0006996 organelle organization 1.9% (4/211) 3.46 0.000476 0.003295
GO:0006396 RNA processing 2.84% (6/211) 2.59 0.000512 0.003474
GO:0003725 double-stranded RNA binding 1.42% (3/211) 4.02 0.000816 0.005435
GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity 0.95% (2/211) 5.43 0.000873 0.005603
GO:0061505 DNA topoisomerase II activity 0.95% (2/211) 5.43 0.000873 0.005603
GO:0034061 DNA polymerase activity 1.42% (3/211) 3.85 0.001159 0.007309
GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines 0.95% (2/211) 5.21 0.001216 0.00753
GO:0043167 ion binding 16.11% (34/211) 0.65 0.005501 0.033482
GO:0003678 DNA helicase activity 0.95% (2/211) 4.11 0.005837 0.034924
GO:0038032 termination of G-protein coupled receptor signaling pathway 0.47% (1/211) 7.02 0.007725 0.038409
GO:0023057 negative regulation of signaling 0.47% (1/211) 7.02 0.007725 0.038409
GO:0009968 negative regulation of signal transduction 0.47% (1/211) 7.02 0.007725 0.038409
GO:0010648 negative regulation of cell communication 0.47% (1/211) 7.02 0.007725 0.038409
GO:0009360 DNA polymerase III complex 0.47% (1/211) 7.02 0.007725 0.038409
GO:0008277 regulation of G-protein coupled receptor protein signaling pathway 0.47% (1/211) 7.02 0.007725 0.038409
GO:0023021 termination of signal transduction 0.47% (1/211) 7.02 0.007725 0.038409
GO:0045744 negative regulation of G-protein coupled receptor protein signaling pathway 0.47% (1/211) 7.02 0.007725 0.038409
GO:0048585 negative regulation of response to stimulus 0.47% (1/211) 7.02 0.007725 0.038409
GO:0042575 DNA polymerase complex 0.47% (1/211) 7.02 0.007725 0.038409
GO:0030173 integral component of Golgi membrane 0.47% (1/211) 7.02 0.007725 0.038409
GO:0031228 intrinsic component of Golgi membrane 0.47% (1/211) 7.02 0.007725 0.038409
GO:0003887 DNA-directed DNA polymerase activity 0.95% (2/211) 3.77 0.009315 0.045671
GO:0016070 RNA metabolic process 3.32% (7/211) 1.58 0.009486 0.045871
GO:0043228 non-membrane-bounded organelle 2.84% (6/211) 1.72 0.0101 0.047538
GO:0043232 intracellular non-membrane-bounded organelle 2.84% (6/211) 1.72 0.0101 0.047538
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_11 0.035 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_24 0.021 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_31 0.026 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_39 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_40 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_114 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_127 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_139 0.031 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_147 0.024 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_149 0.023 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_152 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_192 0.052 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_220 0.037 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_221 0.024 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_232 0.026 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_240 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_247 0.021 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_252 0.028 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_40 0.023 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_55 0.023 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_91 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_108 0.021 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_128 0.035 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_140 0.034 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_144 0.027 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_147 0.024 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_172 0.028 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_190 0.022 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_204 0.028 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_231 0.035 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_258 0.022 Archaeplastida Compare
Gingko biloba HCCA Cluster_4 0.02 Archaeplastida Compare
Gingko biloba HCCA Cluster_97 0.023 Archaeplastida Compare
Gingko biloba HCCA Cluster_131 0.036 Archaeplastida Compare
Gingko biloba HCCA Cluster_182 0.029 Archaeplastida Compare
Gingko biloba HCCA Cluster_262 0.023 Archaeplastida Compare
Gingko biloba HCCA Cluster_273 0.02 Archaeplastida Compare
Gingko biloba HCCA Cluster_289 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_324 0.028 Archaeplastida Compare
Zea mays HCCA Cluster_30 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_56 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_175 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_216 0.051 Archaeplastida Compare
Zea mays HCCA Cluster_225 0.034 Archaeplastida Compare
Zea mays HCCA Cluster_229 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_250 0.026 Archaeplastida Compare
Zea mays HCCA Cluster_267 0.034 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_22 0.028 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_24 0.029 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_110 0.03 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_128 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_23 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_55 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_147 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_158 0.024 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_237 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_272 0.024 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_274 0.025 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_290 0.037 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_300 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_32 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_76 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_93 0.03 Archaeplastida Compare
Picea abies HCCA Cluster_192 0.025 Archaeplastida Compare
Picea abies HCCA Cluster_238 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_256 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_360 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_393 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_420 0.025 Archaeplastida Compare
Picea abies HCCA Cluster_437 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_513 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_520 0.024 Archaeplastida Compare
Oryza sativa HCCA Cluster_40 0.028 Archaeplastida Compare
Oryza sativa HCCA Cluster_94 0.025 Archaeplastida Compare
Oryza sativa HCCA Cluster_96 0.034 Archaeplastida Compare
Oryza sativa HCCA Cluster_141 0.039 Archaeplastida Compare
Oryza sativa HCCA Cluster_151 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_168 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_174 0.035 Archaeplastida Compare
Oryza sativa HCCA Cluster_188 0.034 Archaeplastida Compare
Oryza sativa HCCA Cluster_269 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_297 0.026 Archaeplastida Compare
Oryza sativa HCCA Cluster_347 0.025 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_75 0.026 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_84 0.023 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_106 0.023 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_125 0.028 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_137 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_141 0.029 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_173 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_192 0.02 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_201 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_8 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_22 0.026 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_35 0.029 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_75 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_105 0.028 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_127 0.043 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_140 0.022 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_173 0.03 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_182 0.025 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_223 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_226 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_229 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_233 0.024 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_247 0.029 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_256 0.032 Archaeplastida Compare
Vitis vinifera HCCA Cluster_56 0.029 Archaeplastida Compare
Vitis vinifera HCCA Cluster_84 0.025 Archaeplastida Compare
Vitis vinifera HCCA Cluster_123 0.037 Archaeplastida Compare
Vitis vinifera HCCA Cluster_180 0.026 Archaeplastida Compare
Vitis vinifera HCCA Cluster_211 0.022 Archaeplastida Compare
Vitis vinifera HCCA Cluster_220 0.034 Archaeplastida Compare
Vitis vinifera HCCA Cluster_222 0.043 Archaeplastida Compare
Vitis vinifera HCCA Cluster_232 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_233 0.024 Archaeplastida Compare
Vitis vinifera HCCA Cluster_236 0.032 Archaeplastida Compare
Vitis vinifera HCCA Cluster_238 0.024 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_60 0.021 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_77 0.026 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_95 0.026 Archaeplastida Compare
Sequences (211) (download table)

InterPro Domains

GO Terms

Family Terms