Heatmap: Cluster_42 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule
Ovule, mature
Ovule, pollinated
Strobilus, female
Ovulate strobilus
Microstrobilus
Kernel
Leaf
Leaf, female
Leaf, male
Leaf, salicylic acid
Leaf, seedling
Leaf, truncation control
Leaf, truncation treatment
Leaf, water
Yellow-green stripe leaves
Green leaves
Stem
Cambium
Root
-0.32 -0.46 - 1.46 -0.16 - -1.05 0.48 -0.72 -0.12 0.54 - -0.39 - -1.01 1.96 -0.57 - 2.0 -2.81
-0.74 - 0.34 - - - -1.42 0.66 0.56 -0.66 -0.47 -2.78 0.63 -0.65 2.11 -0.11 0.69 - 1.43 0.56
-0.73 -0.68 -2.17 2.51 -0.5 - -1.06 -0.97 -0.44 -2.44 -1.24 -2.38 -1.52 -1.0 -1.03 0.82 0.89 - 2.22 -
-0.03 - - 2.19 - - -0.9 -0.01 -0.41 - - - - -0.63 0.12 0.49 1.52 - 2.63 -
1.1 - - 2.15 - - - 0.27 -0.46 -0.5 -0.06 - - - 2.03 1.04 0.6 -0.78 0.65 -
-0.36 - -1.92 1.39 0.23 - -1.21 0.28 0.42 -1.09 0.66 -3.87 -0.85 -0.36 1.33 0.35 -5.93 -0.96 1.94 -0.81
1.75 - - 2.54 0.56 - - -0.98 - -1.35 - - - -1.93 -0.72 1.73 -0.04 -0.72 1.09 -0.83
0.19 -0.2 - 2.51 -0.58 - -1.06 0.08 -0.27 -23.1 0.19 -2.51 -1.38 -0.75 -0.5 - - -1.13 2.33 -0.37
- - 3.03 - 3.05 - - 0.19 - - - - - - - - - - 1.27 -
0.18 - - - - - -1.32 0.22 -1.22 0.67 2.22 - -1.94 -0.87 -0.64 1.53 - - 2.65 -
-1.73 1.22 0.2 2.68 - - - -0.92 - 0.07 - - 0.42 - 0.97 2.08 - - -0.45 -
-1.7 -0.59 -1.75 2.12 -1.75 - -2.37 0.19 -2.42 -1.53 -0.25 -2.72 0.28 0.28 -0.18 1.94 -1.64 - 1.05 0.75
0.04 1.83 - - 1.02 - -1.03 -0.03 -1.18 - - - -0.86 -1.16 0.59 1.21 0.9 - 1.99 -0.32
1.07 - - - - -0.59 -1.7 0.92 - -0.16 0.04 -1.2 0.73 0.63 -1.02 0.36 0.39 - 2.68 -
- - - - - - - -1.07 1.07 - - - - 1.45 - 3.62 - - 1.28 -
0.17 -1.7 -2.87 1.42 -0.78 -0.63 -3.72 0.18 -0.05 -0.86 -2.89 -3.83 0.64 0.36 -1.48 1.36 0.56 -1.46 1.4 0.43
2.04 -4.51 -4.59 3.0 -0.75 -1.4 -0.01 -2.37 -0.61 -1.44 -0.71 -5.62 -1.16 -1.34 -1.29 -2.27 -0.22 -2.07 0.07 -1.57
-1.25 - 0.66 - -0.58 0.62 -0.34 0.68 -0.83 -1.9 - -2.21 1.38 -0.18 -1.35 0.73 -1.76 0.14 2.37 -1.94
0.52 -4.17 -3.65 3.83 -2.04 -3.44 -1.9 -2.6 -3.38 -4.53 -3.79 -3.72 -2.92 -2.95 -3.07 -1.71 -1.56 -2.32 0.91 -3.85
- - - - - - - 0.52 - - - 0.25 0.83 0.76 2.03 - 2.33 - 2.25 -
- - - - - - - 4.32 - - - - - - - - - - - -
1.06 -1.08 -0.56 -0.54 -2.15 - -1.4 0.08 -2.32 -3.05 1.03 -4.02 -1.6 -0.54 -1.39 2.98 -0.02 -2.41 -0.09 -0.8
- - - - - - - 2.72 - - - - - - - - - 3.29 1.85 -
- - - - - - - - - - - - - - - 4.32 - - - -
- - - - -0.53 - - 0.2 0.51 - -0.73 -2.41 1.16 1.12 0.24 2.31 -0.13 - 2.17 -
0.24 - -0.99 0.82 -0.83 - -0.37 -0.5 -0.46 -2.45 0.58 - 1.22 0.69 -2.17 1.64 1.01 -1.15 1.08 -2.07
-0.14 - -0.28 3.04 -2.35 - -0.04 -2.4 -0.03 1.9 - - -0.32 - -0.27 - - - 0.8 -0.68
-0.44 - - - - - -19.93 0.79 -0.17 - - - 1.54 0.13 1.98 - - - 2.23 2.01
1.69 - - - 1.07 1.27 - 0.47 1.0 0.26 - 0.68 0.8 - 0.84 - - - -0.34 0.81
- - - - - - - 1.42 0.6 - - - - 1.03 - 3.19 - - - 2.2
1.62 -2.23 -1.78 3.28 -0.69 -2.61 -1.14 -1.84 -1.76 -3.63 -1.42 -4.26 -1.24 -1.84 -1.76 -0.83 -1.24 -1.23 0.31 -0.4
2.68 - 1.9 - - - - 0.58 - - 2.45 - - - 1.34 - - - -1.38 -
0.63 - - - - - - 0.49 - -15.57 - - 1.28 1.06 - 1.78 - - 2.43 1.88
2.44 - 0.41 2.12 - - 0.76 -0.34 - -0.44 - - - -1.09 0.22 0.7 0.52 - -0.04 -
0.56 1.94 - 2.17 - - -1.51 -0.56 -1.6 -1.62 -0.55 - -2.1 1.14 -0.75 1.78 -0.7 - -0.41 -
1.58 -2.74 -1.51 3.6 -1.27 -3.56 -0.19 -2.83 -3.61 -3.7 -2.37 -2.9 -1.76 -2.18 -3.51 -1.05 -2.38 -3.08 -0.12 -3.77
-0.76 - -0.96 2.47 -0.19 -1.52 -1.37 -0.01 -1.12 - -1.15 - -1.67 - -1.79 2.1 -1.75 - 2.13 -1.97
1.96 -1.97 -1.49 3.12 -1.21 -1.38 0.06 -2.06 -2.72 -3.23 -1.52 -3.86 -1.18 -1.5 -1.89 -0.22 -1.03 -1.86 0.17 -2.26
-0.51 0.35 -0.57 0.89 -1.29 -0.89 -0.83 0.1 -0.58 -0.57 0.3 -2.97 0.61 -0.19 0.87 1.02 -0.22 -0.62 0.67 -0.22
- - - - - - - - - - - - - - - - - - 4.32 -
2.68 - - - - - - 0.62 - - - - - 2.2 - - - - 2.9 -
0.22 3.01 - 1.97 - - - -0.15 -1.63 - - -1.71 - - - 0.83 - -0.15 1.41 -
1.73 -5.86 -5.73 3.21 -0.88 -2.32 -0.66 -2.58 -2.1 -2.46 -2.06 -4.91 -1.38 -1.43 -1.55 -3.19 -1.76 -2.42 1.72 -2.26
-0.48 - - 3.31 - - -0.41 -1.02 - -3.86 -1.69 - - - - -0.18 - -1.72 2.3 0.74
0.03 - - 2.61 - - 0.89 0.78 - - - - 1.33 1.18 - - - - 2.17 -
-0.6 - - 3.02 - - - 0.14 - - 0.03 - -0.27 - -0.19 1.34 - - 1.97 -0.05
- - - 2.46 -0.25 2.09 -1.1 2.07 -1.83 0.01 - -2.03 -0.59 - -0.47 - - 0.64 -1.86 -
1.69 -2.46 -1.53 3.42 -1.41 -2.75 -0.46 -2.23 -2.64 -3.75 -1.61 -3.18 -1.83 -2.03 -2.14 -0.45 -0.55 -2.82 -0.25 -2.0
0.82 - - 2.45 0.16 - 0.05 0.86 - - - - - - 1.56 - - - 2.55 -
1.61 - 0.4 1.61 1.3 0.56 -0.41 -1.33 -2.26 -2.47 -1.16 -2.28 -1.22 -1.16 -0.21 -1.17 -0.46 -1.78 1.64 -2.93
2.21 - 0.4 - - -0.85 - 0.99 -1.47 -0.83 1.42 -1.05 -0.15 0.94 - - 0.17 - 1.16 0.34
- - - - - - - 4.32 - - - - - - - - - - - -
0.9 - - 2.0 - - - 0.45 - -1.55 0.44 - -1.28 -1.94 - 1.41 - - 2.95 -
- - - - - - - 1.52 0.92 - - - 1.42 - - - - - 3.65 -
0.64 - - - - - - 0.38 1.23 -0.31 -0.89 -3.12 1.23 1.28 -0.09 2.14 - - 1.48 -1.26
- 2.33 - - - - - -0.87 -2.04 - - - - - 1.94 - - 1.75 2.8 -
0.15 - 1.21 - - 0.26 1.45 0.46 - 0.61 - -1.88 -0.12 -1.44 1.75 - - - 1.99 -0.23
- 3.09 - - - - - 0.85 - - - -0.03 - - - 2.21 - - 2.03 -
- 2.24 1.14 2.24 0.09 - - -0.73 - - - - - - - 2.46 - - 0.21 -
0.24 - -2.05 1.19 -1.89 -1.85 - 0.1 -1.14 -1.88 0.63 - -1.32 -0.27 0.22 2.39 -0.55 -2.09 1.94 -
-0.58 - 0.56 - 0.5 - 3.29 -0.54 - -0.44 0.31 - -0.98 -1.09 0.22 - 0.91 - - -
-0.18 -0.66 -1.54 2.72 -1.2 0.03 -2.49 -0.75 -1.38 - -0.44 -4.72 -0.2 -0.47 -0.83 -0.37 -1.21 -0.42 2.01 -
1.26 -2.43 -0.38 2.76 -0.12 - -1.84 -1.89 -4.3 - - -4.11 -1.27 -2.02 -0.61 -0.28 -1.54 -3.64 2.52 -
-4.12 - - 4.12 - -2.6 -2.75 -2.86 - -4.45 -2.77 -5.33 -3.34 -2.18 - -1.92 -2.64 -16.18 0.08 -4.11
1.74 - - - - 1.86 -0.63 0.8 0.96 - - - -0.29 - 1.58 - - - 2.3 -
- - - 2.77 - - - 0.53 0.04 0.17 0.32 -0.17 - -0.1 - - - - 2.7 -
- - - - 4.32 - - - - - - - - - - - - - - -
- - - - 0.51 - -0.63 -0.48 - - 0.38 - - -1.02 - 3.24 1.71 - 1.44 -
-0.43 - - 1.66 - - -1.69 0.17 -1.39 -0.05 0.41 -3.82 0.81 0.78 -2.03 1.89 0.92 - 0.87 -0.35
2.11 -1.76 -1.71 2.91 -0.49 -1.4 -0.42 -1.86 -2.63 -2.8 -1.12 -4.07 -0.89 -0.99 -1.45 -0.46 -0.76 -1.23 0.3 -1.91
1.78 - -2.18 0.53 -0.5 - -0.32 -0.59 -1.27 -0.34 -0.22 -1.75 -1.16 -2.57 -1.98 1.77 0.81 -0.31 1.65 -1.34
0.1 0.97 -0.19 - 1.59 - - 0.45 -0.23 -0.04 1.34 -1.97 - - 0.63 0.32 - 1.64 0.26 -
- - - - 1.46 - 0.42 0.59 - - - -0.93 1.94 0.09 - - - - 3.17 -
0.46 -0.57 0.58 2.78 1.11 -1.4 -0.08 -1.69 -0.68 -2.55 - -3.68 -1.91 -3.13 -0.32 1.28 -1.24 - -0.7 -1.83
2.47 -1.28 -3.77 2.55 -0.29 -1.69 -0.7 -1.8 -2.87 -4.09 -0.72 -3.16 -0.47 -1.04 -0.92 0.08 -0.89 -1.99 0.33 -1.61
-0.02 -0.4 0.43 1.45 - -1.69 - 0.07 0.14 0.54 -0.93 -3.67 1.16 0.0 1.16 0.32 -0.39 - 1.13 -
-1.12 - -1.0 - -0.78 -5.46 - 0.82 -0.06 -2.34 0.73 0.96 -0.42 0.19 0.26 1.98 -0.04 - 1.96 -
2.19 -2.37 -1.41 3.07 -1.66 -1.93 -0.47 -2.03 -2.57 -3.16 -1.74 -2.29 -1.79 -1.68 -1.92 0.1 -0.15 -2.38 -0.11 -2.25
- - - - 1.9 2.1 2.28 -2.22 - - 1.86 - - - - - - 1.72 - -
0.79 1.32 - - 1.24 - - 0.09 -0.12 -0.98 - - 0.56 -1.31 0.06 1.85 0.86 - 1.19 -1.78
-0.37 -1.05 -1.21 -0.34 -0.13 - -1.87 0.08 -0.42 -0.45 -0.24 - 0.76 0.52 0.75 2.05 1.01 -1.26 0.28 -1.51
1.29 -0.95 - 2.63 - - -0.54 -0.12 -1.38 -1.11 0.86 - 0.56 -0.14 -2.43 1.04 -0.92 - 0.52 -
0.1 1.5 0.49 1.19 - - -0.56 -0.42 - - 0.0 -1.48 -1.68 -0.41 - 2.72 -0.01 - -0.01 -
0.89 - - - 1.77 0.48 -1.49 0.25 -2.62 -1.44 -0.81 -0.04 -1.89 - -0.95 1.78 - 0.16 2.13 -
0.46 - -0.18 2.73 0.12 - - 0.62 -0.21 - - - -2.2 -1.16 0.36 0.25 -0.01 -1.21 0.92 0.25
-0.12 - 0.0 1.56 - - -0.84 0.93 -1.68 -1.0 2.66 -1.1 -1.48 -0.65 -0.23 1.55 - - -1.75 -
1.19 - - 3.18 -0.45 - - -0.87 - -1.48 0.56 -2.4 - - -0.81 0.08 0.32 - 1.31 -
- - - - - - - -0.0 1.49 - - - - - - 3.21 - - 2.79 -
1.56 - - - - - 1.27 -0.22 - - 0.91 -0.85 - 1.05 1.74 1.22 - - 1.05 0.63
- - - 3.96 - - - -0.1 - - - - - - - - - - 1.82 -
- - - - - - - 4.32 - - - - - - - - - - - -
- - -1.53 - - - - -0.13 -0.15 - - -1.09 1.17 - 1.12 2.96 - - 2.37 -
- - - - - - - 1.01 - 1.42 - - - - - 2.86 - - 1.95 2.07
-0.22 - -2.78 2.55 -0.39 -2.57 -1.4 -1.0 -0.17 -1.68 0.73 - 0.7 0.25 -0.15 1.0 -0.51 -1.96 0.72 -3.03
1.6 - -0.63 2.12 -0.47 - -1.48 -0.09 -2.2 -1.44 - -1.41 0.86 - - 0.07 2.05 0.19 -0.21 -
0.25 - - 2.33 - - 0.41 0.18 - -1.17 -0.14 -2.21 0.84 0.69 - 1.73 - -0.6 1.25 -
-0.26 0.17 - 2.51 -0.99 - -1.85 -0.36 -2.55 - -0.79 - -0.73 0.04 - 1.29 1.1 -0.37 1.4 -1.29
0.12 - - 1.78 - - 1.82 -0.82 -1.5 0.26 0.04 - 0.6 -0.79 0.88 -0.23 - - 1.63 -0.11
-2.68 - - - - - - 0.98 -0.88 0.36 1.15 - -0.97 0.73 - - 1.84 -0.12 2.84 -
- - 0.14 1.99 0.3 - -0.48 -0.5 -1.6 - - -1.83 0.35 -0.97 2.06 0.95 0.64 - 0.23 0.05
- - - - - - - -0.91 - - - - - 3.32 - - - - 3.24 -
0.92 -0.15 - 3.1 -0.18 - -1.42 0.1 -1.31 -2.12 0.18 -3.26 0.68 -1.5 -1.5 - - -1.47 0.83 -
- - - 0.69 - - - -0.27 - -0.73 1.8 -1.29 -0.2 -1.39 0.38 2.11 0.99 - 2.08 -
- - - 2.54 -9.06 - 1.07 -1.4 -0.87 - - - 0.54 - - 2.15 - - 2.4 -
1.82 -2.27 -2.59 3.4 -2.14 -2.59 -0.8 -2.74 -3.96 -4.63 -1.5 -3.81 -1.91 -2.03 -2.88 0.08 -0.32 -2.17 -0.09 -2.45
- - - - - - - - - - - - - - - - - - - -
3.07 - - - - - - - - - - - - - - - 3.53 - - -
- - - - 1.97 - - -0.01 -0.88 - - - 0.46 0.77 0.59 1.79 - - 2.7 -
- 1.95 - - 2.68 1.47 - - - 1.93 - 0.93 - 0.34 - - - - - -
0.63 - -13.9 1.15 0.35 - -0.47 0.48 -2.68 -1.06 -11.69 -3.19 0.52 -1.56 1.26 0.83 1.21 -10.24 1.68 -0.66
- 1.3 - - - - -0.56 -0.77 0.42 -0.67 1.07 -0.67 1.61 1.99 -0.05 1.04 - 0.09 -1.08 -
-0.69 - - 3.2 - - -2.25 -0.43 -1.69 - - - - -3.23 - 3.03 - - -0.69 -
0.77 - 1.75 - 1.26 0.37 - 0.66 - - 0.13 - - - 0.06 - 0.7 -0.01 2.29 -
- - - - - - - - - - - - - - - - - - - -
- - - - 1.18 - - - - 0.86 2.69 1.37 - - - - - - 0.55 2.44
0.16 -0.28 -0.3 2.58 -1.35 - - -0.66 -1.71 -1.25 -0.54 - -0.05 -1.29 0.68 1.58 -1.33 - 1.29 -
1.15 - 0.31 1.17 - - -0.5 0.17 0.22 - 0.99 - 0.43 - 1.12 1.16 - - 1.83 -
0.26 0.53 0.95 1.49 - - -1.39 -0.01 -0.81 -1.41 0.71 - -0.18 -0.4 0.42 1.61 -0.09 -1.33 -0.13 -1.37
1.0 - -3.75 3.41 -1.84 -2.51 -1.03 -2.89 -3.18 -3.02 -2.49 -3.79 -1.64 -1.59 -2.79 -0.04 -0.28 -3.55 1.54 -2.52
2.11 -1.6 -1.51 2.87 -0.73 -1.81 -0.16 -1.94 -2.2 -2.76 -1.55 -4.66 -1.1 -1.19 -1.49 0.05 -0.27 -1.97 0.19 -1.33
- - - - - 1.51 - 0.94 - - 1.27 -0.63 - - 1.5 - 1.43 - 2.73 -
-1.14 - - 2.66 -0.06 - - 0.03 - - -0.2 -2.13 -0.32 -0.62 -0.38 2.3 - - 1.12 -0.24
0.75 -0.59 -1.82 1.98 0.56 -3.21 -0.96 -0.03 -1.66 -0.63 -1.48 -5.38 -0.04 -0.99 -0.35 0.71 -0.36 -0.66 1.69 -1.14
-1.85 0.28 -0.73 2.26 - -0.68 - 0.19 -0.18 - 0.09 - -2.27 - 1.39 1.33 -0.6 - 0.89 0.63
-1.26 - -0.3 2.41 - - -0.92 -1.2 0.62 - 2.23 -2.25 - - 1.17 0.99 0.2 - - -0.56
- - - 2.89 - - - -3.29 - 1.03 - - - 1.12 2.35 - 1.34 - -0.63 -
-0.48 - - 1.16 -2.18 -1.98 -1.31 0.04 -3.52 -0.2 1.12 -2.49 1.49 0.67 1.55 1.0 -1.86 - -0.36 0.53
-0.98 1.02 -1.12 2.89 -0.98 - -0.0 -0.47 -1.42 -0.37 - - - - - 1.02 -0.64 -1.19 1.64 -
- - - - - - - 4.32 - - - - - - - - - - - -
0.72 -1.26 -1.5 3.53 -1.56 -1.02 0.04 -2.29 -2.09 -3.42 -1.44 -4.96 -2.47 -2.42 -3.83 -1.15 -2.45 -1.87 0.68 -1.96
- 2.09 - 2.63 - - - -0.4 -0.62 - 0.88 0.97 -0.46 - - 1.21 - - 0.38 -
1.99 - - - -2.84 - 1.04 -0.52 -2.12 -5.45 -0.2 - - -0.66 - 1.13 - -23.46 3.07 -0.36
-1.46 - - 3.84 - - - -0.15 -3.33 - - - -0.52 -0.75 - - - - 1.62 -
- - - 2.66 - - -6.43 -0.71 - 2.1 - - - - - 2.88 - - 0.52 -
1.56 - - - - - - 0.77 1.02 - - - - 2.13 - - - 1.58 2.57 -
1.18 - 1.94 - - - - 1.09 0.45 - - - - - - - - - 3.38 -
1.35 0.12 -1.05 - 0.14 - -1.68 -0.59 - - - - -2.38 -2.55 0.47 1.65 0.33 -0.83 2.5 0.51

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.