Heatmap: Cluster_218 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	Ovule	Ovule, mature	Ovule, pollinated	Strobilus, female	Ovulate strobilus	Microstrobilus	Kernel	Leaf	Leaf, female	Leaf, male	Leaf, salicylic acid	Leaf, seedling	Leaf, truncation control	Leaf, truncation treatment	Leaf, water	Yellow-green stripe leaves	Green leaves	Stem	Cambium	Root
Gb_00622	-1.17	-0.84	-1.39	-0.4	-0.54	1.65	-0.15	0.15	-1.26	-1.0	-0.56	0.27	-0.04	-0.13	-0.65	-0.46	-0.6	1.05	0.81	0.57
Gb_00923	-7.48	-	-6.24	-0.57	-0.42	-0.02	-8.88	0.71	0.77	0.97	0.09	-1.38	1.83	0.52	0.58	-2.63	-2.38	1.29	0.39	-2.06
Gb_01100	-3.41	-0.25	-2.66	-3.33	-0.35	-4.04	-1.95	0.48	0.62	0.9	0.71	-0.36	0.63	-0.25	1.07	1.01	-0.09	-0.48	0.63	-0.35
Gb_01101	-2.78	0.2	-4.99	-	-0.64	-4.93	-2.55	0.14	0.5	0.76	1.35	-0.38	0.25	-0.53	1.67	0.32	-0.04	-0.92	-0.05	0.6
Gb_01951	0.61	-0.43	-1.22	0.56	0.48	1.23	0.25	0.17	-0.54	-0.51	-0.45	-1.02	-0.19	-0.65	-0.64	-0.88	-1.02	0.83	0.46	-0.33
Gb_02323	0.54	1.98	-0.0	-0.27	1.26	0.5	-1.4	-0.26	-0.89	-1.37	-1.22	-0.44	-0.28	-0.36	-1.06	-1.2	-2.12	0.54	0.06	-1.25
Gb_03426	-8.2	-	-	-1.03	-0.5	-0.67	-	0.75	0.88	1.06	0.21	-0.88	1.61	0.55	0.64	-1.7	-1.81	1.33	0.54	-2.13
Gb_03476	-0.36	-0.59	-0.88	-0.29	-0.72	-0.9	-0.78	0.21	0.13	-0.07	1.22	-0.23	-0.07	-0.48	1.06	0.13	-0.27	-0.58	0.6	0.3
Gb_05042	-1.93	-1.38	-1.78	-0.79	0.18	1.03	-1.8	0.79	0.45	-0.18	0.8	-0.53	0.21	-0.04	1.18	0.26	-0.3	-0.46	-1.4	0.13
Gb_05868	0.17	-0.46	-0.45	-0.38	-0.6	-0.46	-0.42	0.05	0.21	0.09	0.82	-0.59	0.46	0.22	0.84	0.54	0.22	-0.97	-0.74	-0.4
Gb_06052	-2.2	-2.57	-3.61	0.44	0.3	0.46	-8.6	0.88	0.44	0.32	0.49	-0.76	-0.1	-0.56	0.44	0.02	-0.52	1.2	0.92	-1.92
Gb_06213	-0.86	0.06	-0.6	-0.8	-0.23	-0.84	-0.55	0.18	0.23	0.1	0.56	-0.49	0.34	0.17	0.56	0.66	0.34	0.14	-0.17	-0.31
Gb_06394	-0.91	-2.39	-0.87	-1.46	-1.11	-4.01	-1.78	0.09	0.91	0.79	1.31	-0.21	-1.24	-0.76	1.29	0.82	0.65	-1.72	0.53	0.02
Gb_06474	0.68	0.7	0.41	-0.01	0.59	-0.8	-2.1	0.06	-0.33	-0.12	0.18	-0.52	0.14	-0.2	0.04	-1.34	-1.39	0.4	0.91	-0.83
Gb_06776	-0.14	0.83	0.47	-0.45	-0.12	0.32	-0.41	0.34	-0.09	0.25	-0.13	0.35	-1.7	-2.1	-0.24	-0.93	0.07	0.42	0.94	-1.08
Gb_07177	1.57	0.72	0.26	0.69	0.98	0.71	-1.37	0.54	-1.0	-1.14	-0.92	-0.21	-0.99	-1.34	-1.16	-1.56	-0.79	-0.49	0.37	-1.01
Gb_08282	-1.4	-1.93	-4.7	-1.77	-1.56	0.5	-0.88	0.49	-0.48	0.17	-0.37	-1.22	0.56	-0.15	-0.09	-1.35	-1.3	1.05	1.58	1.63
Gb_08541	0.21	0.42	-1.16	-0.04	0.69	0.48	-2.47	0.31	0.13	0.07	0.11	-0.54	0.55	0.09	0.13	-0.78	-0.62	0.6	0.11	-1.81
Gb_08566	-2.62	-6.44	-2.88	-4.31	-4.03	-4.6	-3.41	0.21	0.8	0.38	1.73	-0.07	-0.06	-0.13	1.74	0.94	1.32	-2.12	-0.6	-1.08
Gb_08769	-0.48	-	-1.44	-2.12	-0.76	2.17	-0.39	-1.74	-0.34	-0.54	1.37	-0.75	-3.59	-3.74	1.81	-0.87	1.08	-1.33	-3.0	0.04
Gb_08776	0.06	-0.12	-0.67	-0.61	-0.74	0.32	0.95	1.09	-0.92	-0.6	-0.5	-1.94	-0.14	-0.35	-0.86	-1.09	-0.57	1.54	0.41	0.09
Gb_09571	-0.74	-1.21	-1.49	-0.39	-0.19	-1.78	-1.15	0.14	0.3	0.26	0.89	0.06	-0.23	0.03	1.06	-1.1	-0.5	0.13	0.84	0.85
Gb_09717	-2.41	-1.44	-2.06	-1.81	-1.05	0.19	-1.8	0.39	0.2	0.35	1.62	-0.59	-0.0	-0.3	1.57	-0.78	-0.11	0.29	0.14	-0.13
Gb_09877	0.55	0.51	0.42	0.47	0.8	-0.86	-0.19	0.35	-1.31	-1.04	-0.63	-0.73	0.78	0.77	-0.86	-1.13	-0.89	0.14	0.17	-0.68
Gb_10394	0.4	1.61	-0.6	0.27	0.69	-1.37	-2.78	0.32	-0.13	-0.26	-0.42	-0.04	0.39	-0.13	-0.25	-1.43	-1.79	0.15	0.68	-1.14
Gb_10484	-1.06	-0.93	-1.39	-0.29	-0.15	0.95	-0.27	0.23	-0.1	-0.04	0.6	-0.29	0.68	0.36	0.68	-0.64	-0.11	-0.12	0.17	-0.65
Gb_11203	0.66	0.41	0.42	0.49	0.94	0.14	-1.64	0.14	-0.8	-0.99	-0.07	-1.03	-0.35	-1.03	0.21	-1.33	-2.57	0.38	1.18	-0.27
Gb_11371	-0.65	-1.07	-0.97	-0.65	-0.54	-1.2	-0.95	0.62	0.44	0.22	1.25	-0.36	0.14	-0.08	1.11	0.31	0.32	-0.86	-0.27	-0.29
Gb_11649	0.94	-0.28	0.29	0.73	0.82	-0.33	-0.65	-0.03	-0.62	-0.77	-0.2	-0.73	-0.55	-0.86	-0.35	-1.45	-0.27	0.29	1.09	-0.11
Gb_11659	-0.51	0.0	-0.45	0.07	-0.02	0.64	-0.63	0.13	-0.14	0.12	0.39	-0.18	-0.72	-1.15	0.53	-0.32	-0.29	0.28	0.67	0.17
Gb_13083	-0.52	-0.83	-1.45	-1.26	0.27	1.67	-1.92	0.33	-0.13	-0.0	0.56	-0.32	-0.1	-0.29	0.7	-0.43	-0.34	0.41	-0.65	-0.03
Gb_13225	-0.6	-0.98	-1.02	-0.66	-0.13	1.68	-2.34	0.44	-0.34	-0.29	0.81	-0.16	-0.53	-0.77	1.0	0.01	0.06	-0.24	-0.17	-0.52
Gb_14214	-0.85	-0.78	-1.06	-0.31	0.24	-0.63	-0.57	0.23	-0.03	-0.2	0.51	-0.1	0.43	0.35	0.48	-0.94	-0.27	-0.33	1.51	-0.56
Gb_14642	-2.01	-1.71	-3.46	-1.53	-0.16	2.09	-0.82	0.3	-0.55	-0.77	0.62	-0.38	-0.37	-0.9	0.62	-0.42	-1.08	0.45	0.42	0.79
Gb_14644	-2.25	-1.77	-2.88	-1.23	-0.73	2.4	-1.76	0.43	-0.83	-1.03	0.4	-0.76	-0.16	-0.86	0.15	-0.65	-0.37	0.43	0.8	0.46
Gb_14969	-0.92	-1.39	-2.41	-	-2.56	2.59	-	0.55	-0.94	0.35	0.55	-1.97	-1.92	-0.53	1.04	-	-	0.66	-0.48	1.27
Gb_15326	-0.41	-1.97	-0.8	-1.14	-0.59	2.25	-0.45	0.14	-0.81	-0.82	0.53	-0.46	0.2	-0.22	0.31	-2.78	-1.09	-0.72	0.97	-0.0
Gb_15512	-0.35	-0.56	-0.89	-0.27	0.23	1.12	-2.26	0.42	-0.28	-0.65	0.73	0.18	-0.8	-0.84	0.77	0.43	-0.24	0.57	-0.72	-0.14
Gb_16293	-2.68	-	-5.16	-	-2.09	2.92	-7.71	-0.37	-1.83	-0.98	1.84	-1.62	-1.57	-1.8	1.61	-	-3.6	-2.26	-4.46	1.33
Gb_16324	1.89	-2.02	-1.78	-3.42	-2.26	2.19	-	0.33	-0.56	0.35	-0.08	-3.54	-1.35	-0.81	0.63	-4.42	-4.16	0.41	0.29	0.57
Gb_16325	-0.5	-0.6	-1.73	-1.59	-1.32	2.8	-2.89	0.47	-0.34	0.51	-0.23	-4.14	-1.34	-1.02	0.56	-3.06	-3.15	0.03	0.28	0.2
Gb_16358	2.05	-1.01	-0.57	-14.22	0.99	1.13	-0.9	-0.4	-0.17	0.02	-	-2.54	-0.86	-1.76	-	-0.73	-0.05	1.33	-2.88	1.05
Gb_16881	-0.7	-0.58	-0.81	-0.5	-0.34	-0.42	-1.18	0.25	0.2	0.04	1.18	-0.15	-0.01	-0.12	1.24	0.38	-0.04	-0.27	-0.37	-0.38
Gb_19684	-0.47	-0.27	-1.0	-0.02	-0.01	0.05	-3.42	0.33	-0.16	-0.03	0.94	-0.46	-0.92	-1.34	1.15	-0.16	-0.17	1.2	-0.17	-0.08
Gb_20895	0.21	-0.23	-0.29	0.31	0.02	-0.82	-0.66	0.18	0.33	0.17	0.47	-0.23	0.02	-0.14	0.34	-0.16	0.18	-0.24	0.19	-0.36
Gb_22251	-0.54	-0.27	-0.85	-1.05	-0.75	-0.16	-0.78	0.23	-0.28	-0.07	1.13	-0.11	-0.37	-0.31	0.97	0.09	0.36	0.33	0.18	0.03
Gb_22319	-0.11	0.01	0.05	-0.33	-0.21	0.16	-2.34	0.14	0.16	-0.19	1.28	-0.4	-1.7	-1.41	1.35	0.29	0.51	-0.83	-0.39	-0.8
Gb_22320	-0.24	-0.33	-0.93	-0.16	-0.14	1.46	-1.52	0.26	-0.36	-0.8	0.8	0.0	-1.64	-1.44	0.87	0.03	0.07	-0.75	0.56	-0.02
Gb_23285	-0.33	-0.55	-1.0	-0.59	0.21	0.62	0.48	-0.48	-0.11	-0.29	0.95	-0.56	-0.79	-0.47	0.83	-0.54	-1.24	0.63	0.7	-0.25
Gb_23330	-3.43	-2.72	-3.86	-1.49	-0.42	1.79	-0.29	-0.19	-0.44	-0.37	1.13	0.33	-0.24	-0.32	1.17	-0.26	-0.35	-0.51	-1.56	0.94
Gb_23340	-2.83	-2.14	-3.13	-1.71	-0.22	1.99	-0.28	-0.21	-0.12	-0.3	0.45	0.64	-0.38	-0.56	0.34	-0.05	-0.1	-0.45	-0.59	1.02
Gb_23646	-0.55	-0.62	-1.3	-0.47	-0.72	-0.87	-1.67	0.81	0.28	0.16	0.82	-0.11	0.37	0.03	0.61	0.01	0.14	0.81	-0.27	-0.41
Gb_23736	0.26	-0.64	-0.19	0.48	0.31	0.26	-1.69	0.41	-1.0	-0.95	-0.26	-0.41	0.52	0.09	-0.14	-1.0	-0.79	0.04	1.34	0.21
Gb_24472	1.14	0.39	0.53	0.24	1.35	0.06	-1.49	-0.54	0.5	0.37	-2.09	-1.83	-0.49	-0.67	-1.29	-0.86	-0.8	0.93	-	0.3
Gb_24983	-0.8	-0.75	-1.7	-0.31	0.06	0.27	-0.66	0.59	0.31	0.28	1.08	0.22	-0.3	-0.2	0.89	-0.97	-1.27	-0.57	0.35	0.25
Gb_25658	0.3	0.9	0.76	0.21	0.4	0.18	-0.51	1.15	0.37	-0.54	-0.29	-0.26	-1.05	-1.39	-1.0	-0.78	-1.25	-1.03	0.54	-0.45
Gb_26173	0.4	-0.32	-0.66	-0.34	0.33	0.82	-0.06	0.27	-0.31	-0.27	0.51	-0.77	-1.18	-1.5	0.46	-0.71	-0.74	0.31	0.92	0.16
Gb_26204	-0.19	-	-0.71	1.92	-1.01	-1.61	-3.17	1.41	0.94	0.39	-1.47	-2.76	-1.68	-2.31	-1.04	-0.58	-	0.01	2.16	-2.01
Gb_26979	-0.39	0.17	-0.35	-0.29	-0.14	-1.54	-1.1	0.3	0.3	0.23	0.89	-0.28	0.3	0.04	0.86	0.2	0.11	-0.82	-0.05	-0.66
Gb_27326	-0.83	-1.42	-1.8	-0.65	-0.78	1.56	0.37	0.32	-0.76	-0.65	0.81	-0.56	0.72	0.06	0.35	-1.42	-0.97	-0.18	0.74	0.0
Gb_27597	-0.56	0.54	-1.46	-2.01	-0.53	1.47	-3.89	0.37	0.16	0.0	0.37	-0.24	0.79	0.9	0.11	-1.37	-2.6	1.07	-0.36	-3.99
Gb_27637	-0.09	-0.38	-0.11	-0.01	0.07	0.14	-2.72	0.39	-0.42	-0.3	1.18	-0.74	-1.3	-1.13	1.42	-0.05	-0.36	-0.59	0.95	-1.11
Gb_27731	0.95	-0.88	-0.94	-0.85	0.13	0.66	-2.31	0.51	0.12	0.18	0.15	-0.44	0.61	0.3	0.17	-0.37	0.02	0.4	-1.83	-0.3
Gb_28227	0.48	0.57	1.2	0.62	0.66	0.28	-0.32	-0.18	-0.45	-0.6	-1.32	-1.24	0.37	0.29	-1.15	-1.58	-0.99	-0.0	-0.46	0.08
Gb_28483	-1.16	-2.73	-3.54	-1.32	0.39	-0.5	-2.95	0.41	0.26	-0.23	0.32	0.08	-0.24	0.19	0.48	0.05	-0.29	0.6	1.77	-0.14
Gb_28850	0.23	2.04	0.03	0.45	0.82	-0.5	-1.34	0.16	-0.97	-0.98	-1.2	-0.35	0.59	0.01	-1.31	-3.87	-2.3	0.27	0.39	-1.34
Gb_29017	0.63	0.0	0.44	0.33	0.41	-0.76	-0.9	-0.3	0.03	-0.06	-0.27	-0.19	-0.32	-0.33	-0.39	0.06	0.17	0.13	-0.44	0.62
Gb_30271	1.17	1.06	1.5	0.71	1.3	-3.08	-1.92	-1.31	-0.53	-0.35	-0.14	-1.32	-2.61	-3.36	-0.03	-0.98	-1.63	-1.04	-3.4	1.33
Gb_30658	0.05	-0.35	-0.52	-0.24	0.37	-0.1	-1.05	0.3	-0.59	-0.68	0.23	-0.42	0.14	-0.43	0.21	-0.93	0.29	0.07	1.26	0.38
Gb_31867	0.44	-	-	-	-2.28	2.86	-	-1.55	-1.5	-	-	-4.23	-	-1.09	-	-	0.69	-0.39	0.72	2.57
Gb_32616	0.99	0.72	0.56	0.77	1.22	0.91	-1.75	-0.44	-0.56	-0.75	-1.42	-0.65	-0.08	-0.24	-1.61	-1.19	-1.53	0.52	-1.32	-0.12
Gb_32623	0.41	0.72	0.19	0.42	1.12	0.86	-1.18	0.08	-0.74	-0.97	-0.16	-0.22	0.04	-0.2	-0.12	-1.4	-1.85	0.52	-0.82	-0.47
Gb_33944	-0.23	-0.25	-0.58	0.16	0.48	0.62	-0.79	0.26	-0.75	-0.79	0.66	-0.14	-0.02	-0.16	0.63	-1.02	-0.41	0.34	0.62	-0.54
Gb_35081	-0.98	-1.82	-2.52	-1.61	-0.75	0.98	-0.26	0.76	-0.12	0.53	1.2	-0.07	-0.63	-1.45	0.98	-0.11	-0.01	0.15	0.49	-0.8
Gb_35146	-0.3	1.56	-	-1.35	-2.0	2.16	-0.5	0.46	-1.37	-2.53	0.24	0.29	-0.22	0.09	0.07	-0.95	-2.24	-0.14	-0.27	-0.64
Gb_35180	1.15	0.45	0.1	0.87	0.79	-0.08	-1.5	0.16	-0.1	-0.39	-1.88	-0.41	-0.45	-0.49	-1.98	-1.42	-1.56	1.2	-0.9	0.48
Gb_35951	-4.47	-	-	-1.35	-0.56	0.65	-	0.59	-0.96	0.1	-0.7	1.72	-3.26	-2.37	-1.19	-	0.65	0.67	-0.0	2.44
Gb_36088	-	-	-	-	-	-	-	1.03	-	-	-	-	-	-	-	-	-	-	-	4.17
Gb_36166	0.64	0.13	-0.52	-0.17	0.15	-0.3	-1.0	0.45	0.06	-0.06	-0.11	-0.73	0.87	0.48	-0.03	-0.98	-1.18	0.1	0.79	-1.01
Gb_36649	0.37	-0.44	0.08	0.21	0.34	-0.25	-1.08	0.28	-0.31	-0.46	0.32	-0.57	0.08	-0.1	0.22	0.01	-0.56	0.21	0.48	0.14
Gb_36764	-0.59	-0.39	-1.14	-0.33	0.1	-1.27	-1.57	0.08	0.3	0.13	0.58	-0.45	0.63	0.38	0.6	-0.0	-0.82	-0.32	0.33	0.93
Gb_36765	-0.54	0.13	-0.87	-0.14	0.1	-0.89	-1.73	0.22	0.09	-0.1	0.81	-0.36	-0.4	-0.68	0.9	-0.09	-0.77	-0.03	0.67	0.84
Gb_36824	0.2	0.26	0.06	-0.04	0.48	-0.24	-0.78	0.31	-0.66	-0.68	0.54	-0.31	-0.03	-0.19	0.53	-0.44	-0.54	0.2	0.31	-0.09
Gb_37244	-0.04	-0.55	-0.32	-0.34	0.05	0.45	0.5	0.17	-0.31	-0.44	0.07	-0.27	0.13	0.06	0.13	-0.68	-0.26	0.28	0.17	0.44
Gb_37635	-0.27	0.46	0.04	-0.38	-0.07	1.82	0.24	0.27	-0.81	-0.61	0.2	-0.53	0.28	0.21	0.54	-2.42	-1.49	-1.21	-0.66	-0.66
Gb_37853	0.14	-0.1	-0.25	-0.06	0.35	-0.24	-0.96	0.37	-0.24	-0.31	0.41	-0.74	0.25	-0.2	0.33	-0.44	-0.89	0.3	1.03	-0.36
Gb_38115	0.49	1.53	0.55	0.0	0.67	-2.48	-1.62	-0.95	-0.19	0.1	-0.06	0.03	-1.31	-1.0	-0.14	-0.68	-0.34	-0.73	-1.88	1.38
Gb_38642	0.45	0.56	0.08	0.14	-0.05	-0.18	-2.37	0.73	-0.16	-0.21	-0.82	-1.53	0.65	-0.01	-0.49	0.05	0.32	0.32	0.34	-0.85
Gb_38753	0.4	0.17	-0.04	-0.36	-0.39	0.17	-0.68	0.27	-0.11	-0.38	0.32	-0.19	0.04	-0.51	0.4	-0.49	-0.62	0.55	0.35	0.16
Gb_39396	-	-	-	-	-	-3.0	-0.57	0.52	1.23	1.06	1.03	-0.31	-0.07	-0.11	1.38	-0.02	-0.19	1.21	0.69	-2.18
Gb_41062	-1.55	-1.75	-1.99	-0.3	0.11	1.74	-2.07	-0.08	0.1	-0.04	0.32	-0.06	0.24	0.39	0.7	-0.36	-0.33	-0.25	-0.86	0.46
Gb_41606	0.11	-1.14	-0.87	-0.2	-1.3	2.53	-0.8	0.15	0.06	0.4	-0.27	-0.22	-0.58	-0.96	-0.47	0.11	0.44	-2.1	-2.68	-1.26

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.