Coexpression cluster: Cluster_121 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003676 nucleic acid binding 18.18% (14/77) 2.35 0.0 0.000108
GO:0016570 histone modification 3.9% (3/77) 6.43 4e-06 0.000322
GO:0016569 covalent chromatin modification 3.9% (3/77) 6.43 4e-06 0.000322
GO:0005488 binding 35.06% (27/77) 1.16 2.3e-05 0.00127
GO:0016070 RNA metabolic process 9.09% (7/77) 2.94 3.5e-05 0.001567
GO:0006397 mRNA processing 3.9% (3/77) 5.35 5.1e-05 0.00163
GO:0044428 nuclear part 5.19% (4/77) 4.29 5.1e-05 0.001887
GO:0006325 chromatin organization 3.9% (3/77) 5.19 7.2e-05 0.00202
GO:0032774 RNA biosynthetic process 5.19% (4/77) 4.12 8.2e-05 0.002025
GO:0016071 mRNA metabolic process 3.9% (3/77) 4.91 0.000131 0.002916
GO:0090304 nucleic acid metabolic process 9.09% (7/77) 2.35 0.000449 0.009099
GO:1901363 heterocyclic compound binding 22.08% (17/77) 1.24 0.000626 0.010744
GO:0097159 organic cyclic compound binding 22.08% (17/77) 1.24 0.000626 0.010744
GO:0016043 cellular component organization 5.19% (4/77) 3.22 0.000904 0.014396
GO:0071840 cellular component organization or biogenesis 5.19% (4/77) 3.05 0.001383 0.020555
GO:0006352 DNA-templated transcription, initiation 2.6% (2/77) 5.04 0.001636 0.021458
GO:0005515 protein binding 12.99% (10/77) 1.6 0.001605 0.022369
GO:0009059 macromolecule biosynthetic process 6.49% (5/77) 2.5 0.001893 0.023454
GO:0044451 nucleoplasm part 2.6% (2/77) 4.76 0.002424 0.028452
GO:0003674 molecular_function 42.86% (33/77) 0.63 0.002823 0.031482
GO:0000347 THO complex 1.3% (1/77) 7.85 0.00434 0.032262
GO:0000350 generation of catalytic spliceosome for second transesterification step 1.3% (1/77) 7.85 0.00434 0.032262
GO:0000445 THO complex part of transcription export complex 1.3% (1/77) 7.85 0.00434 0.032262
GO:0004379 glycylpeptide N-tetradecanoyltransferase activity 1.3% (1/77) 7.85 0.00434 0.032262
GO:0098732 macromolecule deacylation 1.3% (1/77) 7.85 0.00434 0.032262
GO:0035601 protein deacylation 1.3% (1/77) 7.85 0.00434 0.032262
GO:0016575 histone deacetylation 1.3% (1/77) 7.85 0.00434 0.032262
GO:0019107 myristoyltransferase activity 1.3% (1/77) 7.85 0.00434 0.032262
GO:0006476 protein deacetylation 1.3% (1/77) 7.85 0.00434 0.032262
GO:1901360 organic cyclic compound metabolic process 10.39% (8/77) 1.68 0.003389 0.035993
GO:1990234 transferase complex 2.6% (2/77) 4.15 0.005649 0.040634
GO:1901362 organic cyclic compound biosynthetic process 6.49% (5/77) 2.07 0.00688 0.046489
GO:0006139 nucleobase-containing compound metabolic process 9.09% (7/77) 1.66 0.006752 0.047053
GO:0006368 transcription elongation from RNA polymerase II promoter 1.3% (1/77) 6.85 0.008662 0.049528
GO:0006354 DNA-templated transcription, elongation 1.3% (1/77) 6.85 0.008662 0.049528
GO:0006897 endocytosis 1.3% (1/77) 6.85 0.008662 0.049528
GO:0042393 histone binding 1.3% (1/77) 6.85 0.008662 0.049528
GO:0098657 import into cell 1.3% (1/77) 6.85 0.008662 0.049528
GO:0016593 Cdc73/Paf1 complex 1.3% (1/77) 6.85 0.008662 0.049528
GO:0006396 RNA processing 3.9% (3/77) 2.82 0.008899 0.049615
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_22 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_133 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_160 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_168 0.023 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_213 0.023 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_228 0.023 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_233 0.021 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_89 0.024 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_185 0.034 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_196 0.024 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_213 0.025 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_265 0.034 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_48 0.028 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_71 0.022 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_73 0.028 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_152 0.022 Archaeplastida Compare
Gingko biloba HCCA Cluster_20 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_131 0.02 Archaeplastida Compare
Gingko biloba HCCA Cluster_232 0.021 Archaeplastida Compare
Gingko biloba HCCA Cluster_324 0.028 Archaeplastida Compare
Gingko biloba HCCA Cluster_335 0.022 Archaeplastida Compare
Gingko biloba HCCA Cluster_338 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_1 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_70 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_103 0.032 Archaeplastida Compare
Zea mays HCCA Cluster_131 0.036 Archaeplastida Compare
Zea mays HCCA Cluster_132 0.034 Archaeplastida Compare
Zea mays HCCA Cluster_267 0.033 Archaeplastida Compare
Zea mays HCCA Cluster_279 0.024 Archaeplastida Compare
Zea mays HCCA Cluster_285 0.029 Archaeplastida Compare
Zea mays HCCA Cluster_322 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_345 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_346 0.02 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_22 0.02 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_61 0.032 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_121 0.022 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_128 0.025 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_159 0.025 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_163 0.025 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_95 0.025 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_102 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_235 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_247 0.029 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_259 0.043 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_293 0.025 Archaeplastida Compare
Picea abies HCCA Cluster_403 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_406 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_427 0.03 Archaeplastida Compare
Picea abies HCCA Cluster_473 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_503 0.028 Archaeplastida Compare
Picea abies HCCA Cluster_519 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_109 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_155 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_174 0.041 Archaeplastida Compare
Oryza sativa HCCA Cluster_296 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_325 0.024 Archaeplastida Compare
Oryza sativa HCCA Cluster_341 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_346 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_348 0.024 Archaeplastida Compare
Oryza sativa HCCA Cluster_350 0.034 Archaeplastida Compare
Oryza sativa HCCA Cluster_354 0.026 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_82 0.034 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_94 0.024 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_209 0.024 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_26 0.03 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_53 0.024 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_123 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_131 0.036 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_157 0.026 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_158 0.023 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_202 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_217 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_220 0.022 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_243 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_247 0.038 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_259 0.029 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_283 0.025 Archaeplastida Compare
Vitis vinifera HCCA Cluster_39 0.021 Archaeplastida Compare
Vitis vinifera HCCA Cluster_62 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_63 0.027 Archaeplastida Compare
Vitis vinifera HCCA Cluster_121 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_142 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_236 0.036 Archaeplastida Compare
Vitis vinifera HCCA Cluster_239 0.024 Archaeplastida Compare
Vitis vinifera HCCA Cluster_246 0.022 Archaeplastida Compare
Sequences (77) (download table)

InterPro Domains

GO Terms

Family Terms