Coexpression cluster: Cluster_77 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006259 DNA metabolic process 12.08% (25/207) 5.1 0.0 0.0
GO:0090304 nucleic acid metabolic process 13.04% (27/207) 3.09 0.0 0.0
GO:0006139 nucleobase-containing compound metabolic process 14.01% (29/207) 2.8 0.0 0.0
GO:0006725 cellular aromatic compound metabolic process 14.01% (29/207) 2.66 0.0 0.0
GO:0046483 heterocycle metabolic process 14.01% (29/207) 2.67 0.0 0.0
GO:1901360 organic cyclic compound metabolic process 14.01% (29/207) 2.62 0.0 0.0
GO:0006260 DNA replication 4.35% (9/207) 5.89 0.0 0.0
GO:0006281 DNA repair 4.83% (10/207) 4.66 0.0 0.0
GO:0033554 cellular response to stress 4.83% (10/207) 4.54 0.0 0.0
GO:0051716 cellular response to stimulus 4.83% (10/207) 4.54 0.0 0.0
GO:0006974 cellular response to DNA damage stimulus 4.83% (10/207) 4.54 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 14.01% (29/207) 2.11 0.0 0.0
GO:0005488 binding 38.65% (80/207) 0.94 0.0 0.0
GO:0006270 DNA replication initiation 2.42% (5/207) 6.51 0.0 0.0
GO:0000808 origin recognition complex 1.93% (4/207) 7.36 0.0 0.0
GO:0005524 ATP binding 14.98% (31/207) 1.81 0.0 0.0
GO:0008144 drug binding 14.98% (31/207) 1.7 0.0 0.0
GO:0044260 cellular macromolecule metabolic process 17.39% (36/207) 1.51 0.0 0.0
GO:0032559 adenyl ribonucleotide binding 14.98% (31/207) 1.62 0.0 0.0
GO:0030554 adenyl nucleotide binding 14.98% (31/207) 1.62 0.0 0.0
GO:0035639 purine ribonucleoside triphosphate binding 14.98% (31/207) 1.62 0.0 0.0
GO:0000166 nucleotide binding 16.91% (35/207) 1.47 0.0 0.0
GO:1901265 nucleoside phosphate binding 16.91% (35/207) 1.47 0.0 0.0
GO:0003676 nucleic acid binding 14.98% (31/207) 1.6 0.0 0.0
GO:1901363 heterocyclic compound binding 25.6% (53/207) 1.06 0.0 1e-06
GO:0097159 organic cyclic compound binding 25.6% (53/207) 1.06 0.0 1e-06
GO:0036094 small molecule binding 16.91% (35/207) 1.4 0.0 1e-06
GO:0005515 protein binding 16.43% (34/207) 1.42 0.0 1e-06
GO:0140097 catalytic activity, acting on DNA 2.9% (6/207) 4.46 0.0 3e-06
GO:0032555 purine ribonucleotide binding 14.98% (31/207) 1.46 0.0 3e-06
GO:0017076 purine nucleotide binding 14.98% (31/207) 1.45 0.0 3e-06
GO:0032553 ribonucleotide binding 14.98% (31/207) 1.44 0.0 4e-06
GO:0097367 carbohydrate derivative binding 14.98% (31/207) 1.43 1e-06 4e-06
GO:0003677 DNA binding 9.66% (20/207) 1.8 2e-06 1.3e-05
GO:0043170 macromolecule metabolic process 17.87% (37/207) 1.19 2e-06 1.6e-05
GO:0009987 cellular process 22.22% (46/207) 1.02 2e-06 1.7e-05
GO:0043168 anion binding 15.46% (32/207) 1.3 2e-06 1.8e-05
GO:0006807 nitrogen compound metabolic process 18.36% (38/207) 1.1 6e-06 4.2e-05
GO:0044237 cellular metabolic process 18.84% (39/207) 1.04 1.2e-05 8.7e-05
GO:0006950 response to stress 4.83% (10/207) 2.49 1.4e-05 9.8e-05
GO:0005664 nuclear origin of replication recognition complex 0.97% (2/207) 7.36 3.7e-05 0.000251
GO:0008092 cytoskeletal protein binding 2.9% (6/207) 3.19 5.3e-05 0.000356
GO:0003678 DNA helicase activity 1.45% (3/207) 5.25 6e-05 0.000384
GO:0044454 nuclear chromosome part 1.45% (3/207) 5.25 6e-05 0.000384
GO:0008017 microtubule binding 2.42% (5/207) 3.56 6.9e-05 0.000431
GO:0044238 primary metabolic process 19.32% (40/207) 0.89 9.1e-05 0.000551
GO:0015631 tubulin binding 2.42% (5/207) 3.42 0.000109 0.000651
GO:0006284 base-excision repair 1.45% (3/207) 4.86 0.000141 0.000823
GO:0009059 macromolecule biosynthetic process 5.8% (12/207) 1.81 0.000193 0.001104
GO:0071704 organic substance metabolic process 19.32% (40/207) 0.83 0.000214 0.0012
GO:0044427 chromosomal part 2.42% (5/207) 3.08 0.000323 0.001773
GO:0051276 chromosome organization 1.45% (3/207) 4.36 0.000407 0.002192
GO:0007018 microtubule-based movement 1.93% (4/207) 3.48 0.000464 0.002318
GO:0006928 movement of cell or subcellular component 1.93% (4/207) 3.48 0.000464 0.002318
GO:0003777 microtubule motor activity 1.93% (4/207) 3.48 0.000464 0.002318
GO:0034645 cellular macromolecule biosynthetic process 5.31% (11/207) 1.77 0.000446 0.002356
GO:0050896 response to stimulus 4.83% (10/207) 1.85 0.000514 0.002526
GO:0043167 ion binding 17.39% (36/207) 0.81 0.000599 0.002893
GO:0003674 molecular_function 46.38% (96/207) 0.39 0.00066 0.003131
GO:0007017 microtubule-based process 1.93% (4/207) 3.21 0.000935 0.004364
GO:0003774 motor activity 1.93% (4/207) 3.15 0.001092 0.005012
GO:0004386 helicase activity 1.45% (3/207) 3.78 0.001361 0.006146
GO:0005694 chromosome 0.97% (2/207) 5.04 0.0016 0.007113
GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds 0.97% (2/207) 4.9 0.001948 0.008524
GO:0005634 nucleus 2.9% (6/207) 2.19 0.002141 0.009221
GO:0006298 mismatch repair 0.97% (2/207) 4.66 0.002741 0.011455
GO:0030983 mismatched DNA binding 0.97% (2/207) 4.66 0.002741 0.011455
GO:0044428 nuclear part 1.93% (4/207) 2.61 0.004334 0.017846
GO:0004518 nuclease activity 1.93% (4/207) 2.57 0.004776 0.01938
GO:0006996 organelle organization 1.45% (3/207) 3.12 0.00508 0.020319
GO:0043240 Fanconi anaemia nuclear complex 0.48% (1/207) 7.36 0.006075 0.021807
GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity 0.48% (1/207) 7.36 0.006075 0.021807
GO:0003896 DNA primase activity 0.48% (1/207) 7.36 0.006075 0.021807
GO:0000724 double-strand break repair via homologous recombination 0.48% (1/207) 7.36 0.006075 0.021807
GO:0043625 delta DNA polymerase complex 0.48% (1/207) 7.36 0.006075 0.021807
GO:0032299 ribonuclease H2 complex 0.48% (1/207) 7.36 0.006075 0.021807
GO:0042575 DNA polymerase complex 0.48% (1/207) 7.36 0.006075 0.021807
GO:0036297 interstrand cross-link repair 0.48% (1/207) 7.36 0.006075 0.021807
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 3.86% (8/207) 1.53 0.007028 0.02491
GO:0016817 hydrolase activity, acting on acid anhydrides 3.86% (8/207) 1.52 0.007298 0.025542
GO:0044249 cellular biosynthetic process 5.8% (12/207) 1.15 0.00858 0.029659
GO:0044217 other organism part 1.93% (4/207) 2.22 0.010937 0.034027
GO:0033643 host cell part 1.93% (4/207) 2.22 0.010937 0.034027
GO:0033646 host intracellular part 1.93% (4/207) 2.22 0.010937 0.034027
GO:0033647 host intracellular organelle 1.93% (4/207) 2.22 0.010937 0.034027
GO:0033648 host intracellular membrane-bounded organelle 1.93% (4/207) 2.22 0.010937 0.034027
GO:0042025 host cell nucleus 1.93% (4/207) 2.22 0.010937 0.034027
GO:0003682 chromatin binding 0.97% (2/207) 3.72 0.01005 0.034317
GO:1901576 organic substance biosynthetic process 5.8% (12/207) 1.08 0.012217 0.034555
GO:0070403 NAD+ binding 0.48% (1/207) 6.36 0.012113 0.034608
GO:0006275 regulation of DNA replication 0.48% (1/207) 6.36 0.012113 0.034608
GO:0006269 DNA replication, synthesis of RNA primer 0.48% (1/207) 6.36 0.012113 0.034608
GO:0000725 recombinational repair 0.48% (1/207) 6.36 0.012113 0.034608
GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor 0.48% (1/207) 6.36 0.012113 0.034608
GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor 0.48% (1/207) 6.36 0.012113 0.034608
GO:0051301 cell division 0.48% (1/207) 6.36 0.012113 0.034608
GO:0061731 ribonucleoside-diphosphate reductase activity 0.48% (1/207) 6.36 0.012113 0.034608
GO:0009058 biosynthetic process 6.28% (13/207) 1.06 0.010572 0.035665
GO:0016409 palmitoyltransferase activity 0.97% (2/207) 3.66 0.010844 0.036148
GO:0043227 membrane-bounded organelle 2.9% (6/207) 1.63 0.01385 0.038397
GO:0043231 intracellular membrane-bounded organelle 2.9% (6/207) 1.63 0.01385 0.038397
GO:0017111 nucleoside-triphosphatase activity 3.38% (7/207) 1.42 0.016546 0.045421
GO:0007059 chromosome segregation 0.48% (1/207) 5.78 0.018114 0.049243
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_10 0.023 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_11 0.025 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_24 0.031 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_31 0.042 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_50 0.023 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_58 0.065 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_76 0.025 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_87 0.024 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_110 0.147 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_115 0.039 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_133 0.024 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_139 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_145 0.025 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_147 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_152 0.054 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_172 0.047 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_190 0.028 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_221 0.021 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_223 0.021 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_233 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_242 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_257 0.021 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_39 0.024 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_40 0.034 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_44 0.035 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_60 0.137 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_122 0.046 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_158 0.027 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_181 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_190 0.025 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_194 0.023 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_249 0.025 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_255 0.032 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_258 0.022 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_260 0.02 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_271 0.019 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_46 0.07 Archaeplastida Compare
Gingko biloba HCCA Cluster_22 0.151 Archaeplastida Compare
Gingko biloba HCCA Cluster_54 0.049 Archaeplastida Compare
Gingko biloba HCCA Cluster_116 0.024 Archaeplastida Compare
Gingko biloba HCCA Cluster_131 0.048 Archaeplastida Compare
Gingko biloba HCCA Cluster_184 0.037 Archaeplastida Compare
Gingko biloba HCCA Cluster_188 0.078 Archaeplastida Compare
Gingko biloba HCCA Cluster_264 0.024 Archaeplastida Compare
Gingko biloba HCCA Cluster_307 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_1 0.037 Archaeplastida Compare
Zea mays HCCA Cluster_15 0.028 Archaeplastida Compare
Zea mays HCCA Cluster_16 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_29 0.035 Archaeplastida Compare
Zea mays HCCA Cluster_69 0.028 Archaeplastida Compare
Zea mays HCCA Cluster_115 0.153 Archaeplastida Compare
Zea mays HCCA Cluster_175 0.057 Archaeplastida Compare
Zea mays HCCA Cluster_181 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_234 0.039 Archaeplastida Compare
Zea mays HCCA Cluster_250 0.032 Archaeplastida Compare
Zea mays HCCA Cluster_277 0.068 Archaeplastida Compare
Zea mays HCCA Cluster_296 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_309 0.025 Archaeplastida Compare
Zea mays HCCA Cluster_313 0.035 Archaeplastida Compare
Zea mays HCCA Cluster_328 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_344 0.049 Archaeplastida Compare
Zea mays HCCA Cluster_346 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_358 0.025 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_3 0.11 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_19 0.02 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_69 0.088 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_84 0.039 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_116 0.057 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_6 0.043 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_7 0.03 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_8 0.029 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_16 0.028 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_117 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_121 0.044 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_146 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_154 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_184 0.031 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_186 0.021 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_221 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_235 0.031 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_259 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_272 0.029 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_281 0.025 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_287 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_290 0.026 Archaeplastida Compare
Picea abies HCCA Cluster_29 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_76 0.028 Archaeplastida Compare
Picea abies HCCA Cluster_92 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_105 0.025 Archaeplastida Compare
Picea abies HCCA Cluster_149 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_169 0.059 Archaeplastida Compare
Picea abies HCCA Cluster_192 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_194 0.112 Archaeplastida Compare
Picea abies HCCA Cluster_202 0.034 Archaeplastida Compare
Picea abies HCCA Cluster_296 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_335 0.026 Archaeplastida Compare
Picea abies HCCA Cluster_376 0.04 Archaeplastida Compare
Picea abies HCCA Cluster_379 0.059 Archaeplastida Compare
Picea abies HCCA Cluster_458 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_481 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_496 0.026 Archaeplastida Compare
Oryza sativa HCCA Cluster_42 0.028 Archaeplastida Compare
Oryza sativa HCCA Cluster_48 0.034 Archaeplastida Compare
Oryza sativa HCCA Cluster_74 0.031 Archaeplastida Compare
Oryza sativa HCCA Cluster_81 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_87 0.134 Archaeplastida Compare
Oryza sativa HCCA Cluster_97 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_141 0.025 Archaeplastida Compare
Oryza sativa HCCA Cluster_173 0.102 Archaeplastida Compare
Oryza sativa HCCA Cluster_191 0.056 Archaeplastida Compare
Oryza sativa HCCA Cluster_214 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_234 0.024 Archaeplastida Compare
Oryza sativa HCCA Cluster_257 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_269 0.061 Archaeplastida Compare
Oryza sativa HCCA Cluster_297 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_310 0.03 Archaeplastida Compare
Oryza sativa HCCA Cluster_312 0.029 Archaeplastida Compare
Oryza sativa HCCA Cluster_319 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_340 0.043 Archaeplastida Compare
Oryza sativa HCCA Cluster_357 0.02 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_3 0.022 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_75 0.02 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_76 0.025 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_88 0.029 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_133 0.023 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_137 0.046 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_178 0.021 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_192 0.02 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_204 0.026 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_28 0.03 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_35 0.034 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_38 0.034 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_132 0.024 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_206 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_262 0.034 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_281 0.027 Archaeplastida Compare
Vitis vinifera HCCA Cluster_11 0.021 Archaeplastida Compare
Vitis vinifera HCCA Cluster_26 0.063 Archaeplastida Compare
Vitis vinifera HCCA Cluster_44 0.024 Archaeplastida Compare
Vitis vinifera HCCA Cluster_53 0.186 Archaeplastida Compare
Vitis vinifera HCCA Cluster_59 0.023 Archaeplastida Compare
Vitis vinifera HCCA Cluster_60 0.031 Archaeplastida Compare
Vitis vinifera HCCA Cluster_100 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_121 0.023 Archaeplastida Compare
Vitis vinifera HCCA Cluster_123 0.056 Archaeplastida Compare
Vitis vinifera HCCA Cluster_163 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_175 0.023 Archaeplastida Compare
Vitis vinifera HCCA Cluster_186 0.088 Archaeplastida Compare
Vitis vinifera HCCA Cluster_189 0.03 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_10 0.054 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_63 0.058 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_88 0.055 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_110 0.039 Archaeplastida Compare
Sequences (207) (download table)

InterPro Domains

GO Terms

Family Terms