Coexpression cluster: Cluster_34 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0051188 cofactor biosynthetic process 9.09% (5/55) 4.9 1e-06 0.000115
GO:0051186 cofactor metabolic process 9.09% (5/55) 4.57 2e-06 0.000184
GO:0006766 vitamin metabolic process 5.45% (3/55) 5.83 1.9e-05 0.000457
GO:0006767 water-soluble vitamin metabolic process 5.45% (3/55) 5.83 1.9e-05 0.000457
GO:0044283 small molecule biosynthetic process 9.09% (5/55) 4.18 8e-06 0.000464
GO:0042364 water-soluble vitamin biosynthetic process 5.45% (3/55) 5.92 1.5e-05 0.000528
GO:0009110 vitamin biosynthetic process 5.45% (3/55) 5.92 1.5e-05 0.000528
GO:0017144 drug metabolic process 7.27% (4/55) 4.5 2.9e-05 0.000621
GO:0009236 cobalamin biosynthetic process 3.64% (2/55) 7.33 5.6e-05 0.001078
GO:0009235 cobalamin metabolic process 3.64% (2/55) 7.01 9.4e-05 0.001613
GO:0009108 coenzyme biosynthetic process 5.45% (3/55) 4.63 0.000238 0.003723
GO:0006732 coenzyme metabolic process 5.45% (3/55) 4.53 0.000297 0.004258
GO:0044281 small molecule metabolic process 10.91% (6/55) 2.61 0.000424 0.004555
GO:0097159 organic cyclic compound binding 25.45% (14/55) 1.45 0.000406 0.004653
GO:1901363 heterocyclic compound binding 25.45% (14/55) 1.45 0.000406 0.004653
GO:0036094 small molecule binding 20.0% (11/55) 1.72 0.000394 0.005214
GO:0003674 molecular_function 49.09% (27/55) 0.83 0.000567 0.00574
GO:1901566 organonitrogen compound biosynthetic process 9.09% (5/55) 2.74 0.000904 0.008642
GO:0000166 nucleotide binding 18.18% (10/55) 1.66 0.001069 0.009189
GO:1901265 nucleoside phosphate binding 18.18% (10/55) 1.66 0.001069 0.009189
GO:0048037 cofactor binding 9.09% (5/55) 2.63 0.001245 0.010196
GO:0006790 sulfur compound metabolic process 3.64% (2/55) 5.16 0.001399 0.010934
GO:0033014 tetrapyrrole biosynthetic process 3.64% (2/55) 5.09 0.00156 0.01118
GO:0009058 biosynthetic process 12.73% (7/55) 2.03 0.001496 0.011189
GO:0042823 pyridoxal phosphate biosynthetic process 1.82% (1/55) 8.33 0.0031 0.011592
GO:0042819 vitamin B6 biosynthetic process 1.82% (1/55) 8.33 0.0031 0.011592
GO:0046184 aldehyde biosynthetic process 1.82% (1/55) 8.33 0.0031 0.011592
GO:0042816 vitamin B6 metabolic process 1.82% (1/55) 8.33 0.0031 0.011592
GO:0042822 pyridoxal phosphate metabolic process 1.82% (1/55) 8.33 0.0031 0.011592
GO:0051073 adenosylcobinamide-GDP ribazoletransferase activity 1.82% (1/55) 8.33 0.0031 0.011592
GO:0004478 methionine adenosyltransferase activity 1.82% (1/55) 8.33 0.0031 0.011592
GO:0004359 glutaminase activity 1.82% (1/55) 8.33 0.0031 0.011592
GO:0008939 nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity 1.82% (1/55) 8.33 0.0031 0.011592
GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity 1.82% (1/55) 8.33 0.0031 0.011592
GO:0006555 methionine metabolic process 1.82% (1/55) 8.33 0.0031 0.011592
GO:0046500 S-adenosylmethionine metabolic process 1.82% (1/55) 8.33 0.0031 0.011592
GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity 1.82% (1/55) 8.33 0.0031 0.011592
GO:0003848 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity 1.82% (1/55) 8.33 0.0031 0.011592
GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity 1.82% (1/55) 8.33 0.0031 0.011592
GO:0008818 cobalamin 5'-phosphate synthase activity 1.82% (1/55) 8.33 0.0031 0.011592
GO:0031419 cobalamin binding 1.82% (1/55) 8.33 0.0031 0.011592
GO:0006556 S-adenosylmethionine biosynthetic process 1.82% (1/55) 8.33 0.0031 0.011592
GO:0008172 S-methyltransferase activity 1.82% (1/55) 8.33 0.0031 0.011592
GO:0016887 ATPase activity 5.45% (3/55) 3.35 0.00319 0.011675
GO:0005488 binding 30.91% (17/55) 0.98 0.003435 0.01231
GO:0044249 cellular biosynthetic process 10.91% (6/55) 1.99 0.003892 0.013662
GO:0033013 tetrapyrrole metabolic process 3.64% (2/55) 4.87 0.002095 0.014413
GO:0003824 catalytic activity 30.91% (17/55) 1.04 0.002195 0.014519
GO:0008168 methyltransferase activity 5.45% (3/55) 3.2 0.004228 0.014543
GO:1901576 organic substance biosynthetic process 10.91% (6/55) 1.93 0.004685 0.015801
GO:0051287 NAD binding 3.64% (2/55) 4.75 0.002493 0.015881
GO:0008144 drug binding 14.55% (8/55) 1.58 0.00489 0.016175
GO:0016741 transferase activity, transferring one-carbon groups 5.45% (3/55) 3.1 0.005189 0.01684
GO:0009396 folic acid-containing compound biosynthetic process 1.82% (1/55) 7.33 0.006191 0.018359
GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor 3.64% (2/55) 4.09 0.006176 0.018637
GO:0006082 organic acid metabolic process 5.45% (3/55) 3.01 0.00613 0.018829
GO:0043436 oxoacid metabolic process 5.45% (3/55) 3.01 0.00613 0.018829
GO:0016614 oxidoreductase activity, acting on CH-OH group of donors 3.64% (2/55) 4.05 0.006497 0.018941
GO:0019752 carboxylic acid metabolic process 5.45% (3/55) 3.02 0.00599 0.019079
GO:0097367 carbohydrate derivative binding 14.55% (8/55) 1.45 0.008278 0.022965
GO:0032553 ribonucleotide binding 14.55% (8/55) 1.46 0.008028 0.023014
GO:0019438 aromatic compound biosynthetic process 7.27% (4/55) 2.33 0.008228 0.023202
GO:0006760 folic acid-containing compound metabolic process 1.82% (1/55) 6.75 0.009272 0.023453
GO:0016778 diphosphotransferase activity 1.82% (1/55) 6.75 0.009272 0.023453
GO:0015689 molybdate ion transport 1.82% (1/55) 6.75 0.009272 0.023453
GO:0015098 molybdate ion transmembrane transporter activity 1.82% (1/55) 6.75 0.009272 0.023453
GO:0055114 oxidation-reduction process 9.09% (5/55) 1.97 0.008853 0.02417
GO:0018130 heterocycle biosynthetic process 7.27% (4/55) 2.29 0.009024 0.024251
GO:0016491 oxidoreductase activity 9.09% (5/55) 1.92 0.010136 0.024555
GO:1901362 organic cyclic compound biosynthetic process 7.27% (4/55) 2.23 0.010372 0.024777
GO:0050662 coenzyme binding 5.45% (3/55) 2.75 0.010098 0.024812
GO:0043167 ion binding 18.18% (10/55) 1.21 0.009972 0.024858
GO:0008152 metabolic process 25.45% (14/55) 0.93 0.011464 0.027011
GO:0000096 sulfur amino acid metabolic process 1.82% (1/55) 6.33 0.012344 0.027937
GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides 1.82% (1/55) 6.33 0.012344 0.027937
GO:0042559 pteridine-containing compound biosynthetic process 1.82% (1/55) 6.33 0.012344 0.027937
GO:0005524 ATP binding 12.73% (7/55) 1.47 0.012605 0.028156
GO:0032559 adenyl ribonucleotide binding 12.73% (7/55) 1.46 0.012922 0.028495
GO:0030554 adenyl nucleotide binding 12.73% (7/55) 1.46 0.013164 0.02866
GO:0043168 anion binding 14.55% (8/55) 1.32 0.013937 0.029964
GO:0016053 organic acid biosynthetic process 3.64% (2/55) 3.45 0.014421 0.03025
GO:0046394 carboxylic acid biosynthetic process 3.64% (2/55) 3.45 0.014421 0.03025
GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor 1.82% (1/55) 6.01 0.015407 0.030459
GO:0042558 pteridine-containing compound metabolic process 1.82% (1/55) 6.01 0.015407 0.030459
GO:1901617 organic hydroxy compound biosynthetic process 1.82% (1/55) 6.01 0.015407 0.030459
GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors 1.82% (1/55) 6.01 0.015407 0.030459
GO:0046906 tetrapyrrole binding 3.64% (2/55) 3.43 0.014889 0.030855
GO:0006081 cellular aldehyde metabolic process 1.82% (1/55) 5.75 0.01846 0.035675
GO:0042398 cellular modified amino acid biosynthetic process 1.82% (1/55) 5.75 0.01846 0.035675
GO:0006520 cellular amino acid metabolic process 3.64% (2/55) 3.2 0.019919 0.038068
GO:0009066 aspartate family amino acid metabolic process 1.82% (1/55) 5.53 0.021504 0.039771
GO:0016763 transferase activity, transferring pentosyl groups 1.82% (1/55) 5.53 0.021504 0.039771
GO:0044272 sulfur compound biosynthetic process 1.82% (1/55) 5.53 0.021504 0.039771
GO:0035639 purine ribonucleoside triphosphate binding 12.73% (7/55) 1.29 0.023477 0.042958
GO:0032555 purine ribonucleotide binding 12.73% (7/55) 1.28 0.023971 0.0434
GO:0006575 cellular modified amino acid metabolic process 1.82% (1/55) 5.33 0.024539 0.043512
GO:0017076 purine nucleotide binding 12.73% (7/55) 1.28 0.024346 0.04362
GO:1901615 organic hydroxy compound metabolic process 1.82% (1/55) 5.16 0.027564 0.048378
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_132 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_154 0.034 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_117 0.035 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_178 0.02 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_2 0.022 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_89 0.019 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_173 0.025 Archaeplastida Compare
Zea mays HCCA Cluster_155 0.029 Archaeplastida Compare
Zea mays HCCA Cluster_191 0.037 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_13 0.023 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_115 0.024 Archaeplastida Compare
Picea abies HCCA Cluster_115 0.028 Archaeplastida Compare
Picea abies HCCA Cluster_198 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_75 0.042 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_94 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_154 0.034 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_164 0.031 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_185 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_266 0.029 Archaeplastida Compare
Vitis vinifera HCCA Cluster_138 0.033 Archaeplastida Compare
Vitis vinifera HCCA Cluster_244 0.02 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_55 0.033 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_56 0.019 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_66 0.021 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_115 0.019 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_145 0.019 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_156 0.02 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_163 0.02 Archaeplastida Compare
Sequences (55) (download table)

InterPro Domains

GO Terms

Family Terms