Coexpression cluster: Cluster_92 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0009767 photosynthetic electron transport chain 19.23% (10/52) 8.77 0.0 0.0
GO:0019684 photosynthesis, light reaction 19.23% (10/52) 8.77 0.0 0.0
GO:0022900 electron transport chain 21.15% (11/52) 8.1 0.0 0.0
GO:0098796 membrane protein complex 28.85% (15/52) 5.78 0.0 0.0
GO:0006091 generation of precursor metabolites and energy 21.15% (11/52) 6.77 0.0 0.0
GO:0009521 photosystem 19.23% (10/52) 6.97 0.0 0.0
GO:0044436 thylakoid part 19.23% (10/52) 6.87 0.0 0.0
GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity 13.46% (7/52) 8.67 0.0 0.0
GO:0009772 photosynthetic electron transport in photosystem II 13.46% (7/52) 8.67 0.0 0.0
GO:0044237 cellular metabolic process 55.77% (29/52) 2.7 0.0 0.0
GO:0009579 thylakoid 11.54% (6/52) 9.04 0.0 0.0
GO:0009987 cellular process 55.77% (29/52) 2.37 0.0 0.0
GO:0032991 protein-containing complex 32.69% (17/52) 3.74 0.0 0.0
GO:0009522 photosystem I 11.54% (6/52) 7.81 0.0 0.0
GO:0044425 membrane part 28.85% (15/52) 3.7 0.0 0.0
GO:0008152 metabolic process 61.54% (32/52) 1.89 0.0 0.0
GO:0015979 photosynthesis 13.46% (7/52) 6.49 0.0 0.0
GO:0008150 biological_process 65.38% (34/52) 1.49 0.0 0.0
GO:0003899 DNA-directed 5'-3' RNA polymerase activity 11.54% (6/52) 5.89 0.0 0.0
GO:0034062 5'-3' RNA polymerase activity 11.54% (6/52) 5.76 0.0 0.0
GO:0097747 RNA polymerase activity 11.54% (6/52) 5.76 0.0 0.0
GO:0006351 transcription, DNA-templated 11.54% (6/52) 5.49 0.0 0.0
GO:0097659 nucleic acid-templated transcription 11.54% (6/52) 5.49 0.0 0.0
GO:0016168 chlorophyll binding 5.77% (3/52) 9.04 0.0 0.0
GO:1902600 proton transmembrane transport 9.62% (5/52) 6.11 0.0 0.0
GO:0055114 oxidation-reduction process 25.0% (13/52) 2.84 0.0 0.0
GO:0044424 intracellular part 26.92% (14/52) 2.63 0.0 0.0
GO:0032774 RNA biosynthetic process 11.54% (6/52) 4.94 0.0 0.0
GO:0034654 nucleobase-containing compound biosynthetic process 13.46% (7/52) 4.29 0.0 0.0
GO:0005575 cellular_component 36.54% (19/52) 1.99 0.0 1e-06
GO:0016779 nucleotidyltransferase activity 11.54% (6/52) 4.76 0.0 1e-06
GO:0044271 cellular nitrogen compound biosynthetic process 17.31% (9/52) 3.39 0.0 1e-06
GO:0098662 inorganic cation transmembrane transport 9.62% (5/52) 5.15 0.0 2e-06
GO:0098660 inorganic ion transmembrane transport 9.62% (5/52) 5.15 0.0 2e-06
GO:0098655 cation transmembrane transport 9.62% (5/52) 5.15 0.0 2e-06
GO:0044464 cell part 26.92% (14/52) 2.37 0.0 2e-06
GO:0034220 ion transmembrane transport 9.62% (5/52) 5.13 0.0 2e-06
GO:0015672 monovalent inorganic cation transport 9.62% (5/52) 5.07 0.0 2e-06
GO:0034645 cellular macromolecule biosynthetic process 15.38% (8/52) 3.53 0.0 2e-06
GO:0019438 aromatic compound biosynthetic process 13.46% (7/52) 3.9 0.0 2e-06
GO:0018130 heterocycle biosynthetic process 13.46% (7/52) 3.88 0.0 2e-06
GO:0034641 cellular nitrogen compound metabolic process 21.15% (11/52) 2.69 1e-06 4e-06
GO:1901362 organic cyclic compound biosynthetic process 13.46% (7/52) 3.75 1e-06 4e-06
GO:0140098 catalytic activity, acting on RNA 11.54% (6/52) 4.2 1e-06 4e-06
GO:0009059 macromolecule biosynthetic process 15.38% (8/52) 3.39 1e-06 4e-06
GO:0006139 nucleobase-containing compound metabolic process 17.31% (9/52) 3.01 1e-06 7e-06
GO:0006725 cellular aromatic compound metabolic process 17.31% (9/52) 2.83 4e-06 1.7e-05
GO:0046034 ATP metabolic process 7.69% (4/52) 5.23 4e-06 1.7e-05
GO:0046483 heterocycle metabolic process 17.31% (9/52) 2.84 4e-06 1.8e-05
GO:0009055 electron transfer activity 13.46% (7/52) 3.41 4e-06 1.8e-05
GO:1901360 organic cyclic compound metabolic process 17.31% (9/52) 2.79 5e-06 2.1e-05
GO:0009144 purine nucleoside triphosphate metabolic process 7.69% (4/52) 5.08 6e-06 2.4e-05
GO:0009199 ribonucleoside triphosphate metabolic process 7.69% (4/52) 5.08 6e-06 2.4e-05
GO:0009205 purine ribonucleoside triphosphate metabolic process 7.69% (4/52) 5.08 6e-06 2.4e-05
GO:0009141 nucleoside triphosphate metabolic process 7.69% (4/52) 5.06 6e-06 2.4e-05
GO:0009167 purine ribonucleoside monophosphate metabolic process 7.69% (4/52) 5.06 6e-06 2.4e-05
GO:0009126 purine nucleoside monophosphate metabolic process 7.69% (4/52) 5.06 6e-06 2.4e-05
GO:0009161 ribonucleoside monophosphate metabolic process 7.69% (4/52) 5.01 7e-06 2.7e-05
GO:0009123 nucleoside monophosphate metabolic process 7.69% (4/52) 4.99 8e-06 2.7e-05
GO:0044249 cellular biosynthetic process 17.31% (9/52) 2.72 8e-06 2.7e-05
GO:0015991 ATP hydrolysis coupled proton transport 5.77% (3/52) 6.16 1e-05 3.1e-05
GO:0099132 ATP hydrolysis coupled cation transmembrane transport 5.77% (3/52) 6.16 1e-05 3.1e-05
GO:0099131 ATP hydrolysis coupled ion transmembrane transport 5.77% (3/52) 6.16 1e-05 3.1e-05
GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain 5.77% (3/52) 6.16 1e-05 3.1e-05
GO:0015988 energy coupled proton transmembrane transport, against electrochemical gradient 5.77% (3/52) 6.16 1e-05 3.1e-05
GO:0090662 ATP hydrolysis coupled transmembrane transport 5.77% (3/52) 6.16 1e-05 3.1e-05
GO:1901576 organic substance biosynthetic process 17.31% (9/52) 2.65 1.1e-05 3.6e-05
GO:0009150 purine ribonucleotide metabolic process 7.69% (4/52) 4.83 1.2e-05 3.8e-05
GO:0009259 ribonucleotide metabolic process 7.69% (4/52) 4.79 1.4e-05 4.2e-05
GO:0006163 purine nucleotide metabolic process 7.69% (4/52) 4.77 1.4e-05 4.3e-05
GO:0072521 purine-containing compound metabolic process 7.69% (4/52) 4.75 1.5e-05 4.5e-05
GO:0016070 RNA metabolic process 11.54% (6/52) 3.38 2.4e-05 6.9e-05
GO:0019693 ribose phosphate metabolic process 7.69% (4/52) 4.55 2.6e-05 7.7e-05
GO:0016021 integral component of membrane 13.46% (7/52) 2.98 2.7e-05 7.8e-05
GO:0031224 intrinsic component of membrane 13.46% (7/52) 2.96 3e-05 8.6e-05
GO:0006812 cation transport 9.62% (5/52) 3.77 3.2e-05 9e-05
GO:0009058 biosynthetic process 17.31% (9/52) 2.45 3.3e-05 9.1e-05
GO:0009117 nucleotide metabolic process 7.69% (4/52) 4.42 3.7e-05 0.0001
GO:0016491 oxidoreductase activity 19.23% (10/52) 2.25 3.8e-05 0.000102
GO:0006753 nucleoside phosphate metabolic process 7.69% (4/52) 4.35 4.5e-05 0.000119
GO:0017144 drug metabolic process 7.69% (4/52) 4.17 7.4e-05 0.000193
GO:0016651 oxidoreductase activity, acting on NAD(P)H 5.77% (3/52) 5.2 7.6e-05 0.000197
GO:0006811 ion transport 9.62% (5/52) 3.5 8e-05 0.000203
GO:0055086 nucleobase-containing small molecule metabolic process 7.69% (4/52) 4.11 8.7e-05 0.000219
GO:0097159 organic cyclic compound binding 30.77% (16/52) 1.45 0.000125 0.000308
GO:1901363 heterocyclic compound binding 30.77% (16/52) 1.45 0.000125 0.000311
GO:0090304 nucleic acid metabolic process 11.54% (6/52) 2.83 0.000191 0.000465
GO:0003674 molecular_function 57.69% (30/52) 0.81 0.000204 0.000491
GO:1901135 carbohydrate derivative metabolic process 7.69% (4/52) 3.78 0.000208 0.000495
GO:0019637 organophosphate metabolic process 7.69% (4/52) 3.66 0.000284 0.000668
GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain 3.85% (2/52) 6.23 0.000319 0.000743
GO:0015078 proton transmembrane transporter activity 5.77% (3/52) 4.45 0.000354 0.000815
GO:0015985 energy coupled proton transport, down electrochemical gradient 3.85% (2/52) 6.04 0.000419 0.000946
GO:0015986 ATP synthesis coupled proton transport 3.85% (2/52) 6.04 0.000419 0.000946
GO:0048038 quinone binding 3.85% (2/52) 5.95 0.000475 0.001059
GO:0003677 DNA binding 11.54% (6/52) 2.37 0.001039 0.002295
GO:0015077 monovalent inorganic cation transmembrane transporter activity 5.77% (3/52) 3.87 0.001154 0.002522
GO:0051287 NAD binding 3.85% (2/52) 5.23 0.001302 0.002816
GO:0055085 transmembrane transport 9.62% (5/52) 2.6 0.001364 0.002922
GO:0022890 inorganic cation transmembrane transporter activity 5.77% (3/52) 3.42 0.002783 0.0059
GO:0006807 nitrogen compound metabolic process 21.15% (11/52) 1.36 0.002902 0.006092
GO:0005488 binding 36.54% (19/52) 0.89 0.003481 0.007235
GO:0006754 ATP biosynthetic process 3.85% (2/52) 4.45 0.003792 0.007729
GO:0008324 cation transmembrane transporter activity 5.77% (3/52) 3.26 0.003786 0.007793
GO:0009142 nucleoside triphosphate biosynthetic process 3.85% (2/52) 4.31 0.004604 0.009037
GO:0009206 purine ribonucleoside triphosphate biosynthetic process 3.85% (2/52) 4.31 0.004604 0.009037
GO:0009201 ribonucleoside triphosphate biosynthetic process 3.85% (2/52) 4.31 0.004604 0.009037
GO:0009145 purine nucleoside triphosphate biosynthetic process 3.85% (2/52) 4.31 0.004604 0.009037
GO:0003824 catalytic activity 34.62% (18/52) 0.89 0.004667 0.009076
GO:0009127 purine nucleoside monophosphate biosynthetic process 3.85% (2/52) 4.26 0.004949 0.009453
GO:0009168 purine ribonucleoside monophosphate biosynthetic process 3.85% (2/52) 4.26 0.004949 0.009453
GO:0009156 ribonucleoside monophosphate biosynthetic process 3.85% (2/52) 4.2 0.005307 0.010044
GO:0009124 nucleoside monophosphate biosynthetic process 3.85% (2/52) 4.18 0.005489 0.010299
GO:0044260 cellular macromolecule metabolic process 15.38% (8/52) 1.54 0.005586 0.010388
GO:0016984 ribulose-bisphosphate carboxylase activity 1.92% (1/52) 7.45 0.005701 0.010509
GO:0009152 purine ribonucleotide biosynthetic process 3.85% (2/52) 4.13 0.005864 0.010716
GO:0006412 translation 5.77% (3/52) 3.0 0.0063 0.011038
GO:0046390 ribose phosphate biosynthetic process 3.85% (2/52) 4.08 0.006249 0.011041
GO:0009260 ribonucleotide biosynthetic process 3.85% (2/52) 4.08 0.006249 0.011041
GO:0005840 ribosome 5.77% (3/52) 3.01 0.006125 0.011099
GO:0015318 inorganic molecular entity transmembrane transporter activity 5.77% (3/52) 3.01 0.006212 0.011161
GO:0006164 purine nucleotide biosynthetic process 3.85% (2/52) 4.06 0.006446 0.011202
GO:0003735 structural constituent of ribosome 5.77% (3/52) 2.97 0.006658 0.011383
GO:0043043 peptide biosynthetic process 5.77% (3/52) 2.96 0.006749 0.011447
GO:0072522 purine-containing compound biosynthetic process 3.85% (2/52) 4.04 0.006646 0.011456
GO:1901566 organonitrogen compound biosynthetic process 7.69% (4/52) 2.41 0.006812 0.011461
GO:0000287 magnesium ion binding 3.85% (2/52) 3.95 0.007474 0.012476
GO:0042773 ATP synthesis coupled electron transport 1.92% (1/52) 7.04 0.007594 0.012578
GO:0016772 transferase activity, transferring phosphorus-containing groups 11.54% (6/52) 1.78 0.007782 0.01279
GO:0015075 ion transmembrane transporter activity 5.77% (3/52) 2.88 0.007905 0.012891
GO:0043604 amide biosynthetic process 5.77% (3/52) 2.84 0.008524 0.013794
GO:0009165 nucleotide biosynthetic process 3.85% (2/52) 3.83 0.008797 0.014023
GO:0048037 cofactor binding 9.62% (5/52) 1.97 0.008797 0.014129
GO:1990904 ribonucleoprotein complex 5.77% (3/52) 2.81 0.008952 0.014162
GO:0044281 small molecule metabolic process 7.69% (4/52) 2.29 0.009044 0.014203
GO:0006518 peptide metabolic process 5.77% (3/52) 2.78 0.009504 0.0146
GO:1901293 nucleoside phosphate biosynthetic process 3.85% (2/52) 3.77 0.009496 0.014694
GO:0015977 carbon fixation 1.92% (1/52) 6.71 0.009484 0.014784
GO:0005198 structural molecule activity 5.77% (3/52) 2.77 0.00973 0.014841
GO:0071704 organic substance metabolic process 23.08% (12/52) 1.06 0.009845 0.014908
GO:0043232 intracellular non-membrane-bounded organelle 5.77% (3/52) 2.75 0.010193 0.015217
GO:0043228 non-membrane-bounded organelle 5.77% (3/52) 2.75 0.010193 0.015217
GO:0016020 membrane 9.62% (5/52) 1.9 0.010867 0.016111
GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) 1.92% (1/52) 6.45 0.01137 0.016739
GO:0043603 cellular amide metabolic process 5.77% (3/52) 2.64 0.012299 0.017859
GO:1901137 carbohydrate derivative biosynthetic process 3.85% (2/52) 3.58 0.012259 0.017923
GO:0043168 anion binding 15.38% (8/52) 1.34 0.012844 0.018523
GO:0022904 respiratory electron transport chain 1.92% (1/52) 6.23 0.013253 0.018983
GO:0046933 proton-transporting ATP synthase activity, rotational mechanism 1.92% (1/52) 6.04 0.015132 0.021244
GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) 1.92% (1/52) 6.04 0.015132 0.021244
GO:0043167 ion binding 21.15% (11/52) 1.04 0.015087 0.021466
GO:0044238 primary metabolic process 21.15% (11/52) 1.02 0.016475 0.022979
GO:0006810 transport 9.62% (5/52) 1.69 0.019126 0.026501
GO:0090407 organophosphate biosynthetic process 3.85% (2/52) 3.23 0.019339 0.026622
GO:0051234 establishment of localization 9.62% (5/52) 1.68 0.019491 0.026658
GO:0050136 NADH dehydrogenase (quinone) activity 1.92% (1/52) 5.58 0.020748 0.02732
GO:0008137 NADH dehydrogenase (ubiquinone) activity 1.92% (1/52) 5.58 0.020748 0.02732
GO:0003954 NADH dehydrogenase activity 1.92% (1/52) 5.58 0.020748 0.02732
GO:0046961 proton-transporting ATPase activity, rotational mechanism 1.92% (1/52) 5.58 0.020748 0.02732
GO:0036442 proton-exporting ATPase activity 1.92% (1/52) 5.58 0.020748 0.02732
GO:0051179 localization 9.62% (5/52) 1.66 0.020517 0.027882
GO:0019829 cation-transporting ATPase activity 1.92% (1/52) 5.23 0.026333 0.033834
GO:0042625 ATPase coupled ion transmembrane transporter activity 1.92% (1/52) 5.23 0.026333 0.033834
GO:0022853 active ion transmembrane transporter activity 1.92% (1/52) 5.23 0.026333 0.033834
GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism 1.92% (1/52) 5.23 0.026333 0.033834
GO:0003676 nucleic acid binding 11.54% (6/52) 1.37 0.027751 0.03544
GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor 1.92% (1/52) 5.13 0.028188 0.035783
GO:0046906 tetrapyrrole binding 5.77% (3/52) 2.1 0.032992 0.041633
GO:0000166 nucleotide binding 13.46% (7/52) 1.18 0.033667 0.041739
GO:1901265 nucleoside phosphate binding 13.46% (7/52) 1.18 0.033667 0.041739
GO:0043170 macromolecule metabolic process 15.38% (8/52) 1.08 0.033501 0.042026
GO:0022857 transmembrane transporter activity 5.77% (3/52) 2.04 0.036242 0.04467
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_2 0.037 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_61 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_107 0.197 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_3 0.021 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_87 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_93 0.03 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_97 0.021 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_199 0.021 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_219 0.02 Archaeplastida Compare
Gingko biloba HCCA Cluster_30 0.04 Archaeplastida Compare
Gingko biloba HCCA Cluster_78 0.105 Archaeplastida Compare
Gingko biloba HCCA Cluster_89 0.053 Archaeplastida Compare
Gingko biloba HCCA Cluster_297 0.041 Archaeplastida Compare
Gingko biloba HCCA Cluster_299 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_44 0.024 Archaeplastida Compare
Zea mays HCCA Cluster_45 0.039 Archaeplastida Compare
Zea mays HCCA Cluster_93 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_109 0.068 Archaeplastida Compare
Zea mays HCCA Cluster_160 0.2 Archaeplastida Compare
Zea mays HCCA Cluster_255 0.091 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_2 0.04 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_8 0.063 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_154 0.028 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_298 0.026 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_236 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_125 0.244 Archaeplastida Compare
Oryza sativa HCCA Cluster_233 0.072 Archaeplastida Compare
Oryza sativa HCCA Cluster_238 0.027 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_27 0.236 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_1 0.022 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_3 0.049 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_4 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_5 0.148 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_16 0.04 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_76 0.037 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_83 0.182 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_84 0.023 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_87 0.024 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_90 0.037 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_93 0.048 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_102 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_113 0.053 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_143 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_149 0.055 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_172 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_174 0.026 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_199 0.032 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_282 0.025 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_287 0.026 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_312 0.023 Archaeplastida Compare
Vitis vinifera HCCA Cluster_25 0.071 Archaeplastida Compare
Vitis vinifera HCCA Cluster_99 0.039 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_37 0.028 Archaeplastida Compare
Sequences (52) (download table)

InterPro Domains

GO Terms

Family Terms