Heatmap: Cluster_27 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule
Ovule, mature
Ovule, pollinated
Strobilus, female
Ovulate strobilus
Microstrobilus
Kernel
Leaf
Leaf, female
Leaf, male
Leaf, salicylic acid
Leaf, seedling
Leaf, truncation control
Leaf, truncation treatment
Leaf, water
Yellow-green stripe leaves
Green leaves
Stem
Cambium
Root
0.8 1.25 -0.42 0.44 0.86 -0.35 -0.89 -0.1 -0.78 -0.75 -1.21 -1.31 -0.9 -0.83 -0.5 -1.04 -0.8 0.6 1.31 -0.26
0.62 0.57 0.31 1.21 1.23 -1.2 -0.12 0.38 -1.27 -0.73 -1.37 -2.54 -2.31 -1.59 -1.65 -1.78 -2.6 0.04 2.02 -1.12
- - - - - - - 4.32 - - - - - - - - - - - -
0.94 - 3.02 - - - 1.34 0.15 - - 1.91 0.14 0.56 - - - - - - -
- - - - - - - 4.32 - - - - - - - - - - - -
- - - - - - -1.08 1.06 1.29 0.97 2.19 - 1.12 0.17 1.59 - - - 1.13 -
0.38 1.93 - - 1.3 - -0.41 1.91 -1.64 - - -1.86 - - 1.5 - - -0.41 1.66 -0.73
1.18 0.18 1.09 - -0.98 - -0.68 0.54 -0.02 -1.84 0.58 -1.13 -2.15 - 2.2 1.23 - - -0.94 -0.07
- - - - - - 1.11 0.15 0.04 - - - 1.39 - 1.51 2.43 1.85 - 0.32 -
- - - - - 3.5 - 3.12 - - - - - - - - - - - -
- - - - 3.05 - - 0.73 - - - -0.81 - - - - - - - 3.24
- - - - - - - 1.12 - - 4.16 - - - - - - - - -
-0.06 -2.7 -1.33 -0.58 -1.34 1.67 0.58 1.21 0.13 0.0 -1.75 0.94 0.47 0.17 -1.05 -2.26 0.19 -0.21 -0.29 -3.48
- - - - - - 0.59 0.22 -0.28 0.48 1.27 - -0.05 1.42 2.07 1.99 - - -0.18 -
- - - - - - - 2.45 - - - - - - - - - - 3.86 -
- - - - - - - 4.32 - - - - - - - - - - - -
-0.14 - - 2.52 - - - -0.81 - 0.01 - - 2.67 1.91 0.74 - - - - -
- - - - - - - -0.58 - - - - - - - 4.27 - - - -
- - - - - - -0.03 0.53 -0.91 -0.19 - - 2.48 2.23 0.48 2.17 - - - -
0.11 -2.33 -1.79 -0.73 -1.9 -1.57 -1.87 2.75 -2.45 -1.7 -1.19 -1.81 -1.48 -3.28 1.97 1.13 -0.08 0.11 -1.21 -
- - - - - - - 2.14 - 0.23 2.0 - 1.33 -0.42 0.82 - - - 2.43 -
- - - - - -0.48 - 1.16 - -0.32 2.42 0.66 -1.85 -1.57 1.73 - - - 2.39 -2.77
- - - - - - - -3.6 - - - - - - - 3.49 1.91 - 1.07 1.5
0.66 0.2 - 2.31 -1.39 - -1.24 1.89 -1.05 -0.77 -2.6 -4.5 - - -2.63 -0.93 -2.44 -1.74 2.42 -
1.0 0.13 -0.55 -0.92 0.03 -0.79 0.67 2.52 -1.42 -2.42 -0.36 -0.65 -1.74 -3.01 0.21 -0.34 - -2.67 0.88 -1.25
-2.59 -0.43 -0.48 - 1.18 -2.39 -0.3 0.22 0.61 0.73 0.66 -0.09 -0.29 -0.72 1.49 0.81 -0.37 0.44 - -2.89
-4.27 - - 0.77 0.65 0.13 -2.17 -0.57 -0.12 0.04 -1.5 -1.35 -0.36 -0.0 -0.63 -0.54 0.36 0.44 2.18 0.78
- - - - - - - 0.42 - - - - - 1.23 - - 3.23 - 2.8 -
- - -0.48 1.23 1.94 - -1.18 -0.27 -2.02 0.3 0.46 -2.33 1.04 -0.37 0.33 1.4 0.02 - 0.08 -
- - - 4.0 0.42 - -0.57 -0.82 -3.12 -4.43 -0.44 -1.08 - - - - - - -17.9 -
- - - - - - - 4.32 - - - - - - - - - - - -
0.21 - - 1.84 0.3 - - 0.66 0.5 -0.67 0.1 - - - - 2.65 0.25 - 0.91 -
- - - - - - - 1.34 - - - 3.02 - - - - - - 3.23 -
- - - - - - - -1.13 - 3.15 - - - - - - 3.42 - - -
-1.91 - - 0.42 -0.56 -1.74 -0.12 1.11 -3.06 -2.84 -2.69 -0.64 -0.33 0.38 -2.07 -1.73 0.15 0.68 2.85 -0.49
- 1.99 - - - 1.07 -0.85 -1.92 -0.78 - - - -0.51 - - 3.29 - - 1.02 -
0.84 - - 1.21 -0.34 -0.3 -1.11 -0.36 -1.97 - - - 0.38 -0.39 1.42 2.71 - -0.54 -0.3 -
- - -1.12 1.59 - - - -1.5 -0.13 -0.32 0.84 - 1.37 0.88 -1.34 2.04 -1.0 -1.3 0.7 0.25
- - - - - - - 2.17 3.43 - -0.15 1.07 - - 0.77 - - - - -
2.27 - - - - - - 1.91 0.36 - - - 1.08 - 2.17 - - - 1.82 -
- - 0.19 - 1.74 - - -0.9 -0.14 0.21 - -1.93 - - 1.4 2.32 - 1.99 0.06 -
-0.88 - - - 0.69 - - 0.86 1.14 1.09 - - 1.99 1.97 -1.12 0.81 - - -0.46 -0.19
- - - - - - - 4.32 - - - - - - - - - - - -
-1.59 0.55 - - - - -0.79 0.84 1.33 0.92 0.63 -0.76 -0.32 1.67 0.8 -0.1 -1.11 1.12 - -
-2.39 - - - -3.39 1.37 - 1.48 1.94 2.62 -1.18 -0.43 -0.63 0.88 -2.11 - -2.81 -2.03 - -3.74
- - 1.49 - - - - -1.31 - 0.68 1.45 - - - 1.27 3.19 - - -0.12 -
- - - - - - - 4.32 - - - - - - - - - - - -
-3.44 - - - - - -3.16 1.62 2.13 1.74 0.2 1.35 - -3.01 0.76 0.74 0.72 - -2.53 -
-3.21 - - - - - - 1.97 1.62 1.76 0.29 0.83 -0.09 0.61 0.19 0.62 0.16 - -2.21 -
- - - - - - - 4.32 - - - - - - - - - - - -
- - - - - - -1.23 0.49 1.14 0.41 0.97 -1.9 1.65 1.88 0.83 0.93 0.94 - - -
0.58 0.53 -1.64 2.07 0.47 - 0.83 -0.92 0.31 - -1.68 -3.59 1.83 0.8 - -1.35 -1.52 -0.22 -1.54 -
-0.83 - - - -0.77 - -1.71 0.69 -0.52 0.64 1.67 - 2.33 1.69 -0.94 -0.57 -0.75 - -0.02 -1.12
-0.62 -0.19 -3.53 -0.75 -0.48 -3.48 -2.39 -0.11 1.63 1.05 1.14 -3.27 0.98 1.02 1.05 -0.02 -2.36 -2.27 -0.6 -1.77
- - - - - - - 4.32 - - - - - - - - - - - -
-0.0 - - 1.64 - 0.27 -0.75 0.34 -0.73 -0.32 0.89 - - -0.98 0.33 1.96 0.63 -0.25 0.6 -
-2.96 - - - -0.61 - 1.45 -6.29 - - - - - - - - - - 3.48 2.41
0.17 - - 1.86 0.16 - - 1.03 - -0.7 - -1.79 - -0.24 1.61 0.45 1.99 - 0.95 -
- - - - - - 4.02 1.5 -0.07 - - - - - - - - - - -
-0.27 -3.75 -4.91 1.61 0.01 -2.36 -0.23 0.88 0.07 -0.41 -1.26 -3.84 -0.7 -0.25 -1.09 -1.48 -3.21 -1.21 2.66 -0.54
- - - - - - - 0.4 - - - - - - - 4.22 - - - -
- - - - - - - 2.3 - - - - - - - 3.91 - - - -
-0.51 -1.28 -0.2 1.41 0.14 -1.95 -1.51 0.4 0.09 0.27 -1.62 -3.27 -1.43 -1.1 -1.12 -1.84 -2.52 -0.03 2.73 -1.91
-5.02 -6.2 -7.37 -3.34 -2.32 -1.98 -2.11 2.18 1.72 1.42 0.86 0.02 0.43 0.66 0.24 -1.41 0.03 -1.74 -7.42 -5.31
-5.47 - - - -5.81 - -2.39 1.59 1.37 1.07 -0.25 -0.24 1.87 2.08 -0.54 -0.66 -0.12 -2.12 -7.18 -5.25
-0.43 0.74 -1.92 - -1.76 -3.78 0.5 -1.16 -1.32 -0.93 0.07 -0.23 -1.07 -0.94 -0.15 -1.7 -0.54 -4.25 2.55 1.79
-2.53 0.01 -0.78 - 0.25 -2.82 2.79 1.64 -0.75 -0.51 -3.2 -1.85 -1.48 -1.99 - 0.35 -1.19 0.73 -1.85 -0.12
- - - - - - - 4.32 - - - - - - - - - - - -
-1.23 1.9 -0.12 - - - 0.62 0.08 1.02 0.94 1.69 0.46 - - - - - 1.56 -0.27 -
1.0 -0.19 0.08 - 0.04 -2.02 0.11 -0.31 0.74 1.31 0.42 -0.93 -0.9 -2.21 0.47 -0.2 0.17 -0.49 0.92 -2.61
-1.8 - -0.83 - -0.74 - - -1.34 1.44 1.96 0.73 -2.61 - - 1.31 2.33 0.87 - -1.31 -
-0.92 -1.16 -3.83 -3.2 -1.83 -0.1 0.32 0.62 1.28 1.39 -0.57 -1.26 -0.09 -0.3 0.21 -0.62 -0.09 -0.35 0.49 1.01
- - - - 1.23 - - -1.83 - - - - - - - - - - 4.12 -
- - - - - - - 4.32 - - - - - - - - - - - -
- - - - - - - 4.32 - - - - - - - - - - - -
1.23 - - 0.91 -0.83 - - -1.63 -0.9 -1.64 - - - - - - -0.72 - 3.75 -
- - - - - - - 4.32 - - - - - - - - - - - -
0.96 - - - - - 1.11 0.32 0.36 - - - 2.67 2.81 - - - - - -
-1.58 - 0.49 - 0.71 - 0.48 0.61 0.44 0.38 -0.09 -1.22 0.68 -0.24 0.81 0.08 0.98 -0.66 0.86 -
- - - - - - - 4.32 - - - - - - - - - - - -
1.54 1.73 2.09 -1.82 1.08 -2.25 -1.67 0.23 -2.71 -2.32 -2.54 - -3.33 - -1.14 -0.5 -0.23 0.18 0.33 -1.32
-0.95 0.59 - 0.72 0.62 -1.23 1.41 0.61 -0.03 -0.75 -0.02 0.69 0.75 0.03 0.27 -2.28 -0.07 -1.67 -1.12 -2.83
- - - - - - 1.13 2.91 -1.35 - 0.22 - -1.15 0.35 0.05 1.94 - - 1.09 -
- - - - - - - 4.32 - - - - - - - - - - - -
- - - - - - - - - - - - - - - 4.32 - - - -
-2.45 -1.03 -2.11 -2.87 -0.5 0.31 -1.45 0.32 0.79 -0.06 -0.29 0.2 1.16 1.17 0.35 -0.94 -0.63 0.91 0.3 -0.5
- - - 3.18 - 1.98 0.21 -0.16 0.64 - - - 0.58 - 0.93 - - - - -
0.03 - - 2.7 - - 0.14 -0.58 0.45 0.18 - - 0.83 2.1 - - 1.11 - - -
- - - - - - - 4.32 - - - - - - - - - - - -
-0.85 -0.51 -0.51 -0.45 -0.4 -4.28 -1.42 0.31 0.96 -0.1 0.79 -0.79 0.44 0.32 0.72 0.16 -0.42 -0.81 1.03 -0.08
- - - - - - - 1.57 - - - - 2.56 1.45 - - 3.07 - - -
-4.38 -1.04 -4.97 -0.29 -3.56 - - 2.08 1.95 1.7 -3.26 -0.13 -1.47 0.83 -1.93 0.19 1.33 -4.28 - -3.26
-6.82 -4.55 -6.41 -3.98 -5.97 -2.63 - 2.65 2.21 1.1 -1.69 -1.23 -2.31 -1.69 -2.28 0.68 1.83 -5.07 - -6.72
-0.81 1.32 0.3 1.86 - - - -1.11 - -0.59 0.13 - - - 0.07 2.94 - - 0.18 -
0.37 -0.87 0.12 - -1.76 -5.27 -1.81 1.8 1.69 0.22 -1.67 0.62 0.51 1.36 -3.19 0.9 -1.82 -1.42 -7.1 -3.56
1.66 - - - -2.26 -0.6 -1.85 -0.19 0.38 0.36 - -0.3 -1.98 -0.08 - 2.01 0.7 -1.27 2.05 -
- - 0.52 - - - 0.79 0.22 -16.22 0.98 - -0.18 0.35 0.08 - - -1.3 1.7 0.06 2.54
- - - - - - - -0.55 - - - - - - - 4.27 - - - -
1.01 - -0.21 1.86 - -1.64 -1.49 0.15 -0.75 -0.66 1.58 -2.8 -0.84 - 0.78 1.32 -0.52 -1.89 0.46 -2.1
-0.93 - - - - - -1.21 0.8 1.58 1.53 -1.6 -3.53 -0.93 -3.06 -0.76 1.67 -1.44 - 1.96 1.22
-0.42 - -0.07 - -1.07 1.85 0.24 0.1 0.84 0.94 1.18 -3.04 - -2.46 0.43 1.63 - -0.17 -1.51 -
- - - - - - - 4.32 - - - - - - - - - - - -
1.24 - - - 3.33 - - 0.4 0.48 - - - - 1.87 - - - - 0.26 -
- - -0.98 - - - 1.47 0.02 0.88 -0.72 0.55 -1.84 1.58 1.73 1.2 - - -0.15 -2.59 0.88
- - - 0.01 -0.08 - 1.56 0.25 0.96 0.97 0.54 -1.92 0.79 1.38 -0.83 -1.41 -0.58 -0.88 -0.4 0.07
-2.63 - - -0.03 0.36 - 0.51 0.1 1.34 1.29 0.53 - 0.6 0.61 -0.34 - - 1.16 -0.44 0.9
-1.76 - -2.71 - -0.74 -0.98 0.58 0.48 0.67 0.74 -0.58 -1.68 1.08 0.88 -0.73 -0.98 -0.74 -0.0 0.59 1.66
-1.16 - - 2.33 -0.35 - -1.79 0.2 -0.74 -1.43 -2.35 - -4.28 -3.36 -1.31 -3.63 -3.42 -0.13 3.19 -1.4
-21.81 - - - - - -20.97 0.65 - 1.25 1.69 0.7 1.09 -22.03 - - - - 3.18 -
- - - - - - - 4.32 - - - - - - - - - - - -
-6.83 - - - - - - 0.92 0.54 2.36 2.2 -0.95 2.09 0.48 -0.47 - - - - -
- - - - - - -2.91 4.14 - - 1.12 - - - - - - - - -
-0.4 - - 1.53 -1.03 - 0.38 1.41 -0.12 0.08 0.24 -4.13 -3.33 -1.66 0.23 - - -0.21 2.54 -1.25
-5.58 - - -3.06 - -3.47 -6.6 1.49 2.06 1.17 1.68 -2.42 1.58 0.98 0.9 - -3.99 -4.52 -6.84 -2.25
- - - - - - - 4.32 - - - - - - - - - - - -
3.74 - - - - - - 2.73 - - - - - - - - - - - -
1.53 - - - - - 1.57 1.33 - - - - - - - - 3.54 - - -
- - - - 2.78 2.98 - 1.47 - - - - - - - - - - 1.3 -
- - - - - - - -1.2 - - - - - - - 4.29 - - - -
- - -0.67 - - - 1.64 1.36 1.35 -0.61 1.96 0.11 0.43 0.29 -0.89 -0.52 - - 0.23 -0.9
1.19 - 1.11 - - - 1.93 1.13 0.22 - - - 1.42 0.61 0.89 - - - 1.24 -
- - -0.67 - - - - 1.8 -2.2 -1.4 1.31 -2.64 3.48 - 0.11 - - - -1.3 -
0.47 0.86 -4.39 -0.85 0.03 - 0.42 -0.22 -0.78 -0.22 -0.1 -3.59 -4.59 - -0.12 -1.85 -2.51 -2.76 3.1 -1.3
0.9 -2.02 -1.15 1.69 -1.11 -0.85 -0.23 -0.22 -0.76 -0.3 -1.66 -5.16 -1.95 -1.84 0.35 0.76 -0.78 0.14 1.73 0.32
-1.51 -2.07 -2.29 - -2.0 0.99 0.08 1.37 -1.22 -0.76 0.01 -1.37 1.7 2.58 -1.15 - -1.52 -2.47 - -0.53
- - - 2.95 - - - 0.45 0.61 - - - -0.14 - - 2.94 - - -0.37 -
- - - - - - - 1.12 2.48 - - - - - - - - - 3.61 -
1.84 - - - - - - 1.3 - - - - 1.41 - - 3.5 - - - -
0.96 - - 2.64 - - - -0.67 -0.1 - - -1.04 0.13 1.08 0.85 1.44 - - 1.03 -
-0.62 - -3.59 - -0.08 - -0.78 0.99 1.99 0.14 - - - - - 2.43 1.43 - - 1.38
-1.39 -1.43 -0.77 -1.89 -0.67 - 0.43 -0.25 0.88 0.6 0.6 -1.05 0.55 0.94 0.56 1.41 0.38 -1.67 -1.42 -0.51
1.37 - -0.02 1.69 - - -1.63 0.5 -0.7 - - - 0.77 -1.5 1.57 1.93 - - 0.66 -1.11
- - - - - - 2.14 1.86 0.6 - 3.2 - - - - - - - 0.28 -
-0.6 1.45 - - 1.45 - -0.41 0.33 - -0.52 0.27 0.08 -1.1 -0.17 0.21 2.45 - - -0.08 -
- - - - - - - 1.51 - - - 4.1 - - - - - - - -
- - - - - - - 0.94 - - - - - - - 3.7 - - 2.35 -
-1.03 - - - - 0.14 0.32 0.47 1.23 -0.87 0.84 -1.87 -1.4 -0.45 -0.25 2.22 - 1.4 -0.62 -0.15
0.9 - -0.69 0.87 -1.83 0.77 -0.19 -0.27 1.46 -0.65 0.69 -0.87 -3.0 -2.28 -0.01 0.87 -0.72 -1.0 0.77 -1.11
- - - - - - - - - - - - - - - 4.32 - - - -
2.07 -1.11 -0.64 1.16 -1.45 -3.53 -3.59 0.93 -0.45 -0.87 -1.12 -3.83 1.18 -0.18 -1.05 0.99 -0.44 -1.42 0.32 -2.16
-2.04 - - - - - - 1.02 1.1 0.42 -1.18 - 2.1 1.04 0.32 2.14 0.24 -1.12 -2.69 -
- 1.87 - - -0.63 - - 0.38 -0.24 - - 2.72 - - 1.28 - -0.08 0.75 -0.8 0.41
0.26 0.98 -0.62 - -0.67 - 1.52 -0.25 -0.06 -0.57 0.74 0.42 -3.11 -1.19 0.68 0.93 -1.65 0.13 -1.03 0.31
1.99 - - - - - - -0.35 1.56 1.87 1.66 - - - - - - - 2.46 -
- - - - - - - -0.82 - - 3.26 1.5 - 1.91 - - - - 1.7 -
0.97 0.73 0.64 1.27 -0.34 - - 0.16 -0.42 -1.25 - - 0.55 0.18 0.34 0.85 -0.32 - 1.52 -
2.31 - - - - - - 2.7 - - 3.1 - - - - - - - - -
- - - - - - - 1.55 - - - - - 4.09 - - - - - -
- - - - - - 1.25 0.33 - 0.09 - -1.07 - - - 1.2 1.4 - 1.02 2.97
- - - 2.54 - - - 0.72 0.23 0.09 - - 1.81 0.68 1.7 - 0.95 - - -
1.51 1.29 -1.21 -0.12 1.25 -0.69 -0.94 0.04 -0.58 -0.88 -13.29 -2.29 -2.31 -2.09 -0.78 -0.98 - 1.08 1.57 -0.32
1.74 - - - - - - 1.01 - - 0.78 - - 0.02 2.92 2.12 - - - -
- - - - - - 1.56 1.18 1.65 2.63 - - - 0.02 1.33 - - - 0.97 -
- - - - - - - 4.32 - - - - - - - - - - - -
- - - - - - - 1.12 1.53 - - - - - - 3.51 - - 1.81 -
- - - - - - - 4.32 - - - - - - - - - - - -
2.84 - - - - - - 1.37 - - - - 2.49 - - - - - 2.22 -
- - - - - - - 4.32 - - - - - - - - - - - -
- - - - - - 3.09 0.37 - - - - - 2.33 - - - - 2.38 -
-0.31 - - - - - -3.01 0.44 0.79 -0.15 -0.21 -3.03 2.03 1.6 -0.31 1.07 1.58 -2.34 -0.55 -2.24
- - - - - - - - - - - - - - - 4.32 - - - -
- - - - - - - -0.56 0.02 0.91 - - - - - 3.41 - 2.53 - -
- - - - - - - 1.92 - - - - - 4.02 - - - - - -
- - - - - - - 4.32 - - - - - - - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.