Coexpression cluster: Cluster_233 (HCCA)

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0009539 photosystem II reaction center 5.97% (4/67) 8.3 0.0 0.0
GO:0009521 photosystem 8.96% (6/67) 5.88 0.0 0.0
GO:0044436 thylakoid part 8.96% (6/67) 5.73 0.0 0.0
GO:0098796 membrane protein complex 10.45% (7/67) 4.64 0.0 1e-06
GO:0042549 photosystem II stabilization 4.48% (3/67) 8.56 0.0 1e-06
GO:0042548 regulation of photosynthesis, light reaction 4.48% (3/67) 8.56 0.0 1e-06
GO:0010109 regulation of photosynthesis 4.48% (3/67) 8.56 0.0 1e-06
GO:0043467 regulation of generation of precursor metabolites and energy 4.48% (3/67) 8.56 0.0 1e-06
GO:0015979 photosynthesis 7.46% (5/67) 5.45 0.0 3e-06
GO:0009523 photosystem II 5.97% (4/67) 5.81 1e-06 1.7e-05
GO:0032991 protein-containing complex 11.94% (8/67) 2.61 4.8e-05 0.000893
GO:0006812 cation transport 7.46% (5/67) 3.5 8.4e-05 0.00144
GO:0009055 electron transfer activity 5.97% (4/67) 4.04 0.000107 0.001683
GO:0009141 nucleoside triphosphate metabolic process 4.48% (3/67) 4.39 0.000407 0.002983
GO:0009126 purine nucleoside monophosphate metabolic process 4.48% (3/67) 4.41 0.000394 0.002994
GO:0009123 nucleoside monophosphate metabolic process 4.48% (3/67) 4.41 0.000394 0.002994
GO:0009167 purine ribonucleoside monophosphate metabolic process 4.48% (3/67) 4.41 0.000394 0.002994
GO:0009161 ribonucleoside monophosphate metabolic process 4.48% (3/67) 4.41 0.000394 0.002994
GO:1902600 proton transmembrane transport 4.48% (3/67) 4.71 0.000211 0.003091
GO:0009144 purine nucleoside triphosphate metabolic process 4.48% (3/67) 4.44 0.000369 0.003287
GO:0009199 ribonucleoside triphosphate metabolic process 4.48% (3/67) 4.44 0.000369 0.003287
GO:0009205 purine ribonucleoside triphosphate metabolic process 4.48% (3/67) 4.44 0.000369 0.003287
GO:0044425 membrane part 10.45% (7/67) 2.4 0.00036 0.00369
GO:0019684 photosynthesis, light reaction 2.99% (2/67) 6.3 0.000294 0.003765
GO:0098655 cation transmembrane transport 4.48% (3/67) 4.1 0.000732 0.003846
GO:0098660 inorganic ion transmembrane transport 4.48% (3/67) 4.1 0.000732 0.003846
GO:0098662 inorganic cation transmembrane transport 4.48% (3/67) 4.1 0.000732 0.003846
GO:0046034 ATP metabolic process 4.48% (3/67) 4.46 0.000357 0.003847
GO:0044464 cell part 11.94% (8/67) 2.02 0.000769 0.003939
GO:0006811 ion transport 7.46% (5/67) 3.11 0.00029 0.00396
GO:0009259 ribonucleotide metabolic process 4.48% (3/67) 4.18 0.000622 0.003982
GO:0009150 purine ribonucleotide metabolic process 4.48% (3/67) 4.18 0.000622 0.003982
GO:0005575 cellular_component 19.4% (13/67) 1.57 0.000351 0.003997
GO:0009767 photosynthetic electron transport chain 2.99% (2/67) 6.21 0.000333 0.004012
GO:0015672 monovalent inorganic cation transport 4.48% (3/67) 4.23 0.000571 0.004035
GO:0072521 purine-containing compound metabolic process 4.48% (3/67) 4.12 0.000713 0.004057
GO:0019693 ribose phosphate metabolic process 4.48% (3/67) 4.12 0.000713 0.004057
GO:0044424 intracellular part 11.94% (8/67) 2.08 0.000595 0.004063
GO:0006163 purine nucleotide metabolic process 4.48% (3/67) 4.14 0.000675 0.004071
GO:0022900 electron transport chain 2.99% (2/67) 5.71 0.00067 0.004165
GO:0034220 ion transmembrane transport 4.48% (3/67) 3.96 0.000964 0.004821
GO:0009117 nucleotide metabolic process 4.48% (3/67) 3.88 0.001134 0.005535
GO:0006753 nucleoside phosphate metabolic process 4.48% (3/67) 3.85 0.001212 0.005779
GO:0015986 ATP synthesis coupled proton transport 2.99% (2/67) 5.25 0.001271 0.005789
GO:0015985 energy coupled proton transport, down electrochemical gradient 2.99% (2/67) 5.25 0.001271 0.005789
GO:0017144 drug metabolic process 4.48% (3/67) 3.64 0.001855 0.008092
GO:0055086 nucleobase-containing small molecule metabolic process 4.48% (3/67) 3.65 0.001821 0.008113
GO:0022890 inorganic cation transmembrane transporter activity 4.48% (3/67) 3.57 0.002109 0.009005
GO:0016020 membrane 8.96% (6/67) 2.13 0.002506 0.010483
GO:1901135 carbohydrate derivative metabolic process 4.48% (3/67) 3.42 0.002811 0.011524
GO:0004134 4-alpha-glucanotransferase activity 1.49% (1/67) 8.3 0.003174 0.012512
GO:0004133 glycogen debranching enzyme activity 1.49% (1/67) 8.3 0.003174 0.012512
GO:0008324 cation transmembrane transporter activity 4.48% (3/67) 3.32 0.003434 0.013283
GO:0019637 organophosphate metabolic process 4.48% (3/67) 3.2 0.004368 0.016583
GO:0006091 generation of precursor metabolites and energy 2.99% (2/67) 4.25 0.004991 0.018603
GO:0008152 metabolic process 26.87% (18/67) 0.91 0.005242 0.01919
GO:0009058 biosynthetic process 8.96% (6/67) 1.89 0.00551 0.019818
GO:0009156 ribonucleoside monophosphate biosynthetic process 2.99% (2/67) 3.99 0.007075 0.021019
GO:0009168 purine ribonucleoside monophosphate biosynthetic process 2.99% (2/67) 3.99 0.007075 0.021019
GO:0009127 purine nucleoside monophosphate biosynthetic process 2.99% (2/67) 3.99 0.007075 0.021019
GO:0009124 nucleoside monophosphate biosynthetic process 2.99% (2/67) 3.99 0.007075 0.021019
GO:0044281 small molecule metabolic process 5.97% (4/67) 2.47 0.005947 0.021021
GO:0009142 nucleoside triphosphate biosynthetic process 2.99% (2/67) 4.05 0.006564 0.021026
GO:0006754 ATP biosynthetic process 2.99% (2/67) 4.05 0.006564 0.021026
GO:0009145 purine nucleoside triphosphate biosynthetic process 2.99% (2/67) 4.05 0.006564 0.021026
GO:0009201 ribonucleoside triphosphate biosynthetic process 2.99% (2/67) 4.05 0.006564 0.021026
GO:0009206 purine ribonucleoside triphosphate biosynthetic process 2.99% (2/67) 4.05 0.006564 0.021026
GO:0015318 inorganic molecular entity transmembrane transporter activity 4.48% (3/67) 3.01 0.006215 0.021594
GO:0009260 ribonucleotide biosynthetic process 2.99% (2/67) 3.94 0.007602 0.021646
GO:0046390 ribose phosphate biosynthetic process 2.99% (2/67) 3.94 0.007602 0.021646
GO:0009152 purine ribonucleotide biosynthetic process 2.99% (2/67) 3.94 0.007602 0.021646
GO:0055085 transmembrane transport 7.46% (5/67) 2.07 0.00687 0.021667
GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity 1.49% (1/67) 6.98 0.007916 0.022229
GO:0006164 purine nucleotide biosynthetic process 2.99% (2/67) 3.89 0.008147 0.022571
GO:0072522 purine-containing compound biosynthetic process 2.99% (2/67) 3.86 0.00852 0.023289
GO:0015075 ion transmembrane transporter activity 4.48% (3/67) 2.83 0.008821 0.023485
GO:0046873 metal ion transmembrane transporter activity 2.99% (2/67) 3.84 0.00871 0.023493
GO:0044237 cellular metabolic process 17.91% (12/67) 1.08 0.009802 0.025761
GO:1901293 nucleoside phosphate biosynthetic process 2.99% (2/67) 3.61 0.011771 0.030163
GO:0009165 nucleotide biosynthetic process 2.99% (2/67) 3.61 0.011771 0.030163
GO:1901137 carbohydrate derivative biosynthetic process 2.99% (2/67) 3.6 0.01199 0.030344
GO:0016168 chlorophyll binding 1.49% (1/67) 6.3 0.012635 0.030474
GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity 1.49% (1/67) 6.3 0.012635 0.030474
GO:0009772 photosynthetic electron transport in photosystem II 1.49% (1/67) 6.3 0.012635 0.030474
GO:0016779 nucleotidyltransferase activity 2.99% (2/67) 3.57 0.012432 0.03108
GO:0009579 thylakoid 1.49% (1/67) 5.84 0.017333 0.040842
GO:0009522 photosystem I 1.49% (1/67) 5.84 0.017333 0.040842
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_2 0.023 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_92 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_107 0.097 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_146 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_163 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_177 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_92 0.072 Archaeplastida Compare
Gingko biloba HCCA Cluster_78 0.035 Archaeplastida Compare
Gingko biloba HCCA Cluster_224 0.024 Archaeplastida Compare
Zea mays HCCA Cluster_109 0.026 Archaeplastida Compare
Zea mays HCCA Cluster_142 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_160 0.069 Archaeplastida Compare
Zea mays HCCA Cluster_255 0.025 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_8 0.019 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_106 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_121 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_275 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_489 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_3 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_9 0.026 Archaeplastida Compare
Oryza sativa HCCA Cluster_35 0.026 Archaeplastida Compare
Oryza sativa HCCA Cluster_119 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_123 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_125 0.101 Archaeplastida Compare
Oryza sativa HCCA Cluster_156 0.024 Archaeplastida Compare
Oryza sativa HCCA Cluster_171 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_196 0.029 Archaeplastida Compare
Oryza sativa HCCA Cluster_287 0.021 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_27 0.047 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_3 0.038 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_5 0.062 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_76 0.031 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_83 0.06 Archaeplastida Compare
Vitis vinifera HCCA Cluster_73 0.024 Archaeplastida Compare
Vitis vinifera HCCA Cluster_128 0.033 Archaeplastida Compare
Vitis vinifera HCCA Cluster_136 0.024 Archaeplastida Compare
Vitis vinifera HCCA Cluster_169 0.022 Archaeplastida Compare
Vitis vinifera HCCA Cluster_235 0.026 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_36 0.022 Archaeplastida Compare
Sequences (67) (download table)

InterPro Domains

GO Terms

Family Terms