Heatmap: Cluster_280 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule
Ovule, mature
Ovule, pollinated
Strobilus, female
Ovulate strobilus
Microstrobilus
Kernel
Leaf
Leaf, female
Leaf, male
Leaf, salicylic acid
Leaf, seedling
Leaf, truncation control
Leaf, truncation treatment
Leaf, water
Yellow-green stripe leaves
Green leaves
Stem
Cambium
Root
-3.83 -4.7 -3.34 -4.16 -5.12 -2.09 4.24 -5.08 -5.53 -4.43 -5.63 -4.0 -5.91 -6.93 -5.66 -4.49 -5.75 -3.57 -5.16 -3.15
-2.25 - - - - - 4.14 -3.85 - -2.1 - -2.26 -0.94 -2.68 - - - - 0.02 -
-7.34 - -6.22 - - 0.14 4.13 -5.16 -6.35 - -3.83 -7.33 -7.62 -6.21 - - - -5.89 -6.0 0.31
-0.09 0.87 -0.49 -1.9 0.14 0.11 2.44 -0.81 -1.37 -1.37 -0.26 -1.2 -0.71 -0.67 -0.58 -1.27 -2.02 -0.37 0.72 0.07
- - - - - 1.75 4.05 -8.45 -5.6 -4.83 - -6.97 -6.39 - - - -4.88 - - -
-2.51 -1.83 -2.54 - -4.58 -4.38 4.2 -5.99 - -5.32 -4.67 -6.53 - - - - -3.08 -2.08 -5.74 -1.03
- - - - - - 4.32 - - - - - - - - - - - - -3.85
-1.63 -2.7 -0.65 - -2.97 - 3.93 - - - - - - - - - - - - 1.81
-4.17 - - - - 2.36 3.88 - - - - - -4.38 -4.71 - - - - - -
-2.6 - -6.44 - -5.35 -0.67 4.26 - - - - - - - - - - - - -
-1.06 -0.6 -2.54 -0.18 0.36 0.28 3.71 -2.11 - - - -4.59 - - -5.49 -2.01 -2.5 -0.84 -6.39 -0.08
-2.69 0.04 -1.56 -1.75 -1.14 -0.72 3.09 -0.54 -0.63 -0.73 -0.14 -0.91 -1.38 -1.38 0.08 -0.63 -2.21 -0.65 0.28 -0.61
-4.85 - - - - -0.54 4.08 -6.7 -5.53 -5.81 -5.05 - - - - - - - 1.08 -2.15
- - - - - - 4.32 - - - - - - - - - - - - -
-0.97 -0.94 0.52 -2.54 -2.12 -3.04 4.05 -8.73 - - - - - -8.52 - - -4.56 -7.24 -7.68 -1.38
-2.85 - - - - 1.29 4.12 - - - - - - - - - - - -4.26 -
0.65 -0.05 0.2 - -0.09 - 3.22 -2.15 -1.1 - - -3.99 - - - - - 0.8 1.13 0.51
-4.33 - - - - -1.03 4.28 -7.59 - - - - - -6.72 - - - - -5.28 -
-6.22 - -5.17 -4.54 -6.08 0.58 4.16 -6.69 -5.25 -4.7 -6.34 -4.71 - -7.75 - -5.95 - - -1.62 -
- -4.71 - - - 1.02 4.13 -8.12 - - - -6.03 - - - - -4.55 - -1.53 -
-7.72 - -6.76 - - 1.07 4.11 -7.01 - -4.98 - -6.36 - -6.59 - - - -6.94 -0.88 -5.0
-4.01 - -1.37 -1.3 -1.85 -0.13 3.53 -0.04 -1.24 -0.12 -3.11 -2.96 -0.74 - -1.16 0.65 -1.04 - -0.39 -
-5.89 - - -4.79 -5.4 1.83 4.0 -7.66 - - -6.51 -8.27 - -7.95 - - - - -8.11 -1.71
-0.82 0.38 -0.11 -0.03 -0.05 -1.32 3.36 -1.91 -1.53 -1.13 -1.05 -3.03 -2.7 -3.18 -1.17 -2.99 -2.89 -1.06 -0.01 -1.09
-4.34 -3.86 -4.08 -6.3 -5.91 0.04 4.13 -7.79 -3.59 -4.1 -2.07 -9.1 -8.61 -7.9 -1.93 -9.45 -6.63 -5.01 -1.37 -2.64
-1.34 -2.11 -2.82 -2.15 -2.2 -0.92 3.94 -4.17 -2.91 -4.69 -4.9 -6.81 - -6.32 -4.08 -4.57 - -2.15 0.38 0.02
- - - 0.89 - -0.48 4.05 -4.32 -2.71 - - -2.62 - - - - - - -0.83 -
-1.1 - -0.83 -2.0 0.18 -1.43 3.46 -0.64 -1.96 -1.92 -0.75 -1.94 -1.0 0.24 -1.88 -1.54 -0.24 -2.88 -2.93 -0.39
0.45 -1.78 -0.25 -0.8 1.34 -0.6 3.0 -1.4 -1.74 -2.18 -2.21 -1.91 -1.55 -2.04 -2.41 -1.32 -1.49 0.3 0.31 -1.52
0.19 -1.48 -1.48 0.62 0.49 -1.05 3.29 -1.18 -1.8 -1.96 -1.12 -1.87 -1.3 -1.67 -1.67 -1.94 -2.08 -0.94 -0.33 -1.36
-0.21 -1.56 -1.09 -0.12 -1.04 -1.55 3.57 -1.2 -1.17 -1.42 -2.11 -2.11 -2.19 -1.75 -2.27 -0.77 -1.35 -0.47 -1.54 -2.01
- -8.25 -7.68 - -7.34 -2.21 4.28 -11.71 -10.96 - - -11.2 - -9.81 -8.54 -9.13 - -9.46 -2.15 -2.81
- - - - -3.24 3.21 3.27 -4.28 -4.78 -3.98 -1.67 -4.12 -3.63 - - -2.95 - - -2.03 -
-0.57 -3.46 -0.89 -2.89 0.03 -3.35 3.7 -1.79 -1.17 -1.63 -0.41 -3.21 -1.8 -2.59 -1.07 -3.1 -2.3 -3.12 -1.12 -0.45
-7.31 -5.16 -4.98 - -5.68 -5.02 4.15 -2.85 -2.89 -2.89 -1.46 -3.51 -2.6 -3.0 -0.79 -3.13 -2.46 -6.51 -9.18 -3.42
- - - - - -1.27 4.28 - - - - -3.27 - - - - - - - -
- - - -1.53 - 2.24 3.9 -5.55 - - - - - - - - - - - -
- - - - - - 4.32 - - - - - - - - - - - - -
-4.53 - -3.37 - - 1.46 4.03 - - - - - - -4.98 - - - - -0.34 -
- - - - - - 4.3 -6.7 - - - - - - - - - - -4.71 -2.1
- 0.93 0.76 - - - 3.93 - - -0.97 - - - - - - - - -0.65 -
-1.58 -0.45 -1.58 -0.23 - -0.0 2.95 -1.93 -0.17 -0.11 0.66 -1.46 -0.86 -1.49 0.86 -1.65 -0.17 -2.1 -1.45 -1.01
-6.94 -9.07 -6.98 -8.14 -7.16 -0.22 4.25 -7.51 -8.54 -11.04 -7.7 -7.28 -8.58 -9.36 -8.4 -7.14 -5.94 -7.56 -5.87 -5.05
- - - - - 2.22 3.82 -3.82 - - - - - -0.25 - - - - -1.99 -
-0.51 -0.37 -1.39 - - 0.77 3.22 -1.55 -2.17 -0.69 -0.56 -1.41 -1.79 -1.38 0.31 -0.84 - - 1.08 -1.62
-8.36 -7.25 -7.22 - - - 4.07 -7.64 -4.93 -5.06 -4.58 -9.31 -6.9 -6.17 -4.15 -6.27 - - - 1.56
-2.21 1.13 -0.88 - -5.45 - 3.9 -6.9 - - - - -6.88 - - - - - -3.54 1.03
-1.56 -1.31 -1.13 -0.75 -0.66 -2.33 3.85 -2.55 -2.98 -2.18 -2.47 -3.07 -2.1 -2.82 -2.27 -3.5 -3.32 -0.82 -5.79 -0.45
-1.84 -1.73 -0.48 -1.19 -0.82 - 2.66 -0.11 0.16 -0.53 -0.97 0.04 -0.24 0.2 -0.26 -0.28 0.15 0.17 -0.43 -1.07
-1.11 1.89 -0.89 -0.02 0.08 -2.68 3.0 -0.99 -1.74 -1.62 -2.24 -1.79 -0.5 -0.44 -2.67 -2.81 -2.98 -1.32 -0.35 -1.31
- - - - - 0.81 3.94 -1.3 -0.95 - - - - - - - - - -0.88 0.53
-12.77 - -13.45 -10.89 -9.3 -0.54 4.27 -13.73 - - - -15.54 - - - - - -12.39 - -10.41
- -1.19 -1.36 - -0.23 0.25 3.03 -1.08 -0.82 -2.19 -1.4 -1.83 -0.42 -1.0 -0.95 - -2.24 1.1 0.6 0.47
-2.01 -1.59 -0.93 -3.46 -3.18 1.95 2.89 -1.39 -1.14 -1.16 0.3 -2.19 -0.25 -1.22 0.34 -2.19 -3.91 -1.64 -1.53 0.24
-1.37 -1.46 -2.48 - -3.53 2.24 3.1 -1.37 -0.79 -1.1 0.24 -1.5 -0.7 -2.07 -0.82 -1.92 - -3.67 -1.56 -0.71
-0.74 -0.63 -1.04 -1.77 -0.12 -0.46 2.51 -0.42 -0.33 -0.36 -0.52 -0.5 -0.33 -0.57 -0.29 -0.65 -0.59 0.29 0.36 -0.3
-0.99 -1.48 -1.54 -1.72 -0.53 -0.6 2.37 -0.34 -0.32 -0.24 0.64 -0.25 -0.48 -0.37 0.58 -0.6 -0.62 0.09 0.0 -0.37
-6.2 -5.81 -6.43 -6.59 -7.24 -3.51 4.27 -3.96 -2.79 -4.8 -4.85 -5.58 -3.79 -2.78 -5.84 -6.25 -4.98 -9.27 -8.64 -8.61
-2.25 -3.91 -4.0 -3.37 -3.95 1.88 3.92 -4.7 -5.71 -3.87 -5.09 - -4.78 -5.55 -5.15 -4.37 - -2.58 -2.56 -4.16
-1.49 0.07 - - - - 3.64 -1.54 -1.78 -1.33 0.43 -3.9 -1.34 - -0.24 0.7 - - -0.25 -
-6.96 -6.78 -10.12 -7.98 -7.1 -8.75 4.31 -9.66 -11.91 - - -13.07 - -12.77 - -9.76 -9.77 -5.36 -4.94 -5.95
-1.08 -0.22 -2.52 1.04 -2.12 -0.4 3.85 -3.46 -4.7 - -3.8 - - - - - -1.8 - - -0.87
-2.74 - -2.06 -0.88 -1.42 -1.85 4.07 -2.21 -4.83 -4.39 -4.63 -5.97 -5.17 - - -4.08 -5.09 -0.13 -2.93 -4.28
- - -13.79 - - 1.34 4.03 -5.53 - - - - - - - - - - -1.09 -0.67
-3.57 -4.46 -10.52 -5.55 -5.72 -5.4 4.17 -2.83 -2.28 -0.84 -10.09 -2.3 -5.09 -6.38 -8.22 -1.76 -1.61 -4.27 -6.85 -10.21
-1.59 1.15 -1.92 -1.9 -3.6 -0.2 3.26 -1.39 -1.92 -2.37 -1.66 -1.69 -0.02 -0.95 -0.31 -0.31 -0.83 -1.12 -1.87 -1.03
-3.35 -2.56 -5.72 -4.01 -2.05 -0.2 3.48 -1.11 -1.36 -0.33 -2.32 -3.28 -1.13 -1.19 -1.63 -1.37 -1.63 -0.19 0.48 0.32
- - - - - -0.98 4.28 - - - - - - - - - - - - -
-5.43 0.55 -3.17 -6.99 -3.05 -1.04 2.79 -1.66 0.34 -0.23 -1.09 -2.66 0.26 0.03 -0.58 -2.27 -3.99 -0.92 1.9 -1.3
0.19 - - - - 0.52 4.12 -4.87 - - - - - - - - - - - -
-5.51 - -4.84 - - 1.75 4.02 -5.94 - - - -5.62 - -4.76 - -4.14 - - -3.59 -3.54
-5.3 - -5.19 - - 1.45 4.04 -5.37 -5.91 -6.08 - - -4.83 -5.0 -5.56 -5.05 - - -0.71 -
-1.7 -0.45 -2.85 -1.79 -0.44 0.29 2.7 -0.58 -0.21 -0.11 -2.93 0.35 -1.26 -0.88 -2.7 -0.23 -0.0 0.46 0.52 -1.11
- - - - - - 4.3 -5.61 - - - - -1.67 - - - - - - -
-1.52 1.07 -1.21 -1.19 -2.8 0.17 3.22 -0.56 -0.71 0.1 -0.34 -0.57 -2.61 -3.4 -0.49 -1.02 -2.4 - -1.78 -1.53
-5.31 - - - -4.23 1.9 3.9 -5.1 -5.11 -3.5 - -5.12 -3.58 -3.77 -4.54 -4.03 - - -0.64 -2.21
-8.57 - -9.88 -8.2 - 2.47 3.83 -7.4 -9.38 -8.16 -7.63 -9.17 -10.25 -12.16 -7.33 -9.1 -9.84 -8.94 -6.48 -2.36
-8.12 - - -6.8 -10.2 2.42 3.85 -7.79 -8.0 -7.32 -8.08 -9.25 -8.13 -9.6 -7.55 -8.78 - -8.49 -6.61 -2.56
-0.85 -0.35 -0.91 -2.47 -0.56 -0.97 2.92 -1.4 -1.85 -1.37 -1.71 -1.39 -2.34 -2.35 -1.53 -3.31 -3.0 -0.28 0.35 2.13
-0.46 -0.73 -1.41 -1.36 -1.53 -0.81 2.76 -0.36 0.33 -0.31 -1.17 -0.62 -2.59 -1.62 -1.46 -0.03 0.74 -0.2 0.61 -1.4
-0.41 -1.46 0.02 -0.33 0.08 -2.35 2.68 -0.76 -0.87 -0.63 -0.5 -0.74 -2.07 -1.23 -0.22 0.58 -0.65 -0.61 -0.54 0.43
-1.02 -0.28 -0.39 -0.89 -2.03 -0.75 3.52 -3.52 -11.25 - - -8.96 -11.03 -9.49 -8.83 -2.98 -3.49 1.03 -0.28 0.94
- - - - - - 4.32 - - - - - - - - - - - - -
- 1.51 0.5 - - - 3.84 -1.97 - - - - - - 0.16 - - - - -
-3.51 2.33 -2.71 -3.06 -2.12 -0.06 3.4 -2.74 -1.94 -1.91 -2.22 -4.11 -2.91 -2.33 -2.28 -1.01 -3.58 -2.66 -0.75 -4.0
- - - - - - 4.29 -1.29 - - - - - - - - - - - -
-0.94 -0.8 -0.11 -0.91 -1.48 -1.28 3.36 -0.12 -1.74 -0.66 0.07 -1.61 -1.52 -0.83 -1.04 -1.55 -2.25 0.29 - -8.46
-4.96 - -1.62 - - - 4.3 - - - - - - - - - - - - -
-2.74 -2.94 - -2.98 -4.01 0.37 4.09 -5.52 -5.79 -4.94 -4.71 - -5.1 -5.69 - - - -3.86 -0.05 -4.77
- -0.87 -1.4 -1.13 - -2.69 3.59 -2.62 -1.32 -1.16 -3.13 -2.37 -2.24 -3.48 -0.15 -1.52 -0.82 -0.0 0.43 -0.66
-1.16 -1.53 -1.77 -1.07 -0.86 -2.6 3.1 -0.84 -0.43 -0.38 -0.6 -1.52 0.4 0.63 -0.39 -1.55 -2.07 -0.9 -0.63 -0.62
- - -5.21 - -3.2 -3.16 3.47 -3.31 -3.2 -3.22 -4.78 -5.88 -5.47 -3.98 -4.77 -4.7 -1.52 -2.89 -5.15 2.94
-5.86 - - - - - 4.32 -7.84 - - - - - - - - - - - -4.57
- - -2.37 - - - 4.24 - -3.97 - - - - - - - - - - -0.23
- - - - -0.99 - 3.65 -2.45 -1.1 -0.91 - -5.68 -3.96 0.06 -3.9 1.56 -1.11 - -3.25 0.06
- - - - - - 4.23 -3.92 - - - - -1.89 - - -0.21 - - - -
-2.17 - -3.79 1.17 -0.7 -2.48 2.94 -2.43 -3.81 -2.6 1.19 -1.18 -2.41 -1.3 1.21 -3.09 -4.29 -4.83 -2.81 1.38
-6.26 - - - - -4.06 4.28 -8.53 - - - - - - - - - - - -0.97
-0.0 -3.39 -0.35 -0.52 0.89 -7.81 3.89 -2.91 -7.05 -7.19 -5.48 -4.54 -8.37 - -8.23 -7.31 -4.44 -2.23 -5.94 -1.77
- - -3.29 - -0.14 - 3.99 -2.62 -4.03 -2.48 - -5.07 - -4.75 - -2.59 -1.79 -0.63 -0.89 -0.03
- - - - - - 4.03 -1.71 - - - - - - - 1.49 - - -0.71 -
-3.48 - - - - - 4.23 -2.72 -4.39 - - -4.47 - - -2.68 - - - -3.98 -0.66
-1.07 1.57 -0.48 0.27 1.18 -1.89 2.68 -1.27 0.13 -0.09 -2.19 -2.46 -0.99 -1.21 -2.54 -2.96 -2.9 -0.29 -2.58 -1.01
-1.91 -1.77 0.71 -1.24 -1.32 0.53 3.56 -2.56 -2.36 -1.46 -0.69 -2.9 -0.93 -3.45 -0.57 -1.07 -2.83 -2.99 -4.56 -2.24
-4.09 -2.44 -4.19 -4.44 -4.13 -1.6 4.08 -4.13 -3.08 -2.9 -3.87 -4.65 -3.87 -4.32 -3.08 -4.93 -5.24 -3.5 -0.1 -0.58
- - - - - - 4.32 -7.99 - - - - - - - - - - - -4.0
-1.09 -3.89 -1.76 -4.33 -5.89 -3.15 3.8 -1.56 -1.09 -1.17 -1.71 -3.99 -2.28 -2.66 -0.95 -0.92 -1.1 -2.48 -1.6 0.08
-2.76 - -3.53 -0.82 -2.4 2.46 3.58 -2.67 -5.37 - - - - -5.03 - -1.12 -2.41 -3.57 -0.73 -
-2.36 - -3.1 -2.35 -5.02 -2.75 3.37 -1.05 -0.85 -0.68 -1.94 -1.12 -1.91 -1.39 -2.36 -0.45 -0.69 0.78 0.14 0.67
-5.76 -5.7 - -5.57 -6.83 2.67 3.72 -5.57 -7.92 -8.67 - -9.83 -8.2 -9.29 -7.44 -6.46 -6.78 -4.19 -2.17 -5.49
- - - - - 2.63 3.69 -3.99 -3.83 -2.97 - - -2.4 - -2.41 - -2.11 - -3.84 -
-2.3 -5.13 -6.3 - - -5.1 4.12 -7.4 - -7.11 - - -7.69 - - - - - - 1.18
- - - - - 1.24 4.13 -5.55 - - - - - -3.89 - - - - -3.8 -
-3.94 - -4.49 - -3.64 -0.41 4.21 -5.89 -5.51 -3.86 - -4.01 -5.81 -6.14 -3.77 - - - -1.7 -
-2.42 -4.29 -2.38 - -1.88 3.9 1.51 -5.1 -5.5 -6.27 -5.48 -4.16 -4.38 -3.65 -5.68 -4.1 - -4.05 -0.4 -1.65
-6.69 -8.94 -8.03 - -7.44 -0.16 4.25 -9.0 -8.5 -9.94 -8.6 -8.16 -8.81 -8.39 -7.94 - -8.78 -6.65 -3.56 -9.19
- - - - - - 4.28 - -3.28 - - -3.66 -3.1 - - - - - - -1.8
-3.16 - - - - 1.37 3.76 -6.76 -2.87 -3.01 -4.24 - - - - - - -4.38 1.73 -4.28
-0.04 0.85 0.43 -0.88 0.96 -0.06 2.94 -1.46 -1.15 -1.44 -1.07 -1.17 -2.58 -2.44 -0.97 -2.12 -3.53 -0.47 -3.98 -0.55
-1.12 0.68 -1.24 -3.06 -0.23 -0.21 3.08 -1.43 -2.51 -2.12 -2.02 -2.02 -2.06 -2.7 -1.62 -1.61 -2.08 -0.47 1.12 0.85
-1.16 1.81 -0.32 -1.53 -0.57 -0.49 2.83 -1.48 -1.75 -1.89 -2.07 -1.06 -1.34 -1.44 -1.98 -1.33 -1.7 -0.86 -0.25 0.73
-1.41 - - - -2.52 1.48 3.66 -2.34 - - -1.56 -4.49 -1.26 -0.66 - - -2.02 -0.66 - 0.57
- - - - - - 4.32 - - - - - - - - - - - - -
-3.63 1.3 -1.67 -0.77 - -0.4 3.13 -2.39 -1.85 -1.37 -0.73 -2.24 -4.0 -0.79 -1.31 -1.16 0.42 -2.71 0.51 -0.02
-4.74 -1.56 -1.16 -6.33 -5.13 -8.7 4.22 -8.01 -6.74 -8.51 -5.92 -8.33 -8.57 -7.24 -6.59 -4.83 -7.52 -7.88 -7.53 -1.3
0.08 0.22 -0.8 - - 0.39 3.26 -0.43 0.02 -0.78 - -1.91 -1.2 0.17 -1.03 -0.66 - -0.99 -0.87 -
-2.94 0.09 -0.6 -0.33 -1.62 -1.73 3.7 -2.63 -2.18 -2.53 -1.58 -3.16 -4.03 -4.39 -2.59 -4.28 -3.48 -1.29 0.27 -0.56
-5.34 -4.53 -4.63 -5.25 - 1.93 4.0 -8.57 -8.9 -10.13 - -7.72 - -8.42 - - -9.16 -8.39 -8.0 -9.53
-5.28 -0.33 -4.04 -5.92 -3.55 -1.96 3.48 -2.44 0.25 -0.7 -2.01 -3.35 -0.04 -0.48 -1.42 -2.86 -4.73 -1.96 1.32 -1.78
-3.19 - -2.2 -0.49 - 1.47 3.56 -0.66 -0.73 -0.65 -1.23 -0.93 -1.37 -1.62 - - - -1.31 -1.15 -
-4.11 -2.33 1.87 -3.38 -6.4 - 3.83 -6.64 -7.53 -6.64 -3.87 -4.38 -4.43 -6.03 -4.81 -4.31 -4.73 - -9.04 0.55
-1.39 -1.19 0.6 -1.33 -1.42 -2.34 3.3 -2.09 -2.46 -2.22 -1.84 -0.47 -3.17 -2.01 -1.96 -1.14 -0.68 -1.34 -2.55 1.55
-1.26 - -2.46 - -1.39 4.01 1.13 -5.21 -5.68 - - -5.39 - -3.92 - -3.97 -3.78 -2.59 -2.43 -4.75

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.