Heatmap: Cluster_28 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	Ovule	Ovule, mature	Ovule, pollinated	Strobilus, female	Ovulate strobilus	Microstrobilus	Kernel	Leaf	Leaf, female	Leaf, male	Leaf, salicylic acid	Leaf, seedling	Leaf, truncation control	Leaf, truncation treatment	Leaf, water	Yellow-green stripe leaves	Green leaves	Stem	Cambium	Root
Gb_00548	-	-	-	-	-	-	-	4.32	-	-	-	-	-	-	-	-	-	-	-	-
Gb_00673	-	-	-	-	-	-	-	3.29	-	2.56	-	2.12	-	-	-	-	-	-	-	-
Gb_01509	-	-	-	-	-	-	-	4.32	-	-	-	-	-	-	-	-	-	-	-	-
Gb_02276	-	-	-	-	-	-	-	1.85	-	-	-	4.03	-	-	-	-	-	-	-	-
Gb_02856	-	-	-	-	-	-	-	0.89	-	-	-	-	-	-	-	-	-	-	4.18	-
Gb_03495	-0.14	0.87	1.33	-	0.38	-	-	0.57	1.07	-1.38	-	-0.96	-	-1.25	0.07	1.45	1.58	-	-0.33	-0.04
Gb_03859	-	-	1.7	-	1.64	-	-	1.31	-	0.7	-	-	-	-	-	2.25	-	-	1.01	1.46
Gb_04664	-	-	-	-	-	-	1.14	-0.32	-	-	-	-	-	-	-	3.56	1.86	-	0.67	-
Gb_05814	-	-	-	-	-	-	-	4.32	-	-	-	-	-	-	-	-	-	-	-	-
Gb_06074	-	-	-	-	-	-	-	0.95	-	-	-	-	1.73	-	2.79	-	-	-	2.97	-
Gb_07677	-	-	-	1.77	-	2.62	0.21	1.16	-1.46	0.25	-	1.71	-	-0.42	-	-	0.56	-	-	-
Gb_07945	-1.51	-	-	2.15	-	-	-	0.64	-0.67	1.82	0.39	-0.93	-	-	1.63	0.15	-0.05	-	0.93	-0.84
Gb_08127	-	-	-	-	-	-	-	4.32	-	-	-	-	-	-	-	-	-	-	-	-
Gb_08233	-	-	-	-	-	-	-	4.32	-	-	-	-	-	-	-	-	-	-	-	-
Gb_08780	1.87	-	-	3.52	-	-	-	-0.59	-	-	-	-	0.48	-	-	-	-	1.47	-	-
Gb_10037	1.05	1.82	0.99	0.56	0.92	0.46	-0.05	0.39	-0.8	-1.27	-1.13	-1.53	-2.25	-1.84	-0.4	-2.7	-2.91	0.86	-2.02	-
Gb_10262	-	-	-	-	-	-	-	4.32	-	-	-	-	-	-	-	-	-	-	-	-
Gb_11049	-2.66	-	-	-	-	1.6	-	1.41	2.16	2.13	-	-0.67	-0.01	-1.02	-	-0.37	1.28	-	-	-
Gb_11112	-	-	-	-	-	-	-	4.32	-	-	-	-	-	-	-	-	-	-	-	-
Gb_13379	-	0.83	-	1.37	-	-	-	1.14	1.01	0.87	1.93	-0.15	1.31	0.78	-0.56	-	-	-	-	-
Gb_14730	-	-	-	3.32	-	-	-	-0.62	-7.79	1.01	-	-	1.9	-	-	-	1.48	-	-0.27	-
Gb_16473	1.86	1.67	-	-	-	-	1.4	-1.61	-1.19	-	-	-	-	-	-	-	3.0	0.32	-0.99	-
Gb_17019	-	-	-	-	-	-	-	1.88	-	-	-	-	-	4.03	-	-	-	-	-	-
Gb_17256	-	-	-	-	-	-	-	4.32	-	-	-	-	-	-	-	-	-	-	-	-
Gb_17629	1.86	-	-	-	0.08	-	1.63	-0.41	1.41	-0.22	-0.06	-0.64	0.86	1.25	0.41	-	-	-	-	-0.3
Gb_17630	1.62	0.6	-1.58	0.01	-1.32	-	0.0	0.41	-0.3	0.04	-0.61	-0.7	0.75	0.71	0.22	-2.51	-1.27	-0.39	-0.23	0.63
Gb_21760	-	-	-	-	-	-	-	4.32	-	-	-	-	-	-	-	-	-	-	-	-
Gb_21924	-0.31	-	1.22	-	-	-	-	0.13	-0.65	0.4	-	-2.31	0.96	-1.86	-	-	1.6	-0.41	-0.78	2.81
Gb_23180	-	-	-	-	-	-	-	4.32	-	-	-	-	-	-	-	-	-	-	-	-
Gb_23181	-	-	-	-	-	-	-	2.19	-	-	-	-	-	3.95	-	-	-	-	-	-
Gb_24198	-	-	-	-	-	-	-	4.32	-	-	-	-	-	-	-	-	-	-	-	-
Gb_25144	-	3.16	-	-	-	-	-	-0.57	1.1	-	-	-	0.83	-	-	2.69	-	-	-	-
Gb_27017	-	-	-	-	-	-	0.83	3.81	-1.01	-0.32	-	1.51	-	-	-	-	-	-	-	-
Gb_28710	0.99	-1.48	-2.65	-	-0.03	-0.34	0.08	0.2	0.44	0.61	-1.12	-3.03	0.88	-0.78	-0.79	1.17	0.57	0.8	0.22	-1.28
Gb_28745	-	-	-	-	-	-	-	4.32	-	-	-	-	-	-	-	-	-	-	-	-
Gb_30259	-	-	-	-4.65	0.66	-	-0.68	1.8	-0.56	-0.72	-	0.25	-0.09	0.6	-	1.79	-2.02	-	-1.1	2.37
Gb_31065	0.51	-0.53	-0.7	-	2.03	-	-2.32	0.92	-0.1	0.09	-1.74	-	0.91	-0.57	1.33	-	-1.58	-0.3	1.36	-
Gb_31555	-	-	-	-	-	-	0.09	0.19	-	-	-	-	-0.45	-0.51	-	2.67	3.23	-	-0.69	-
Gb_34456	-0.8	-	0.18	-0.15	-0.85	-	1.08	0.71	0.83	1.84	1.44	-	0.3	-1.74	-0.93	-	-	-0.44	0.66	-0.62
Gb_35470	-	-	-	3.28	-	-	0.85	-0.08	-	-0.23	-	-	-	-	-	2.74	-	-	-	-
Gb_35705	-	-	-	-	-	-	-	4.32	-	-	-	-	-	-	-	-	-	-	-	-
Gb_36361	0.76	0.95	1.14	-0.38	0.31	0.16	-0.78	-0.02	-0.38	-0.33	-0.32	-0.65	-0.25	-0.82	-0.25	0.06	0.24	-0.66	-0.31	-0.83
Gb_36627	1.11	1.51	-	1.05	-	-0.45	0.66	0.54	-0.31	-0.45	-	-2.6	-	0.27	-	-0.36	1.46	-	1.43	-
Gb_38280	0.2	-2.8	-3.52	-1.26	-1.06	-2.34	-4.73	0.9	0.71	0.66	0.09	0.55	1.04	0.92	0.37	1.08	0.62	-0.08	-6.76	-6.46
Gb_38771	-	-10.57	-11.59	-8.44	-9.99	-2.95	-10.89	1.38	1.92	2.37	-0.22	-0.31	1.26	0.94	0.21	-1.82	-0.36	-7.64	-3.29	-7.98
Gb_38794	1.23	-	-	2.56	-	-	1.7	0.5	1.23	-	-	-	1.1	-	-	-	0.97	-	-0.64	-
Gb_39239	-	-	1.72	-	-	-	1.11	1.86	2.36	-	1.62	-	0.55	0.33	-	-	-	-	-	-
Gb_39274	-	-	-	-	-	-	4.03	1.89	-	-	-	-	-	-	-	-	-	-	-	-
Gb_39299	-	-	-	-	-	-	-	4.32	-	-	-	-	-	-	-	-	-	-	-	-
Gb_39674	0.06	-	-	-	-	-	-0.63	-0.55	-	-	-	-	-0.95	-1.48	-	2.59	2.95	-0.06	1.02	-
Gb_40407	-	-	-	-	-	2.77	-	0.07	2.22	-	-	-	1.26	-	2.35	-	-	-	-	-
Gb_40476	-0.62	-	-	3.06	-	-	0.58	-0.11	-	-	0.31	-	-	0.86	-	-	-	-	2.17	0.1
Gb_40601	-	-	-	-	-	-	4.12	1.41	-	-	-	-	-	-	-	-	-	-	-	-
Gb_41318	-	-	-	-	-	-	4.18	0.88	-	-	-	-	-	-	-	-	-	-	-	-

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.