Heatmap: Cluster_30 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule
Ovule, mature
Ovule, pollinated
Strobilus, female
Ovulate strobilus
Microstrobilus
Kernel
Leaf
Leaf, female
Leaf, male
Leaf, salicylic acid
Leaf, seedling
Leaf, truncation control
Leaf, truncation treatment
Leaf, water
Yellow-green stripe leaves
Green leaves
Stem
Cambium
Root
1.11 - - - - - - 0.41 0.29 -1.4 - -1.3 - - 2.71 - 0.64 -0.44 2.5 -
- - - - - - - 4.32 - - - - - - - - - - - -
-2.47 0.69 0.23 2.13 -4.62 -3.59 -2.55 0.45 -4.52 -4.83 -1.31 -2.47 -3.93 -3.62 -1.53 2.75 1.6 -4.78 -4.92 -8.17
-1.42 2.06 2.09 0.8 - 0.37 0.38 -0.87 - -1.24 - - -1.69 - -1.64 1.77 -0.09 - -0.78 -1.67
3.24 - - - - - - -5.16 - 3.35 - -1.72 - - - - - - - -
- - - - - - - 0.67 -3.79 - - - - - -23.55 - 3.63 - 2.57 -
-7.29 1.76 1.14 0.25 -7.57 -7.09 -0.1 -0.99 -8.26 -8.57 -5.59 -6.84 -8.32 -8.1 -5.49 2.83 2.18 -6.75 -5.06 -6.8
-1.47 -2.77 -2.38 1.66 -3.09 -2.65 -1.42 -0.92 -0.83 -0.98 1.41 -1.36 0.72 0.95 1.62 -0.04 -0.61 -2.33 1.06 -1.82
- - - - - - - 4.32 - - - - - - - - - - - -
-0.8 - -1.28 2.28 1.19 - -1.28 0.04 -2.0 -2.16 -0.47 - - -2.82 0.05 1.08 1.18 0.81 0.95 -
-2.06 0.26 -0.82 1.22 -4.69 -4.17 -2.07 -0.68 -4.7 -4.48 -1.2 -3.87 -3.2 -3.31 -1.36 3.29 1.8 -3.91 -2.79 -3.9
- - - - - - - -0.33 0.88 - - - - - - - - 3.57 2.47 -
1.96 - - - - - - -3.13 - - - - - - - 3.21 2.42 - 0.44 -
-4.13 0.58 1.01 1.04 -3.07 -0.31 -1.84 -0.48 -0.92 0.25 -2.16 -2.48 - -1.96 -0.46 -1.46 -0.07 -1.25 2.85 -1.35
- - - 4.16 - - - - - - - - - - - - - - 1.05 -
-4.8 -1.15 -0.13 2.55 -2.89 -3.07 0.1 0.41 -4.87 -5.13 -1.6 -1.99 -3.75 - -2.95 2.24 1.9 - -1.57 -1.13
0.54 - - 3.2 - - - 0.22 - - - -0.45 - 0.11 - - 1.61 - -0.11 1.24
-0.85 - -4.44 1.14 -1.81 -3.37 -1.98 -1.3 -0.13 0.19 1.18 -1.05 1.27 1.45 1.53 -0.43 -0.33 -2.03 0.43 -2.33
- - - - - - - -0.33 0.88 - - - - - - - - 3.57 2.47 -
-1.78 -2.96 -2.83 -0.15 -4.03 -3.33 -1.32 -1.53 -1.43 -0.83 2.62 -2.13 -0.83 -0.97 2.54 -0.27 0.74 -3.06 -1.51 -1.12
- - 0.07 - - - - -0.43 - - - - - - - - - - 4.19 -
- - - - - - - -0.33 0.88 - - - - - - - - 3.57 2.47 -
-3.94 1.28 0.83 1.98 -4.49 -2.0 -0.2 0.66 -4.65 -4.09 -0.51 -2.96 -4.14 -4.05 -1.12 1.79 1.66 -3.32 -1.05 -1.53
1.02 - - - 2.12 - - -0.03 - - - 0.08 - - - 2.31 - - - 2.73
- - - - - - - 0.17 - - - - - 3.21 - - - - 3.27 -
- - - - - - - - - - - - - - - - - - 4.32 -
- - - - 2.6 - - -2.58 - 0.79 - - - - - 3.47 - - -0.02 -
-1.83 1.67 0.04 2.82 -2.63 -3.49 -1.25 -0.25 -4.41 -4.2 0.26 -2.85 -0.65 -0.54 -0.04 0.49 0.32 -2.75 -2.05 -2.94
-2.73 0.51 -0.99 2.32 -4.08 -3.6 -0.62 1.33 -2.89 -3.75 0.83 -3.19 -3.05 -3.09 0.68 1.82 0.97 -4.57 -2.82 -20.86
-1.7 -0.4 -0.66 1.75 -3.36 -4.12 0.14 -0.71 0.7 0.74 0.84 -0.68 -0.39 -0.57 1.13 -0.04 0.59 -2.24 -0.48 -1.65
-1.72 - - 1.98 - -2.65 -2.09 0.07 -0.64 -0.4 1.12 -4.44 -1.29 -0.75 0.84 2.23 0.12 -2.89 0.36 -0.54
-1.16 -0.66 -0.34 1.91 -2.32 -1.58 -0.82 0.16 -3.42 -3.25 -0.46 -3.26 -4.11 -2.83 0.54 2.14 1.29 -2.89 0.93 -0.83
-2.7 -0.75 -1.89 0.92 -4.43 -4.01 -2.7 -0.62 -3.78 -3.9 -1.21 -3.72 -4.73 -4.17 -1.34 3.52 1.79 -4.06 -4.12 -5.56
- - - - - - - - - - - - - - - 4.32 - - - -
0.38 0.14 0.07 0.53 0.49 0.02 -0.27 -0.06 -0.51 -0.52 -0.17 -0.78 -0.61 -0.85 0.05 -0.17 -0.52 0.63 0.52 0.27
-0.85 0.25 -0.78 1.6 -2.08 -2.9 -1.75 0.01 -3.15 -2.56 0.01 -2.51 -3.35 -3.23 -0.25 2.92 1.21 -6.07 -1.31 -2.81
-1.23 -2.16 -0.62 2.19 -2.87 -1.75 -2.25 -0.11 -3.82 -3.33 -0.21 -2.45 -4.62 -5.16 -0.67 2.96 1.23 - -1.27 -3.22
- - - - - - - 4.32 - - - - - - - - - - - -
-2.07 -2.34 -0.65 2.24 -1.17 -2.76 -0.09 -0.35 -3.73 -1.99 -0.18 -4.31 -1.71 -3.4 0.68 2.72 -0.42 -6.76 -0.09 -1.6
- - 4.32 - - - - - - - - - - - - - - - - -
- - 3.27 - 3.37 - - - - - - - - - - - - - - -
-1.95 -1.23 -0.76 0.58 -2.09 -1.55 -5.49 0.79 -2.43 -3.38 1.3 -2.64 -1.08 -0.76 0.58 0.77 2.86 -2.27 -1.89 -6.48
-3.8 -0.55 -0.39 2.81 -2.74 -3.65 -0.6 1.25 -5.08 -4.75 -0.53 -5.74 -3.71 -3.78 -0.12 1.85 1.35 - -2.59 -5.78
- - 2.34 2.89 - - 0.57 - - - - - - - - - - 2.59 - -
1.2 - - 3.55 -0.35 -0.78 -2.62 -1.54 -2.9 -2.8 - -3.78 - - - - - - - 1.9
- - - - - - - - - - - - - - 4.32 - - - - -
- - - - - - - -0.88 - - - - - - - 3.82 2.42 - - -
- - - - 3.34 - - 0.51 - - - - - - 2.07 - - 2.09 - -
-1.78 -2.96 -2.83 -0.15 -4.03 -3.33 -1.32 -1.53 -1.43 -0.83 2.62 -2.13 -0.83 -0.97 2.54 -0.27 0.74 -3.06 -1.51 -1.12
0.18 - - - - - - -0.6 - - 1.1 - - - 0.95 2.84 - - 0.69 2.43
-1.27 - - - -1.72 -1.43 -1.98 -0.57 -1.55 -2.12 1.68 -0.52 -0.47 -0.62 1.84 1.38 -2.76 - 2.42 -1.1
- - - - - - - -1.06 - 2.25 2.97 - - - 2.8 - - - - -
0.29 -2.04 -2.03 2.32 -2.79 -2.52 -0.96 -1.16 -1.79 -1.43 1.75 -1.61 -0.21 0.34 1.56 -0.28 -0.34 -4.33 -0.46 -2.57
-4.44 0.91 0.01 3.04 -3.33 -3.03 -1.65 -0.42 -5.11 -6.67 0.85 -3.45 -2.14 -1.33 0.42 1.1 0.34 -3.75 -3.01 -3.88
-3.57 2.0 1.16 2.6 -2.16 - 0.2 -0.49 - - -1.6 -5.19 - -4.57 -2.26 1.0 1.11 -4.27 -1.03 -2.17
- - - 2.81 0.61 - - -0.76 - - - - -0.88 - - 2.62 1.37 - 0.71 -
- - - - - - - - - - - 2.1 - - 3.97 - - - - -
- - - - - - - - - - - - - - - - - - - -
-3.09 -0.51 -1.73 0.07 -4.43 -4.37 -0.2 -1.87 0.39 1.32 2.05 -2.74 -2.06 -2.19 2.11 -0.56 1.18 -3.99 -1.11 -2.08
- 2.39 0.75 - - -1.16 -1.97 -0.77 -1.92 -0.6 1.19 -1.68 - - 0.84 1.99 0.96 - -1.96 -1.65
-1.68 -1.8 -1.96 0.6 -4.49 -4.34 -1.2 -1.75 -0.46 0.29 2.31 -2.19 -1.14 -0.84 2.16 0.21 0.99 -2.86 -1.42 -0.94
-1.56 1.03 0.19 2.3 -3.24 -3.8 -0.82 -1.15 -1.47 -1.59 1.12 -1.52 -0.32 0.42 0.77 -0.03 0.73 -4.15 -1.68 -1.89
-3.24 -0.0 -1.57 0.19 -4.54 -4.32 -0.23 -2.08 0.73 1.71 1.88 -3.02 -2.58 -2.86 1.94 -0.61 1.07 -4.12 -1.7 -2.05
-2.08 0.0 -0.31 2.27 -1.93 -2.67 -1.75 0.1 -3.25 -3.79 0.41 -2.32 -2.7 -2.04 0.17 2.29 0.92 -2.54 -0.1 -1.96
-1.34 -1.01 -1.12 0.29 -2.35 -0.59 -0.61 -0.51 -1.36 -1.11 1.51 -1.13 -0.82 -0.78 1.78 0.35 -0.13 -2.37 1.86 -1.13
-3.77 0.58 0.64 2.72 -4.52 -4.18 -1.24 -0.59 -4.53 -3.33 0.72 -3.17 -3.56 -2.98 0.8 1.24 1.03 -3.65 -0.85 -2.28
-4.04 0.77 0.74 2.32 -4.48 -6.69 -1.04 -0.24 -4.1 -2.98 1.05 -2.89 -2.97 -2.59 1.25 1.24 0.92 -3.23 -1.11 -1.67
-5.31 1.72 0.66 2.89 -4.15 -4.25 -1.44 -0.57 -6.2 -7.44 -0.38 -3.36 -2.18 -1.39 -0.77 1.29 0.92 -5.1 -4.29 -5.11
1.92 0.17 2.34 0.74 0.87 -1.13 - -0.9 -1.16 -0.59 -0.66 -2.14 - - -1.53 1.36 -1.19 -2.19 - -
0.3 -0.13 -1.35 2.05 -3.04 -1.13 -0.87 -0.71 -1.44 -1.48 1.57 -1.3 -0.5 -0.38 1.32 -0.01 -0.1 -2.82 0.16 -1.66
0.38 -0.63 -0.93 1.86 -2.12 -3.27 -0.95 -0.86 -1.08 -1.85 1.51 -1.81 0.46 0.26 1.38 0.35 0.01 -1.63 -0.44 -3.77
-1.57 -2.17 -2.12 -0.08 -3.44 -3.94 -1.24 -1.51 -0.66 -0.06 2.57 -2.57 -0.79 -0.73 2.55 -0.61 0.31 -3.36 -1.78 -1.72
- - 2.89 - - - - 1.55 - - - - 1.36 - - - - - 2.82 -
- 2.7 - 3.16 - - - -1.7 - 0.6 - - 0.08 - - - - - 0.79 -
-4.65 1.14 0.03 3.18 -3.66 -4.15 -1.68 -0.54 -5.65 -6.56 0.64 -3.91 -4.94 -3.58 0.29 0.95 0.45 -3.92 -3.4 -3.82
-2.62 1.89 0.74 1.86 -1.68 - 1.68 -0.4 -1.23 -2.12 -2.14 -4.08 -1.63 -2.02 -0.49 0.18 0.51 -1.61 -0.04 -1.14
- - - - - - - - - - - - - - - - 4.32 - - -
-2.69 -0.18 -0.45 2.73 -1.9 -1.76 -2.25 0.16 -3.55 -4.24 0.73 -2.21 -3.66 -2.62 0.43 1.84 0.34 -2.25 -0.42 -1.77
-6.99 2.57 1.59 0.51 -9.67 -7.28 -1.09 -0.91 -8.44 -8.64 -6.61 -7.39 -7.17 -7.82 -6.18 2.37 1.75 -7.9 -4.83 -7.71
-2.42 -1.71 -2.14 0.76 -4.02 -3.69 -0.54 -1.86 0.23 1.01 2.19 -2.33 -1.3 -1.03 2.13 -0.42 0.63 -2.95 -0.88 -1.68
-1.37 1.96 -0.92 1.5 -1.3 -1.7 -0.9 -1.47 -1.68 -1.8 1.17 -0.3 -0.18 -0.8 0.82 -0.54 0.47 -2.26 0.24 -1.33
- - - - - - 1.47 -0.99 - 1.23 - - - - - 2.78 - - 2.91 -
- - - - - - - - - - - - - - - - - - - -
-2.9 -2.32 -2.49 0.16 -4.38 -4.06 -1.28 -2.02 -0.03 0.6 2.52 -2.54 -1.07 -1.01 2.46 -0.85 0.68 -3.81 -1.77 -2.19
- - - 2.68 - - - 0.68 0.37 0.17 - - -0.41 - - 3.14 - - - -
- - - - - - - - - - - - - - - - - - 4.32 -
-3.73 0.48 0.31 0.96 -4.58 -3.84 -1.98 0.83 -2.75 -3.27 -0.82 -2.84 -4.87 -4.45 -0.71 2.7 2.24 -3.92 -2.39 -3.45
-0.01 -0.17 0.22 2.14 -1.42 -1.78 -0.77 -0.89 -0.75 -1.45 -0.44 -0.73 0.78 0.93 -0.6 0.22 -1.02 -1.3 0.69 -1.08
-23.69 -23.24 - - - - -1.87 -0.03 -2.85 -3.34 -0.55 -1.76 -2.7 - -0.36 - - - 4.05 -
-5.31 1.72 0.66 2.89 -4.15 -4.25 -1.44 -0.57 -6.2 -7.44 -0.38 -3.36 -2.18 -1.39 -0.77 1.29 0.92 -5.1 -4.29 -5.11
0.29 -2.04 -2.03 2.32 -2.79 -2.52 -0.96 -1.16 -1.79 -1.43 1.75 -1.61 -0.21 0.34 1.56 -0.28 -0.34 -4.33 -0.46 -2.57
- - - - - - - 4.32 - - - - - - - - - - - -
-0.78 1.57 -1.13 1.46 -1.43 -1.34 -1.48 -1.41 -1.48 -1.59 1.12 -0.71 0.18 -0.18 1.16 0.12 0.17 -2.63 0.33 -1.36
-5.31 1.72 0.66 2.89 -4.15 -4.25 -1.44 -0.57 -6.2 -7.44 -0.38 -3.36 -2.18 -1.39 -0.77 1.29 0.92 -5.1 -4.29 -5.11
-2.26 -0.72 -0.15 1.86 -2.8 -3.54 -1.42 0.47 - - 0.47 -2.78 -3.08 -5.28 0.47 2.61 1.04 -3.0 0.42 -
0.37 0.2 - 2.01 -2.17 -0.29 -3.0 -1.35 -2.87 -1.51 0.37 -1.08 0.01 -0.34 0.92 0.9 1.09 - 0.88 -2.5
- -1.16 -2.32 3.77 - - -0.19 -0.05 -2.85 - - -4.3 - -2.1 - - -1.5 -1.92 1.5 -
- 0.77 1.29 3.9 - - -1.01 -1.23 - - - - - - - - - - - -
0.11 0.74 1.24 1.13 0.35 -0.88 -1.33 0.06 -1.35 -1.45 -1.21 -1.17 -0.86 -0.85 -1.16 -0.83 -1.33 0.42 1.77 -0.88
-0.65 0.36 -1.67 2.34 - - -0.12 -0.16 -3.41 -2.63 0.25 - - - -0.32 2.02 0.4 0.65 0.31 -1.09
-1.39 -2.5 -2.49 0.89 -2.93 -2.65 -0.92 -1.33 -0.66 0.02 2.39 -1.58 -0.94 -1.06 2.21 -0.22 0.29 -2.56 -0.62 -1.12
0.91 -0.68 - 2.18 - -0.58 -0.17 -0.48 -1.91 -0.29 2.01 -0.51 -1.24 -2.28 1.35 - -0.53 - -0.01 -
- - - - - - 4.17 0.94 - - - - - - - - - - -6.37 -
- - 3.88 - - - 2.27 -1.23 - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - 2.73 3.74 -
- - - - - - - - - - 4.32 - - - - - - - - -
- - - - - - - - - - - - - - - - - - - -
- - - - - - - -2.8 - - - - - 2.75 - - - - 3.72 -
-3.14 -1.02 -2.38 1.1 -5.03 -4.99 -0.16 -2.23 0.91 1.79 2.02 -3.54 -3.46 -3.88 1.78 -0.73 0.83 -5.35 -1.78 -3.14
-4.22 0.11 0.07 3.81 -2.85 - -0.66 -1.19 -6.22 -5.34 -1.98 -6.33 - -4.87 -2.07 -0.27 -1.31 -4.69 -0.4 -
0.49 -0.17 -0.95 1.83 -1.77 -1.76 -0.63 -0.77 -0.55 -1.03 1.16 -1.0 0.38 0.57 0.92 0.27 0.12 -1.49 -1.29 -2.71
-1.5 -2.43 -2.71 0.15 -3.86 -4.52 -1.1 -1.34 -0.58 0.06 2.59 -2.13 -1.04 -0.76 2.44 -0.54 0.35 -3.72 -1.38 -1.7
-1.99 -1.94 -1.74 -0.13 -1.55 -1.71 -0.5 -0.61 -1.01 -0.69 1.15 -1.68 -1.44 -2.07 1.38 0.03 -0.05 -4.01 2.81 -1.56
-3.03 -2.16 -1.91 2.38 - - 0.9 -1.87 -0.97 -0.21 1.22 -3.96 -1.99 -4.11 0.99 -2.95 -0.42 - 2.22 -1.24
- - -7.67 - - - - 4.32 - - - - - - - - - - - -
- - -7.67 - - - - 4.32 - - - - - - - - - - - -
- - -7.67 - - - - 4.32 - - - - - - - - - - - -
-2.92 1.04 0.25 2.29 -3.58 -4.11 -1.92 1.12 -4.02 -3.93 -0.09 -2.56 -7.54 -7.09 -0.19 2.56 -0.01 -3.73 -4.88 -5.11
2.79 - - - 1.59 - - -0.75 - - - - - - - - - - 3.24 -
-5.85 2.25 1.71 0.44 -5.81 -5.41 0.24 -1.14 -6.59 -7.19 -3.79 -5.88 -6.41 -6.55 -4.11 2.38 1.77 -6.52 -3.52 -5.72
- - - - - - - -0.55 - - - - - - - 4.27 - - - -
-1.14 -1.1 -1.27 0.42 - -0.11 -0.34 -0.5 -2.4 -2.06 1.42 -1.74 -2.79 -1.71 1.8 -0.07 0.64 -2.41 2.18 -1.58
-5.02 0.52 0.76 3.14 -4.94 - -2.18 -0.51 -6.62 -4.81 -0.13 -2.84 -4.67 -3.68 0.39 0.79 0.57 - 0.38 -4.31
-1.31 -1.95 -1.06 1.8 -2.6 -2.57 -1.07 -0.54 -0.12 -0.04 0.23 -0.88 -0.03 0.23 0.65 0.52 0.29 -1.47 1.68 -1.56
-3.34 0.37 0.7 2.53 -3.65 -4.45 -0.95 -0.51 -4.02 -3.34 0.64 -2.98 -3.22 -2.66 0.68 1.52 1.22 -4.22 -0.7 -1.85
- - 1.12 2.83 - - 1.94 -0.98 - -0.73 - - - - - 0.41 - - -0.31 1.87
-1.7 -0.4 -0.66 1.75 -3.36 -4.12 0.14 -0.71 0.7 0.74 0.84 -0.68 -0.39 -0.57 1.13 -0.04 0.59 -2.24 -0.48 -1.65
-0.27 -0.03 -2.78 2.1 -1.68 -1.58 -0.13 -1.02 -2.07 - 0.89 -0.66 0.22 -0.25 1.44 -2.08 -0.17 - 1.26 -0.45
- - - - - - - 1.65 - -1.06 3.24 - -9.63 2.8 - - - - -11.34 -
- 2.47 - 3.63 - - 0.45 -1.53 - - - - - - - - - - -1.29 -
- - - - - - - 1.01 - - - - - - - - - - 4.17 -
-0.31 0.17 -0.25 2.44 -2.94 - -3.79 -0.74 -2.0 -0.78 1.15 -1.39 -2.21 -1.82 0.9 0.13 0.63 -3.14 1.3 -
-3.02 - 0.07 1.24 -1.89 - -1.78 0.57 - -1.86 0.22 -3.83 -2.38 - 1.01 2.63 1.38 -2.21 0.57 -2.3
-6.91 -0.06 -0.84 3.57 -5.8 -5.57 -1.47 -0.56 - -6.82 -1.32 -3.0 -3.32 -2.82 -2.12 1.19 0.92 -3.24 -2.82 -4.17
- - -2.29 2.76 - - -0.39 0.3 -1.31 -4.08 -0.72 - -0.62 - -0.87 - 2.29 - 1.76 -0.97
- - - 4.32 - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - - -
-1.9 -3.21 -3.06 -0.13 -1.84 -1.33 -2.45 1.12 -2.36 -3.43 2.45 -2.34 -0.42 -0.44 1.8 0.81 1.14 -1.84 -1.68 -3.7
-2.63 - - 3.23 -3.99 - -1.14 -0.93 -1.4 -1.6 -0.23 -2.47 -1.06 -1.34 -1.01 - -1.36 - 2.54 -3.18
-1.32 - 0.9 - - - -4.03 0.63 0.72 1.39 -0.07 -1.95 - - - - 1.02 - 2.79 0.76
-1.83 1.14 -0.57 2.71 -1.78 - 1.1 -0.57 -1.88 -0.9 -0.85 -2.17 -3.27 -2.01 -1.01 -0.09 0.59 -3.04 0.97 -2.05
-3.32 0.23 -0.34 2.93 -2.14 -2.11 -2.4 -0.04 -4.39 -4.36 0.17 -3.07 -1.5 -0.7 -0.13 1.71 0.68 -2.26 -1.59 -3.61
-3.18 -0.81 -0.93 0.59 -4.43 -4.16 -1.99 -1.19 -0.53 -0.28 2.42 -1.27 -1.17 -1.23 2.34 0.21 0.46 -4.84 -1.14 -1.93
-1.74 1.39 0.32 2.2 -3.89 -3.8 -0.58 -0.91 -1.66 -0.81 1.15 -1.25 -0.5 -0.15 0.79 0.43 0.19 -3.0 -1.8 -2.83

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.