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Heatmap: Cluster_50 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Ovule
Ovule, mature
Ovule, pollinated
Strobilus, female
Ovulate strobilus
Microstrobilus
Kernel
Leaf
Leaf, female
Leaf, male
Leaf, salicylic acid
Leaf, seedling
Leaf, truncation control
Leaf, truncation treatment
Leaf, water
Yellow-green stripe leaves
Green leaves
Stem
Cambium
Root
-0.12 -1.11 -0.85 0.14 -0.21 0.38 0.96 0.52 0.34 0.13 -0.09 -0.66 -0.73 -0.81 -0.19 0.97 1.09 -1.46 -1.1 -0.92
-0.26 -0.18 -0.48 -0.58 0.26 -0.51 0.4 0.49 0.2 0.01 0.44 -0.3 0.27 0.11 0.33 0.3 0.15 -0.52 -0.28 -0.91
-5.35 -3.22 - - -3.26 -1.24 1.96 0.42 1.88 1.32 1.2 -0.58 -1.55 -1.37 0.5 -0.04 0.47 -2.11 -1.99 -
0.86 0.38 0.94 0.52 0.35 -1.09 -0.47 -0.01 0.05 -0.2 0.24 -0.65 -0.41 -0.49 0.16 0.0 -0.38 -0.33 -0.93 -0.56
-2.42 -1.42 -4.25 -2.27 -1.82 -0.25 1.88 1.35 0.94 1.31 0.29 -0.54 0.45 0.46 -0.08 -1.75 -1.45 -2.33 -3.36 -0.18
-0.29 -0.66 -0.16 0.32 0.09 -0.07 0.6 0.28 -0.18 -0.4 0.2 -0.44 0.61 0.43 0.1 -0.23 0.18 -0.35 -0.46 -0.53
0.67 -0.24 -0.89 -0.46 -0.32 1.22 1.1 0.4 -0.61 -0.32 0.31 -0.43 -0.54 -0.52 0.39 -0.14 -0.51 -0.6 -0.5 -0.77
-0.41 0.04 -0.79 -0.44 -0.92 0.41 1.72 -0.17 -0.71 -0.62 0.92 0.26 0.11 -0.06 0.95 0.56 0.03 -4.22 -12.62 -6.4
-1.87 -1.54 -2.27 -1.36 -1.01 0.55 2.08 0.97 0.19 0.41 0.18 -0.19 0.46 -0.07 0.37 -0.95 -0.71 -0.5 -1.26 -1.78
-0.36 -0.69 -0.2 -0.52 -0.65 -1.38 1.06 0.51 0.18 -0.45 1.04 -0.46 0.32 0.1 1.15 -0.58 -0.12 -0.86 -0.83 -0.73
-0.26 0.63 -0.32 -0.36 -0.22 -2.05 2.09 -0.11 0.44 0.41 0.24 -1.34 0.51 -0.16 0.55 -1.01 -1.63 -0.97 -4.93 -1.6
- - - - -1.09 - 3.24 -0.19 0.12 -0.79 0.73 -2.05 -0.81 0.3 -0.47 0.26 -1.13 - 0.55 -
-1.99 -0.19 -1.18 -2.07 -1.18 -1.45 0.92 -0.04 0.78 0.49 0.99 -0.56 0.46 0.32 0.78 0.84 0.32 -1.04 -1.29 -1.14
-0.36 0.05 0.09 0.22 0.02 0.51 1.35 0.51 -0.5 -0.83 0.23 -0.2 0.22 0.11 0.14 -0.9 -0.9 -0.69 -0.31 -1.39
- - -5.16 -1.87 - 0.41 1.87 -0.14 0.55 0.56 1.52 -0.9 0.97 0.24 1.5 -0.36 -0.78 - -4.31 -3.41
-2.32 -0.17 -0.65 -1.5 -0.84 1.19 0.88 0.57 0.34 0.25 0.13 0.25 -0.02 -0.05 0.12 0.1 0.19 0.33 -1.78 -2.3
0.01 -0.8 -0.43 0.25 -0.16 0.68 1.05 0.13 -0.28 -0.72 0.25 -0.45 -0.48 -0.41 0.18 0.39 0.24 -0.24 -0.28 -0.49
-0.68 -0.63 -1.2 0.35 0.28 1.88 -0.34 -0.03 0.14 -0.1 -1.13 0.55 -0.31 0.64 -0.82 -0.28 0.08 -1.6 -0.52 -0.81
- - - - - -5.21 3.39 1.19 -1.99 -2.22 -0.52 -2.41 0.6 0.01 -1.4 - -4.43 - -7.04 1.53
-0.98 0.28 -1.09 -0.51 0.85 0.75 0.82 0.22 -0.99 -0.83 0.19 -0.2 -0.03 0.15 -0.01 -2.13 -0.84 0.12 0.5 0.31
-2.5 -0.07 -0.73 - -0.41 -1.77 2.01 0.6 0.56 -0.1 0.72 -0.36 -0.04 0.98 -0.25 -1.68 0.45 - -0.45 -0.59
-3.27 -2.88 -3.2 -1.06 -0.36 0.47 1.31 0.77 0.2 0.18 0.83 0.36 -0.09 -0.15 0.76 0.16 -0.03 -0.29 -0.96 -0.96
-1.08 -1.85 -0.91 -1.43 -1.54 -3.0 2.19 0.73 -0.87 -0.68 0.73 1.24 1.25 0.11 0.55 -3.29 -1.58 -1.53 -1.17 -1.66
-0.09 0.06 0.08 0.1 -0.15 0.26 0.96 -0.33 -0.06 -0.12 -0.56 -0.51 -0.66 -0.31 -0.57 1.13 0.32 -0.66 -0.43 -0.21
-1.6 -3.67 -3.08 -2.28 -0.29 0.03 2.21 0.53 -0.44 0.45 -1.56 0.92 0.27 0.25 -1.41 -1.08 0.15 1.0 -2.15 -1.15
-1.44 -2.18 -2.55 -1.68 -0.12 0.3 2.19 1.01 -0.74 0.12 -1.16 0.0 0.76 0.53 -1.01 -1.61 -0.57 0.86 -2.01 -1.4
-4.54 -2.41 - - -0.03 -1.79 1.85 0.8 0.21 0.26 1.12 -2.51 0.76 -0.05 0.42 1.52 -0.98 -2.74 -0.25 -3.66
-0.99 -2.0 -4.69 -3.78 -2.94 -0.32 2.04 -0.41 0.55 0.3 -0.33 -0.16 0.49 0.72 -0.47 1.11 0.21 -0.71 -2.89 0.16
- - - - -5.65 -2.61 2.86 -0.49 0.68 -0.63 0.4 -6.04 2.13 1.51 -0.04 -4.95 -5.15 -5.84 - -
- - - - -2.41 -1.44 2.3 1.08 1.52 0.41 0.25 -0.33 0.98 0.98 -0.07 -0.93 -1.02 -4.54 -1.91 -
0.78 0.71 0.72 0.45 0.49 -0.4 -0.27 -0.02 0.19 0.01 -0.83 -0.47 -0.59 -0.42 -0.55 0.18 -0.6 0.18 -0.43 -1.17
0.17 -1.07 -1.91 -0.85 -0.59 0.4 1.75 -0.1 0.06 0.31 -0.13 -0.33 -0.82 -0.85 -0.1 0.52 0.85 0.18 -1.09 -1.23
-2.37 -2.56 - -2.01 -1.6 0.09 2.09 1.28 1.3 1.42 -0.6 -0.49 -0.38 -0.41 0.27 -2.43 -3.22 -1.03 0.01 -1.91
0.78 -0.41 0.18 0.77 0.34 -0.25 -0.18 0.1 -0.25 -0.32 -0.26 -0.52 -0.13 -0.25 -0.26 0.64 0.22 0.07 -0.72 -1.03
-3.4 -5.44 -5.07 -4.31 -3.38 0.48 2.34 1.32 -0.4 -0.44 0.45 0.3 1.14 0.46 0.18 -0.63 -0.63 -3.21 -1.31 -2.84
0.69 0.54 -0.51 -0.39 0.35 -0.41 -0.5 -0.18 -0.03 -0.09 0.4 -0.65 0.03 0.06 0.39 0.64 -0.05 0.0 -0.88 -0.9
0.31 -0.74 0.11 -0.22 -0.01 -0.68 0.91 0.39 0.16 0.05 0.03 -0.11 0.45 0.28 -0.23 -0.28 -0.38 -0.46 -0.33 -0.37
-1.95 -0.27 -1.71 -1.56 0.51 0.04 0.22 0.45 0.58 0.6 -0.01 0.06 0.5 0.38 -0.0 -0.13 0.27 -0.04 -0.71 -0.31
-0.02 0.26 -0.62 0.31 -0.36 0.99 0.46 0.27 0.09 -0.29 -0.02 -0.61 0.16 0.15 -0.04 0.73 -0.18 -0.69 -1.13 -2.05
0.58 0.29 0.01 0.15 0.37 -0.54 -0.04 -0.05 -0.02 -0.25 0.12 -0.71 0.23 0.25 0.13 0.26 -0.27 -0.25 -0.72 -0.34
-0.05 -0.77 -0.02 0.61 -0.17 -2.34 1.69 -0.14 -0.41 -0.45 0.22 -0.19 -0.23 0.11 0.04 1.16 0.5 -0.88 -6.41 -5.94
- - -2.81 -1.25 -1.34 - 2.39 0.97 1.84 1.15 0.69 -0.02 -1.89 -1.22 0.22 -0.45 - - -0.46 -3.21
0.47 0.25 0.27 0.29 0.31 0.09 0.12 0.06 -0.29 -0.34 0.19 -0.58 0.2 0.07 0.28 -0.31 -0.76 -0.58 -0.2 -0.3
-0.67 0.09 -0.31 -0.43 0.17 -0.04 -0.71 0.23 0.55 0.3 -0.3 0.16 0.54 0.03 -0.33 0.47 0.32 -0.25 -0.1 -0.84
-0.61 0.02 -0.51 -0.0 -0.16 0.72 1.03 0.02 -0.16 -0.17 0.8 -0.34 -0.35 -0.57 0.69 -0.57 -0.53 -0.63 0.1 -0.85
1.17 0.89 1.04 0.76 0.39 -0.11 -0.81 -0.07 -0.09 -0.37 -0.69 -1.02 -0.57 -0.58 -0.48 0.16 -0.89 -0.07 -0.79 -1.57
0.89 0.15 0.68 0.66 0.52 -0.38 -0.52 -0.09 0.0 -0.33 0.06 -0.92 -0.04 0.28 -0.04 0.21 -0.67 -0.07 -1.84 -1.1
0.49 0.21 0.15 0.91 0.4 0.46 -0.29 0.27 -0.55 -0.67 0.03 -0.88 0.43 0.36 0.05 -0.03 -0.23 -0.36 -1.23 -2.57
-0.9 0.61 1.07 -3.81 -3.18 -0.2 2.03 0.14 -1.39 -1.14 -3.34 -2.37 0.87 1.09 -3.86 -4.26 -2.69 -2.18 -5.43 2.0
-1.26 -2.99 -3.13 -3.43 -3.32 -2.81 2.63 1.45 -3.6 -2.84 0.79 -0.59 1.62 0.45 0.18 - -7.84 -3.83 -4.51 0.82
0.27 -0.81 -0.49 0.49 -0.33 0.63 -0.12 0.19 -0.45 -0.65 -0.04 -0.11 -0.45 -0.58 -0.25 1.11 0.84 -0.61 -1.11 0.16
0.09 0.23 -0.33 0.18 0.07 -0.1 -0.73 -0.21 0.16 0.01 0.56 -0.54 -0.55 -0.57 0.5 0.72 0.25 0.06 -0.16 -0.86
- - - - - -2.94 1.79 1.24 1.33 0.97 1.07 -0.97 0.94 0.71 0.9 -0.5 -0.51 - -2.9 -
0.31 0.26 0.22 -0.01 0.32 -0.27 0.1 0.05 0.31 -0.2 0.86 -0.81 0.4 0.3 0.19 -0.51 -1.31 -0.37 -1.33 -0.41
1.18 0.99 0.96 0.64 0.81 -1.75 -0.86 -0.29 -0.42 -0.49 -0.79 -0.74 -0.06 -0.45 -0.58 0.12 -1.29 0.14 -0.51 -0.91
-1.65 -0.18 -3.15 -2.43 -2.51 -3.94 3.53 0.27 -0.95 -0.56 -0.4 -1.79 0.22 -1.71 -0.62 - -2.31 -3.2 -2.71 -0.47
-1.54 -2.87 -2.31 -2.54 -2.5 0.21 3.33 0.06 -0.74 -0.54 -0.57 -0.42 -1.47 -1.65 -0.45 0.01 -0.73 -4.61 -3.98 -0.21
-0.29 -0.03 -0.66 0.97 -0.3 -1.38 0.35 -0.1 0.58 0.76 0.37 -0.72 0.33 0.5 0.34 -0.1 0.55 -2.33 -1.26 -2.69
-2.76 - -3.87 -1.69 -1.71 1.64 2.71 -0.07 -1.39 -0.92 0.4 -0.39 -0.76 -0.74 0.75 -1.28 -1.07 -2.62 -2.95 0.58
0.53 1.16 0.68 0.52 0.33 -0.15 -0.32 -0.15 0.05 -0.67 0.07 -0.63 -1.98 -1.72 -0.09 0.36 -0.69 0.43 -0.25 -1.05
-3.66 -1.44 -2.86 -2.44 -1.12 -0.92 1.89 0.56 0.59 0.17 0.23 0.21 1.08 0.87 -0.04 0.16 -0.1 -1.59 -8.76 -0.33
-0.63 -0.36 -1.18 -0.01 -0.21 0.52 1.43 0.55 -0.16 -0.25 0.32 -0.04 0.25 -0.07 0.45 0.32 -0.49 -0.82 -1.49 -1.66
-0.74 -1.15 -1.53 -0.19 -0.38 0.06 1.45 0.44 0.14 -0.01 0.39 0.11 0.28 0.03 0.47 0.62 -0.13 -1.03 -2.37 -0.81
0.02 0.01 -0.42 -0.81 0.45 1.52 -1.09 -0.02 0.3 0.23 0.5 -1.65 0.43 -0.05 -0.09 0.16 -0.4 -0.81 -0.62 -1.05
-1.74 - - - - 0.39 3.14 0.37 1.16 0.38 -0.32 -2.7 - -3.31 0.62 -0.52 -1.7 - 0.22 -
-1.9 0.87 -0.36 -0.93 -1.69 -3.66 1.77 -0.31 0.24 0.34 0.26 -1.03 1.36 1.01 0.09 -2.02 -2.12 -2.3 -2.21 0.39
-1.34 0.01 -0.55 -0.55 0.31 -0.6 -0.46 0.41 0.35 0.42 0.31 0.12 0.12 0.29 0.38 0.24 0.18 0.01 -0.48 -0.53
-1.21 0.4 -0.9 -0.99 -0.21 0.13 2.19 0.02 -0.23 -0.29 0.35 -0.53 0.17 -0.03 0.37 -0.25 -0.75 -0.24 -7.62 -1.55
- - -2.54 - - 1.45 1.33 -0.59 1.59 1.34 1.74 -1.04 -2.88 -4.0 1.12 -0.38 0.28 - -2.29 -
0.46 -0.17 -0.02 0.29 0.13 -0.21 0.1 0.23 -0.16 -0.27 0.28 -0.12 0.34 0.15 0.22 0.22 -0.07 -0.44 -0.9 -0.9
0.29 0.72 0.16 -0.15 -0.08 1.03 -0.14 -0.07 -0.18 -0.41 0.37 -0.65 0.18 -0.06 0.35 -0.28 -0.4 -0.53 -0.75 -1.11

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.