Coexpression cluster: Cluster_347 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006396 RNA processing 8.42% (8/95) 4.51 0.0 1e-06
GO:0016070 RNA metabolic process 10.53% (10/95) 3.53 0.0 2e-06
GO:0090304 nucleic acid metabolic process 11.58% (11/95) 3.05 0.0 8e-06
GO:0034470 ncRNA processing 5.26% (5/95) 4.99 1e-06 3.4e-05
GO:0006139 nucleobase-containing compound metabolic process 11.58% (11/95) 2.69 1e-06 5.6e-05
GO:0006725 cellular aromatic compound metabolic process 11.58% (11/95) 2.55 3e-06 0.000105
GO:0046483 heterocycle metabolic process 11.58% (11/95) 2.56 3e-06 0.000109
GO:1901360 organic cyclic compound metabolic process 11.58% (11/95) 2.51 4e-06 0.000113
GO:0034660 ncRNA metabolic process 5.26% (5/95) 4.11 1.1e-05 0.000312
GO:0034641 cellular nitrogen compound metabolic process 11.58% (11/95) 2.1 5.2e-05 0.001274
GO:0008033 tRNA processing 3.16% (3/95) 4.92 0.000137 0.003039
GO:0008649 rRNA methyltransferase activity 1.05% (1/95) 8.79 0.002252 0.021132
GO:0016435 rRNA (guanine) methyltransferase activity 1.05% (1/95) 8.79 0.002252 0.021132
GO:0000154 rRNA modification 1.05% (1/95) 8.79 0.002252 0.021132
GO:0031167 rRNA methylation 1.05% (1/95) 8.79 0.002252 0.021132
GO:0070476 rRNA (guanine-N7)-methylation 1.05% (1/95) 8.79 0.002252 0.021132
GO:0070475 rRNA base methylation 1.05% (1/95) 8.79 0.002252 0.021132
GO:0036265 RNA (guanine-N7)-methylation 1.05% (1/95) 8.79 0.002252 0.021132
GO:0090730 Las1 complex 1.05% (1/95) 8.79 0.002252 0.021132
GO:0044424 intracellular part 9.47% (9/95) 1.74 0.001499 0.026122
GO:0005515 protein binding 14.74% (14/95) 1.28 0.001765 0.026919
GO:0006399 tRNA metabolic process 3.16% (3/95) 3.69 0.001662 0.027034
GO:0016072 rRNA metabolic process 2.11% (2/95) 5.15 0.001455 0.027313
GO:0006364 rRNA processing 2.11% (2/95) 5.15 0.001455 0.027313
GO:0044464 cell part 9.47% (9/95) 1.69 0.00196 0.02813
GO:0003676 nucleic acid binding 11.58% (11/95) 1.46 0.002129 0.028862
GO:1902555 endoribonuclease complex 1.05% (1/95) 7.79 0.004499 0.031361
GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation 1.05% (1/95) 7.79 0.004499 0.031361
GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation 1.05% (1/95) 7.79 0.004499 0.031361
GO:0000213 tRNA-intron endonuclease activity 1.05% (1/95) 7.79 0.004499 0.031361
GO:1905348 endonuclease complex 1.05% (1/95) 7.79 0.004499 0.031361
GO:0006397 mRNA processing 2.11% (2/95) 4.51 0.003521 0.031823
GO:0009451 RNA modification 2.11% (2/95) 4.47 0.003701 0.032255
GO:0140098 catalytic activity, acting on RNA 4.21% (4/95) 2.65 0.003912 0.032915
GO:0003723 RNA binding 4.21% (4/95) 2.63 0.004111 0.033437
GO:0016071 mRNA metabolic process 2.11% (2/95) 4.24 0.005078 0.034414
GO:1990234 transferase complex 2.11% (2/95) 4.21 0.005291 0.034889
GO:1905354 exoribonuclease complex 1.05% (1/95) 7.21 0.00674 0.04328
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_39 0.03 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_42 0.021 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_49 0.027 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_54 0.021 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_72 0.027 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_80 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_109 0.025 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_122 0.034 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_147 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_152 0.024 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_160 0.024 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_166 0.041 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_168 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_183 0.023 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_226 0.032 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_232 0.031 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_233 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_252 0.038 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_262 0.021 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_67 0.022 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_74 0.025 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_106 0.026 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_128 0.031 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_129 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_144 0.03 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_194 0.034 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_231 0.025 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_235 0.022 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_248 0.023 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_259 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_263 0.029 Archaeplastida Compare
Gingko biloba HCCA Cluster_4 0.025 Archaeplastida Compare
Gingko biloba HCCA Cluster_77 0.021 Archaeplastida Compare
Gingko biloba HCCA Cluster_97 0.025 Archaeplastida Compare
Gingko biloba HCCA Cluster_116 0.021 Archaeplastida Compare
Gingko biloba HCCA Cluster_131 0.046 Archaeplastida Compare
Gingko biloba HCCA Cluster_235 0.021 Archaeplastida Compare
Gingko biloba HCCA Cluster_315 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_319 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_327 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_329 0.024 Archaeplastida Compare
Gingko biloba HCCA Cluster_331 0.029 Archaeplastida Compare
Zea mays HCCA Cluster_6 0.03 Archaeplastida Compare
Zea mays HCCA Cluster_56 0.03 Archaeplastida Compare
Zea mays HCCA Cluster_110 0.03 Archaeplastida Compare
Zea mays HCCA Cluster_131 0.026 Archaeplastida Compare
Zea mays HCCA Cluster_158 0.04 Archaeplastida Compare
Zea mays HCCA Cluster_181 0.024 Archaeplastida Compare
Zea mays HCCA Cluster_201 0.026 Archaeplastida Compare
Zea mays HCCA Cluster_202 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_216 0.032 Archaeplastida Compare
Zea mays HCCA Cluster_225 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_229 0.029 Archaeplastida Compare
Zea mays HCCA Cluster_250 0.024 Archaeplastida Compare
Zea mays HCCA Cluster_261 0.055 Archaeplastida Compare
Zea mays HCCA Cluster_267 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_275 0.041 Archaeplastida Compare
Zea mays HCCA Cluster_276 0.028 Archaeplastida Compare
Zea mays HCCA Cluster_294 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_345 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_354 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_358 0.034 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_85 0.02 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_110 0.033 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_153 0.021 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_163 0.03 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_168 0.029 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_95 0.048 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_109 0.027 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_114 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_167 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_193 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_237 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_261 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_290 0.029 Archaeplastida Compare
Picea abies HCCA Cluster_19 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_84 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_93 0.03 Archaeplastida Compare
Picea abies HCCA Cluster_156 0.025 Archaeplastida Compare
Picea abies HCCA Cluster_321 0.045 Archaeplastida Compare
Picea abies HCCA Cluster_372 0.024 Archaeplastida Compare
Picea abies HCCA Cluster_398 0.027 Archaeplastida Compare
Picea abies HCCA Cluster_402 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_403 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_451 0.025 Archaeplastida Compare
Picea abies HCCA Cluster_472 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_473 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_481 0.026 Archaeplastida Compare
Picea abies HCCA Cluster_486 0.03 Archaeplastida Compare
Picea abies HCCA Cluster_495 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_520 0.026 Archaeplastida Compare
Oryza sativa HCCA Cluster_41 0.026 Archaeplastida Compare
Oryza sativa HCCA Cluster_94 0.026 Archaeplastida Compare
Oryza sativa HCCA Cluster_117 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_161 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_174 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_242 0.025 Archaeplastida Compare
Oryza sativa HCCA Cluster_254 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_257 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_297 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_302 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_315 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_319 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_336 0.025 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_3 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_11 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_137 0.028 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_192 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_199 0.028 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_75 0.024 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_105 0.043 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_118 0.023 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_127 0.026 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_131 0.026 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_158 0.027 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_159 0.034 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_207 0.023 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_223 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_243 0.032 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_247 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_251 0.028 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_283 0.023 Archaeplastida Compare
Vitis vinifera HCCA Cluster_59 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_87 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_119 0.021 Archaeplastida Compare
Vitis vinifera HCCA Cluster_123 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_196 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_197 0.035 Archaeplastida Compare
Vitis vinifera HCCA Cluster_219 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_221 0.027 Archaeplastida Compare
Vitis vinifera HCCA Cluster_236 0.028 Archaeplastida Compare
Vitis vinifera HCCA Cluster_247 0.022 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_22 0.019 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_50 0.022 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_60 0.032 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_112 0.021 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_122 0.023 Archaeplastida Compare
Sequences (95) (download table)

InterPro Domains

GO Terms

Family Terms