Heatmap: Cluster_309 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
-1.72 -2.51 -2.42 - -2.75 -2.4 -2.2 -2.63 -1.63 -0.7 -0.69 - - 2.15 0.62 0.26 1.0 0.9 -0.59 1.42 0.5 -1.58 1.86 -0.75 0.81 -0.05
-0.56 -1.96 -1.61 -1.22 -1.65 - -0.51 -2.63 -1.27 -1.89 -2.91 -1.16 -2.41 0.68 0.77 1.7 0.8 0.84 1.47 1.24 -1.02 -0.39 0.86 -0.01 0.7 -0.37

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.