Heatmap: Cluster_316 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
-0.17 0.07 -0.3 -0.02 -0.07 0.31 0.66 -0.4 -0.95 -2.68 -2.23 -1.51 -1.1 -0.82 0.49 -0.53 -1.24 1.48 1.7 -0.84 0.36 0.54 -0.37 -2.01 0.4 0.33
- 0.97 -0.61 -0.54 1.63 0.34 -0.16 -0.73 -0.63 -0.66 0.96 0.48 - 0.03 - - - 1.73 2.39 - -0.02 - -1.28 - 0.32 -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.