Heatmap: Cluster_16 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
-2.08 -2.03 -2.33 -1.94 -1.63 -1.36 -1.52 -1.4 -0.94 -1.12 -0.96 -0.9 -2.0 -1.07 -1.33 -1.28 -1.45 -1.06 -0.81 -1.69 3.65 -1.1 1.62 0.27 -1.07 -0.77
-1.99 -2.29 -2.36 -2.01 -1.57 -1.52 -1.11 -1.27 -1.32 -1.52 -1.74 -2.02 -2.41 -1.07 -1.21 -1.18 -0.95 -0.01 -0.02 -0.68 3.43 1.26 0.96 0.25 -0.81 -0.47
-1.14 -1.79 -2.59 -2.16 -3.97 -6.16 -2.16 -2.78 -4.17 -2.72 -2.51 -2.08 -1.02 -0.8 -0.9 0.28 -1.46 0.17 -0.69 -1.62 3.14 1.46 1.99 0.1 -0.1 0.02
-3.18 -3.52 -3.16 -3.07 -2.67 -2.83 -2.91 -2.74 -2.74 -2.63 -2.61 -2.55 -3.06 -1.29 -1.21 -1.41 -1.89 -0.84 -0.51 -2.1 3.83 0.86 1.48 0.52 -1.29 -0.81
-1.16 -4.62 -2.08 -4.24 -2.71 -2.95 -2.47 -2.5 -2.09 -2.7 -2.23 -4.11 - -2.51 -2.86 - -3.97 - -2.75 -3.42 3.67 -1.76 2.4 1.84 -0.45 -0.53
-1.48 -1.42 -1.33 -0.72 -0.64 -1.02 -0.9 -0.85 -0.71 -0.5 -0.39 -0.52 -1.22 -0.36 0.15 -0.13 -0.48 0.25 -0.17 -0.97 2.54 0.93 0.56 0.68 -0.04 -0.06
- - - - - - - - - - 2.01 - - - - - - - - - 4.46 - - - - -
- - - - - - -1.0 -2.45 - - - -2.25 - -2.92 - - - - - - 4.2 0.78 1.75 -0.15 -1.41 -1.88
0.59 -0.49 -1.11 -1.43 -1.86 -1.86 -1.19 -0.94 -0.95 -0.52 0.2 0.72 0.55 -0.61 -1.47 -0.44 -0.9 -1.33 -1.77 -1.41 2.39 -0.31 1.39 1.02 -0.03 -0.1
-3.03 -2.24 -1.47 -0.52 -0.39 -0.37 -1.14 -1.29 -2.12 -1.87 -1.61 -1.42 -2.43 -0.44 -1.22 -0.51 -1.3 -0.74 -1.66 -1.19 3.48 -0.57 1.53 0.64 -1.17 -1.1
-0.45 -1.52 -2.74 -2.34 -1.95 -2.73 -2.09 -1.14 -2.04 -2.84 -0.7 -1.81 -1.53 -0.77 0.12 -0.57 -3.21 0.59 0.71 -1.46 3.22 -0.84 0.91 0.99 -0.55 0.57
-5.86 -2.87 0.24 -0.72 -2.34 -2.97 -2.78 -2.21 -0.75 - -5.59 -3.87 - - -4.64 - -4.58 -4.26 -3.01 - 4.09 -2.34 0.99 -0.01 -0.2 0.47
0.24 -1.33 -1.99 -2.44 -3.45 -4.15 -2.51 -1.55 -1.15 -0.46 0.47 1.29 0.41 0.39 -2.73 0.25 -0.63 -2.22 -2.67 -1.56 2.94 -0.44 0.63 0.2 -0.01 -0.21
-3.07 -2.37 -1.87 -1.19 -0.95 -1.56 -1.05 -1.1 -0.24 -0.01 0.3 0.17 -2.86 -0.7 -1.41 -0.76 -1.8 -1.2 -1.26 -2.05 3.23 -0.11 1.02 0.73 -0.28 0.09
-0.02 -0.99 -1.08 -1.77 -2.99 -3.51 -2.56 -1.22 -1.33 -0.2 0.39 0.92 0.4 -1.49 -1.49 -1.42 -1.82 -0.65 -1.51 -1.75 2.78 1.17 0.97 0.96 -0.5 -0.38
-2.85 -4.27 -2.8 -1.96 -1.3 -0.58 -0.27 -0.77 -0.91 -0.51 -1.0 -1.44 -4.4 -0.05 -1.64 -0.16 -1.88 -1.06 -0.91 -1.06 3.56 -1.38 1.11 0.12 -0.48 -0.52
-2.79 -2.55 -2.5 -1.63 -0.43 -0.75 -0.04 -0.32 -0.62 -0.03 -0.23 -0.76 -2.69 0.12 -1.07 0.37 -1.74 -0.77 -0.6 -1.01 3.32 -1.66 1.17 -0.44 -1.97 -1.3
-2.63 -3.37 -4.14 -2.37 -0.8 -0.57 -0.37 -0.61 -0.41 -0.74 -0.66 -1.79 -2.16 -0.26 -2.0 -0.53 -2.79 -1.06 -1.17 -1.72 3.46 -2.17 1.31 1.09 -0.94 -0.28
- - - - - - - - - - - - - - - - - - - - 4.7 - - - - -
-2.64 -2.79 -3.0 -1.99 -1.96 -2.22 -2.22 -1.77 -1.58 -1.8 -1.59 -1.92 -3.02 -2.34 -1.82 -2.46 -3.0 -2.01 -2.02 -3.34 3.85 -0.21 2.16 -0.18 -1.01 -1.0
-0.33 -0.46 -2.26 -0.48 0.3 0.53 -0.43 -0.41 -0.11 0.65 -0.49 -0.85 -0.39 - -2.35 -3.28 -3.06 -1.53 -0.46 - 3.6 - - -0.04 -3.88 -2.23
-3.04 - -2.62 -2.66 -1.56 -1.63 -3.29 -3.53 -1.65 -0.82 -0.81 -3.63 - -1.52 -1.57 - -3.54 -1.53 -0.66 - 4.26 -1.67 0.55 -1.84 -2.35 -
-3.03 -3.14 -3.72 -3.64 - -1.7 -1.56 - -2.71 -2.22 -1.77 -1.3 -1.89 -0.96 -1.58 -1.1 -1.62 -0.72 0.37 -2.95 4.04 -1.71 -0.83 -0.57 -0.29 0.17
-4.14 -4.86 -7.64 -6.68 -5.42 -6.68 -6.35 -6.5 -5.76 -5.38 -4.72 -4.14 -4.99 -3.49 -2.91 -3.35 -4.28 -3.07 -3.02 -2.65 4.06 -2.48 2.3 1.15 -1.27 -1.2
-4.06 -6.41 -4.83 -4.18 -5.81 -7.82 -4.97 -5.59 -4.83 -4.9 -3.95 -4.28 -4.68 -0.6 -0.78 -0.9 -0.96 -1.04 -0.71 0.01 3.65 -0.9 1.24 1.02 0.8 0.92
-3.67 -6.53 -7.11 -5.45 -5.64 -7.1 -5.78 -5.19 -5.54 -4.35 -5.55 -4.69 - -0.78 -1.09 -0.68 -1.62 -0.65 -1.1 0.17 3.68 -0.64 1.37 1.03 0.46 0.96
-0.56 -1.8 -2.56 -2.31 -2.83 -2.15 -1.99 -1.57 -1.94 -1.78 -1.99 -1.93 -0.74 -0.35 0.09 -0.63 -0.8 -0.66 -0.53 -1.06 3.53 0.07 0.47 -0.5 0.43 0.12
0.04 -0.74 -1.18 -1.08 -1.2 -1.16 -0.51 -0.31 -0.81 -0.8 -0.96 -0.85 -0.05 -0.32 -0.62 -1.05 -1.0 -0.06 -0.14 -0.93 2.94 0.22 -0.11 -0.27 0.19 0.39
-2.36 -1.3 -0.9 0.06 0.5 0.94 -0.11 -0.46 -0.39 -0.86 -1.44 -1.66 -2.21 -0.48 -0.44 -0.18 -0.64 0.33 0.65 -0.11 2.43 -0.6 0.28 0.14 -0.59 -0.26
- - - - - - - - - - - - - - - - - - - 3.31 4.01 - - - - -
-2.01 -1.42 -1.49 -1.07 -1.11 -1.16 -1.13 -0.98 -0.82 -0.84 -0.86 -0.81 -2.08 -0.32 -0.7 -0.74 -0.92 0.16 -0.35 -1.25 2.95 0.23 0.97 0.75 0.43 0.54
0.82 -0.22 -0.72 -0.43 -1.03 -2.21 -1.54 -1.33 -1.21 -1.08 -0.65 -0.06 0.79 -0.24 -1.21 -0.68 -1.69 -1.51 -1.63 -1.49 3.27 -0.84 -0.14 -0.1 -0.92 -0.91
- - - - - - -1.34 - - - - - - -1.2 - 0.02 - - - -1.93 4.27 - -1.21 2.05 - -
- -0.91 -0.09 -2.59 - - -2.46 - - - - - -2.27 -1.83 - - - -2.34 - - 4.04 -0.74 1.71 - 0.0 1.1
-2.45 -2.69 -4.05 -3.45 -4.45 -3.64 -3.53 -3.1 -3.83 -3.19 -2.72 -2.17 -2.82 -2.05 -2.16 -2.28 -3.58 -1.63 -2.13 -3.82 3.96 1.4 1.12 0.34 0.02 -1.0
-0.57 -0.06 -1.11 -1.35 -0.52 -1.06 -1.6 -1.96 -0.75 -1.72 -1.41 -0.05 -0.42 -1.74 -0.65 0.19 -2.16 0.57 0.34 -2.32 2.78 -0.7 0.89 0.06 0.83 0.45
- - - - - - - - - - - - - - - - - - - - 4.7 - - - - -
0.06 -3.46 - -1.59 -1.28 -1.74 -1.05 -1.2 -1.19 -0.93 -1.67 -1.11 0.02 -2.68 -1.94 -3.15 -4.43 -1.23 -2.1 -2.4 3.5 0.4 1.47 1.26 -1.13 -1.2
-1.65 -2.1 -2.4 -1.52 -0.98 -0.86 -0.85 -1.07 -0.28 -0.39 -0.13 -0.38 -1.78 -0.63 -1.14 -1.28 -1.33 -0.53 -0.68 -1.18 2.9 0.15 0.98 1.28 0.47 0.27
-2.97 -4.38 -3.86 -3.97 -2.7 -3.49 -3.24 -3.46 -2.62 -2.42 -2.57 -2.25 -3.25 -0.44 -1.1 -1.84 -1.83 -1.76 -1.65 -2.57 3.92 0.46 0.27 1.12 -0.09 0.04
- - - - - - - - - - - -1.31 - - - -1.26 - - - -0.2 4.12 - -1.78 2.62 -1.08 -
-0.87 -1.34 -1.53 -0.88 -1.15 -1.73 -1.5 -1.49 -1.43 -2.09 -1.84 -1.84 -1.24 -0.53 -0.75 -0.69 -1.27 0.09 0.07 -1.51 3.0 0.15 1.33 0.47 1.17 0.08
-1.1 -2.07 -1.47 -0.76 -0.76 -0.76 -0.71 -1.12 -0.61 -0.17 0.02 0.08 -1.16 -0.16 -0.36 -0.01 -2.56 -0.71 -1.02 -1.81 2.92 -0.58 0.58 0.92 -0.56 0.56
-2.56 -2.02 -3.52 -1.55 -1.82 -3.04 -3.3 -1.67 -1.93 -1.35 -0.35 -0.98 -4.93 0.11 -0.24 0.56 -1.72 -1.25 -0.77 -2.23 3.48 -2.11 1.27 1.0 -0.25 -0.28
-5.36 -5.55 -5.55 -5.58 -5.57 -5.98 -5.58 -5.57 -5.83 -5.19 -5.07 -4.67 -4.78 0.83 0.2 0.24 -0.54 -0.77 -1.1 -1.47 3.54 0.82 0.14 1.17 0.46 0.47
-1.18 -0.72 -0.27 -0.03 -0.12 -0.26 0.01 -0.16 -0.04 -0.15 -0.34 -0.32 -1.1 0.08 0.17 0.45 -0.21 0.08 0.0 0.16 1.98 -1.2 -0.01 -0.23 -0.13 -0.23
- - - - - - - - - - - - - - - - - - - - 4.7 - - - - -
- - - - - - - - - - - - 2.37 - - - - - 1.97 - 4.08 - - - - -
-1.71 -1.56 - - -1.8 - - -1.49 0.64 -0.75 -0.15 -1.61 - -0.86 - -0.81 -0.5 -1.85 - -0.49 3.93 0.29 -0.49 -1.1 -1.31 -1.2
-3.26 -2.79 -5.22 -5.14 -2.99 -4.2 -3.81 -5.05 -4.62 -3.11 -4.22 -7.12 -6.05 -2.29 -2.1 -2.64 -3.07 -0.18 -0.75 -2.72 4.28 -3.06 0.81 -0.96 -0.97 -0.99
-1.45 -1.07 -1.45 -1.68 -2.07 -1.65 -1.13 -1.08 -0.99 -0.81 -1.15 -1.36 -2.0 -2.57 -1.85 -3.08 -2.25 -0.87 -1.1 -1.91 3.77 -1.23 1.07 -0.37 0.0 -0.28
-0.76 -1.11 -1.63 -1.58 -1.22 -1.15 -1.22 -1.18 -0.79 -0.7 -0.33 -0.11 -0.42 -1.33 -1.74 -1.54 -1.4 -0.68 -1.09 -1.37 3.08 -0.19 1.41 0.91 0.35 -0.24
-3.53 -1.77 -2.49 -0.48 -0.67 -0.58 -0.83 -0.92 -0.4 -1.32 -1.27 -0.67 -2.38 -1.38 -2.32 -2.55 -2.51 -1.32 -1.38 -2.25 3.65 0.15 0.79 -0.0 -0.07 -0.57
-1.75 - -1.36 - - -0.44 - -3.14 -0.41 -2.11 -3.02 -2.94 - -3.62 -3.12 -3.14 -2.06 -0.86 -0.94 - 4.2 -2.28 -0.88 -0.15 -0.35 -0.25
-2.14 -2.37 -3.08 -2.91 -2.16 -1.62 -2.17 -2.45 -2.03 -1.45 -1.12 -0.77 -2.17 -1.39 0.2 -0.57 -1.44 0.05 -0.03 -0.68 3.32 0.01 1.3 0.76 -0.01 0.15
-2.14 -2.01 -2.12 -2.19 -2.34 -2.32 -1.85 -3.14 -2.35 -1.68 -2.26 -1.96 -1.89 -1.15 -1.77 -1.9 -2.07 -0.61 -0.51 -1.61 3.56 1.31 1.68 0.18 -0.34 -0.56
-2.56 - - - - - -1.81 - - -2.37 - - - -0.87 0.16 0.32 -0.54 -0.56 -0.04 -0.53 3.63 -0.27 0.92 1.07 -0.1 0.38
- - - - - - -0.55 - - - - -0.91 - - -1.26 - 0.2 -0.11 -1.08 - 3.93 -0.4 1.35 -0.11 0.32 0.08
- - - - - - - - - - - - - - - - 2.33 - - - 4.39 - - - - -
-0.84 -0.64 -0.69 -0.38 0.02 0.21 -0.05 -0.39 -0.79 -1.02 -1.18 -1.06 -1.57 -0.58 -0.86 -0.57 -0.52 -0.02 -0.11 -0.34 2.33 0.29 1.31 0.45 -0.27 -0.07
-2.22 -1.36 -1.39 -1.2 -1.37 -1.78 -2.01 -2.25 -1.78 -1.53 -1.37 -1.32 -1.92 -0.79 0.42 -0.37 -1.09 0.09 -0.27 -1.44 3.1 -0.44 1.85 1.11 -0.72 -0.56
-0.81 -0.96 -0.65 -0.55 -2.25 -1.67 -0.93 -0.91 -1.08 -0.57 -0.14 -0.23 -0.81 -0.88 -2.17 -1.16 -1.61 -0.82 -2.03 -1.76 3.09 -0.37 1.87 -0.45 0.4 -0.18
-4.09 -2.41 -2.01 -2.19 -2.6 -2.92 -3.06 -3.02 -3.23 -2.66 -2.11 -1.64 -4.44 -3.14 -2.98 -2.52 -2.34 -2.27 -2.34 -1.58 3.6 -0.12 2.48 1.34 -0.61 -0.48
-0.1 -0.82 -0.51 -0.82 -0.76 -0.92 -0.13 -0.77 -1.1 -0.84 -1.0 -0.41 -0.73 -1.09 -0.45 -0.96 -1.71 0.16 -0.27 -0.86 2.68 0.93 0.64 0.16 -0.02 0.32
-1.79 -1.47 -1.2 -0.44 0.33 0.73 0.77 0.36 -0.08 -0.93 -1.02 -1.68 -1.81 -1.72 -1.46 -0.78 -1.16 -0.36 -0.21 -0.46 2.25 -0.08 1.61 0.28 0.05 -0.63
-1.11 -1.24 -1.49 -1.58 -1.25 -0.75 -1.24 -1.35 -0.82 -0.51 -0.4 -0.35 -1.43 -0.49 -0.71 -0.62 -0.76 0.1 -0.26 -1.02 2.64 0.34 1.31 1.49 -0.26 -0.3
-0.71 -1.35 -1.22 -1.1 -1.05 -0.87 -1.05 -1.03 -0.92 -0.75 -0.46 -0.26 -0.6 0.31 0.07 0.39 -0.41 -0.58 -0.67 -0.86 2.56 -0.52 1.49 0.42 -0.15 -0.14
-2.92 -1.99 -1.79 -0.76 -0.84 -1.02 -0.55 -0.71 -0.92 -1.24 -0.7 -1.26 -3.68 -1.03 -1.31 -1.11 -1.23 -0.65 -0.5 -1.83 3.04 0.42 1.81 0.66 0.27 0.09
-1.92 -2.19 -2.16 -1.62 -1.56 -2.25 -1.44 -1.24 -1.01 -1.12 -0.75 -1.1 -2.05 -0.52 -1.7 -1.26 -1.87 -0.67 -1.38 -1.92 3.19 0.77 1.38 0.78 0.79 0.62
0.22 -1.09 -1.91 -1.83 -3.6 -3.48 -0.15 -1.54 -0.66 -0.58 -1.21 -0.59 -1.81 -1.81 -3.75 -2.43 -2.4 -1.01 -0.44 -2.18 3.77 -2.82 0.23 -1.38 0.49 -0.43
-6.94 -7.76 -6.11 -5.44 -4.1 -2.84 -2.04 -3.1 -0.63 -0.88 -1.4 -2.23 -7.65 -1.37 -1.2 -2.08 -1.95 -1.83 -2.39 -2.22 3.64 -1.69 2.12 1.68 -1.33 -0.27
-5.68 -8.2 -8.45 -7.88 -7.36 -6.84 -6.59 -7.21 -3.44 -3.37 -2.9 -2.99 -6.91 -4.03 -3.92 -4.86 -5.01 -5.45 -5.6 -5.58 4.07 -1.47 1.83 2.02 -2.6 -2.14
0.6 -0.94 -1.04 -1.09 -2.44 -2.75 -1.16 -0.15 -1.13 -1.07 -0.91 -1.07 -0.07 -0.24 -2.48 -2.45 -2.08 -1.05 -1.29 -1.4 3.09 -1.62 1.87 0.65 -0.2 -0.38
-0.47 -0.8 -0.26 -0.14 -0.47 -0.72 -0.26 0.06 -0.4 -0.29 -0.25 -0.47 -0.23 -0.91 -1.77 -1.18 -3.21 -1.91 -1.85 -1.45 3.15 -1.78 -0.68 -1.89 0.44 1.05
-1.54 -1.51 -1.4 -1.14 -0.79 -0.89 -0.8 -0.99 -0.91 -0.81 -0.75 -0.96 -1.9 -0.1 -0.6 -0.69 -0.53 -0.11 0.03 -0.63 2.81 0.46 0.7 0.54 0.41 0.56
-2.8 -2.85 -2.7 -1.76 -1.32 -1.71 -1.04 -0.86 -0.88 -0.91 -1.11 -1.42 -2.94 -0.87 -1.78 -1.17 -1.47 -0.53 -0.71 -1.73 3.67 -0.42 0.56 -0.56 0.35 0.45
-3.68 -3.24 -1.7 -2.86 -2.39 -2.06 -1.06 -0.95 -0.01 -1.89 -0.54 -2.72 -1.97 -0.29 -0.55 -1.6 -1.58 0.95 -0.55 -1.55 3.33 0.62 0.56 0.03 0.13 0.35
-5.31 - -4.44 -2.36 -2.71 -3.37 -0.82 -2.11 -1.46 -0.25 -1.57 -2.02 -2.68 -2.98 -2.53 -1.34 -1.91 -2.27 -1.34 -3.5 4.05 -3.8 1.77 -0.32 -3.79 -2.16
-0.79 -2.34 -2.22 -1.57 -1.5 -1.17 -1.12 -1.26 -1.11 -0.8 -0.37 -0.3 -0.81 -0.72 -3.0 -0.68 -4.07 -3.89 -5.37 -2.63 3.04 -0.46 2.0 1.01 0.82 0.51
-2.67 -2.42 -2.18 -1.45 -1.49 -1.48 -1.31 -1.21 -1.23 -1.5 -1.09 -1.6 -2.64 -1.52 -2.55 -1.19 -3.08 -1.87 -2.76 -3.09 3.84 0.65 1.57 -0.5 -1.6 -1.77
- - -0.22 -0.64 - -0.97 - -2.33 -2.23 -2.27 - - -1.03 0.41 -0.83 - -2.25 0.4 0.18 -1.54 3.6 -1.62 1.53 0.74 -1.09 -1.08
-1.06 -1.23 -0.95 -0.95 -0.74 -0.59 -0.71 -0.96 -0.79 -0.72 -0.55 -0.41 -0.96 -0.11 -0.02 0.17 -0.11 -0.08 -0.15 -0.44 2.33 0.47 0.94 0.86 -0.13 -0.13
-3.44 -1.43 -0.92 -1.78 -1.12 0.11 -0.23 -1.12 -0.1 -2.35 -2.3 -2.36 -4.87 -3.03 -0.92 -1.07 -0.73 -1.03 -0.39 -1.39 3.54 -2.01 1.11 -3.15 1.23 -1.1
0.35 -0.33 -0.68 -0.6 -0.88 -0.81 -0.71 -0.5 -0.85 -0.73 -0.4 0.02 0.29 0.1 -0.67 0.07 -0.12 0.0 -0.4 -0.56 2.19 0.22 0.11 -0.47 0.53 -0.01
- -5.37 -5.61 -5.53 -4.19 -5.6 -4.28 - -5.63 - -3.65 - -4.22 -0.13 -0.24 -1.49 -1.07 -0.68 -0.58 -1.53 3.55 0.27 1.37 1.39 0.72 0.75
-1.85 -2.65 -2.9 -2.07 -1.95 -2.69 -1.79 -1.49 -0.85 -0.81 -0.51 -0.68 -2.43 -0.43 -1.11 -1.1 -1.33 -1.11 -1.07 -1.75 3.22 1.07 1.22 0.94 0.46 0.21
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Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.