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  3. GO:0003700

GO:0003700: DNA-binding transcription factor activity (Molecular function)

"A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons." [GOC:txnOH-2018]


There are 20425 sequences with this label.

Enriched clusters
Name Species % in cluster p-value corrected p-value action
Cluster_171 Arabidopsis thaliana 16.67 % 0.00297 0.046921
Cluster_36 Arabidopsis thaliana 32.74 % 0.0 0.0
Cluster_87 Arabidopsis thaliana 23.38 % 1e-06 0.0001
Cluster_27 Arabidopsis thaliana 13.94 % 0.000155 0.019464
Cluster_116 Arabidopsis thaliana 30.67 % 0.0 0.0
Cluster_215 Arabidopsis thaliana 15.49 % 0.003393 0.036457
Cluster_30 Arabidopsis thaliana 16.07 % 3e-06 0.003019
Cluster_70 Arabidopsis thaliana 16.92 % 0.00165 0.008589
Cluster_113 Arabidopsis thaliana 17.91 % 0.000612 0.034502
Cluster_196 Arabidopsis thaliana 23.21 % 2.2e-05 0.001141
Cluster_28 Arabidopsis thaliana 14.47 % 3e-06 0.000176
Cluster_148 Arabidopsis thaliana 17.28 % 0.000326 0.03016
Cluster_50 Arabidopsis thaliana 14.77 % 9.1e-05 0.038193
Cluster_92 Arabidopsis thaliana 21.88 % 2.2e-05 0.00089
Cluster_126 Arabidopsis thaliana 16.13 % 0.00044 0.002074
Cluster_141 Arabidopsis thaliana 16.42 % 0.002122 0.018212
Cluster_81 Arabidopsis thaliana 16.22 % 0.000115 0.001134
Cluster_37 Arabidopsis thaliana 17.24 % 0.002292 0.028818
Cluster_263 Arabidopsis thaliana 18.64 % 0.000719 0.035008
Cluster_190 Arabidopsis thaliana 18.34 % 0.0 1e-06
Cluster_13 Amborella trichopoda 5.45 % 2.3e-05 0.002488
Cluster_96 Amborella trichopoda 6.35 % 2.2e-05 0.000293
Cluster_241 Amborella trichopoda 12.2 % 0.0 1e-06
Cluster_163 Amborella trichopoda 6.41 % 0.000756 0.005494
Cluster_174 Gingko biloba 6.32 % 3.6e-05 0.000323
Cluster_87 Gingko biloba 3.19 % 9.6e-05 0.000903
Cluster_291 Gingko biloba 16.44 % 0.0 0.0
Cluster_325 Gingko biloba 4.55 % 0.008871 0.035647
Cluster_53 Gingko biloba 5.38 % 0.0 0.0
Cluster_41 Gingko biloba 3.54 % 0.00031 0.011209
Cluster_98 Gingko biloba 10.81 % 0.0 0.0
Cluster_80 Gingko biloba 7.61 % 2e-06 1.9e-05
Cluster_159 Gingko biloba 16.07 % 0.0 0.0
Cluster_60 Gingko biloba 7.69 % 0.0 1e-06
Cluster_93 Gingko biloba 4.9 % 0.000525 0.007442
Cluster_120 Gingko biloba 8.47 % 3.9e-05 0.000821
Cluster_540 Gingko biloba 33.33 % 0.019123 0.030422
Cluster_143 Gingko biloba 4.67 % 0.000653 0.010094
Cluster_336 Gingko biloba 4.84 % 0.00747 0.033854
Cluster_916 Zea mays 100.0 % 0.000144 0.003163
Cluster_194 Zea mays 6.67 % 4e-05 0.001087
Cluster_156 Zea mays 5.05 % 0.006938 0.029833
Cluster_353 Zea mays 10.42 % 0.000273 0.007376
Cluster_152 Zea mays 13.49 % 0.0 0.0
Cluster_366 Zea mays 12.5 % 2.3e-05 0.000144
Cluster_197 Zea mays 6.06 % 0.001269 0.021334
Cluster_355 Zea mays 4.63 % 0.009912 0.044605
Cluster_105 Zea mays 5.08 % 3.3e-05 0.000185
Cluster_22 Zea mays 5.0 % 9e-06 0.000137
Cluster_24 Zea mays 6.45 % 3e-06 6.5e-05
Cluster_230 Zea mays 19.05 % 0.0 0.0
Cluster_297 Zea mays 7.58 % 0.001195 0.033941
Cluster_54 Zea mays 5.56 % 3.1e-05 0.000293
Cluster_40 Zea mays 6.0 % 0.001336 0.03058
Cluster_198 Zea mays 9.26 % 0.000476 0.019979
Cluster_90 Zea mays 7.46 % 0.001279 0.009144
Cluster_273 Zea mays 13.89 % 0.0 2e-06
Cluster_253 Zea mays 6.17 % 0.00296 0.008816
Cluster_136 Marchantia polymorpha 4.05 % 0.002623 0.038558
Cluster_126 Marchantia polymorpha 6.38 % 0.000705 0.043458
Cluster_31 Marchantia polymorpha 8.06 % 3e-06 0.000301
Cluster_306 Physcomitrella patens 50.0 % 0.001909 0.024821
Cluster_97 Physcomitrella patens 4.82 % 1e-06 7.6e-05
Cluster_287 Picea abies 5.88 % 0.000988 0.042824
Cluster_33 Picea abies 4.85 % 0.0 5e-06
Cluster_397 Picea abies 11.94 % 0.0 2e-06
Cluster_369 Picea abies 5.19 % 0.001569 0.027406
Cluster_348 Picea abies 6.6 % 6e-06 0.000124
Cluster_23 Picea abies 11.43 % 0.0 0.0
Cluster_358 Picea abies 15.66 % 0.0 0.0
Cluster_664 Picea abies 33.33 % 0.019147 0.026457
Cluster_131 Picea abies 4.94 % 0.001891 0.021613
Cluster_240 Picea abies 4.88 % 0.001978 0.015201
Cluster_511 Picea abies 4.92 % 0.00719 0.033412
Cluster_211 Picea abies 5.0 % 0.006869 0.026226
Cluster_750 Picea abies 28.57 % 0.000846 0.011847
Cluster_175 Picea abies 4.59 % 0.000722 0.01753
Cluster_430 Picea abies 3.96 % 0.004199 0.010916
Cluster_1186 Picea abies 100.0 % 4.1e-05 0.00018
Cluster_284 Picea abies 4.92 % 0.000146 0.002744
Cluster_124 Picea abies 3.85 % 0.000191 0.001572
Cluster_36 Oryza sativa 7.81 % 0.000543 0.009316
Cluster_27 Oryza sativa 7.05 % 1e-06 3e-05
Cluster_311 Oryza sativa 15.38 % 0.0 1e-06
Cluster_53 Oryza sativa 5.0 % 0.00975 0.03343
Cluster_223 Oryza sativa 8.06 % 0.000469 0.001876
Cluster_255 Oryza sativa 4.24 % 0.001768 0.022702
Cluster_634 Oryza sativa 80.0 % 0.0 1e-06
Cluster_166 Oryza sativa 5.26 % 0.008168 0.049991
Cluster_97 Oryza sativa 4.63 % 9.7e-05 0.000586
Cluster_270 Oryza sativa 12.73 % 2e-06 3.4e-05
Cluster_163 Oryza sativa 8.62 % 0.000344 0.025084
Cluster_19 Oryza sativa 4.02 % 0.002386 0.010735
Cluster_332 Oryza sativa 5.47 % 9e-06 0.000158
Cluster_633 Oryza sativa 100.0 % 0.000108 0.001506
Cluster_190 Oryza sativa 5.45 % 0.001045 0.009403
Cluster_309 Oryza sativa 8.42 % 7e-06 0.001
Cluster_185 Oryza sativa 7.41 % 0.002406 0.01798
Cluster_43 Oryza sativa 4.07 % 0.002236 0.020785
Cluster_7 Oryza sativa 7.95 % 3.8e-05 0.000341
Cluster_109 Selaginella moellendorffii 3.12 % 8e-06 0.000406
Cluster_300 Solanum lycopersicum 100.0 % 0.000134 0.002949
Cluster_44 Solanum lycopersicum 8.66 % 0.0 0.0
Cluster_6 Solanum lycopersicum 7.53 % 0.000107 0.006281
Cluster_179 Solanum lycopersicum 7.94 % 0.000826 0.005859
Cluster_45 Solanum lycopersicum 4.55 % 0.000135 0.038776
Cluster_89 Solanum lycopersicum 10.45 % 1.3e-05 0.000867
Cluster_11 Solanum lycopersicum 3.32 % 0.007408 0.02791
Cluster_37 Solanum lycopersicum 5.59 % 0.000117 0.00335
Cluster_267 Solanum lycopersicum 8.51 % 0.002141 0.048163
Cluster_65 Solanum lycopersicum 6.67 % 0.000641 0.003642
Cluster_38 Solanum lycopersicum 4.76 % 0.000186 0.001631
Cluster_240 Solanum lycopersicum 10.61 % 1.2e-05 0.001892
Cluster_169 Vitis vinifera 9.9 % 0.0 6e-06
Cluster_28 Vitis vinifera 21.15 % 0.0 0.0
Cluster_98 Vitis vinifera 4.63 % 0.004544 0.044791
Cluster_177 Vitis vinifera 4.81 % 0.00387 0.02959
Cluster_227 Vitis vinifera 5.13 % 0.001138 0.014849
Cluster_188 Vitis vinifera 6.8 % 2e-06 3.1e-05
Cluster_240 Vitis vinifera 8.0 % 0.001537 0.018225
Cluster_175 Chlamydomonas reinhardtii 16.67 % 0.014123 0.044062
Cluster_72 Chlamydomonas reinhardtii 4.48 % 0.000532 0.003639
Sequences (20425) (download table)

Info: GO-associations disabled for items with more than 300 associated sequences !
InterPro and Family associations disabled for items with more than 5000 associated sequences !