Heatmap: Cluster_92 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	Ovule	Ovule, mature	Ovule, pollinated	Strobilus, female	Ovulate strobilus	Microstrobilus	Kernel	Leaf	Leaf, female	Leaf, male	Leaf, salicylic acid	Leaf, seedling	Leaf, truncation control	Leaf, truncation treatment	Leaf, water	Yellow-green stripe leaves	Green leaves	Stem	Cambium	Root
Gb_00128	-0.78	-1.31	0.07	-1.26	0.12	-2.22	-	0.15	-1.8	-1.14	-1.62	0.82	-0.56	-1.08	-1.26	-0.6	1.1	1.55	0.69	1.76
Gb_00134	-0.8	0.03	-1.08	-0.01	-2.62	-2.52	-0.12	0.61	0.75	1.94	1.06	-3.08	0.23	-0.73	0.94	-0.11	-27.54	-1.83	-0.83	-0.02
Gb_00756	0.46	-1.51	-	1.99	-0.26	-2.18	-5.77	0.09	-0.41	-0.7	1.06	-1.18	1.14	0.52	-0.6	-0.7	0.55	-0.23	-3.47	-0.11
Gb_01147	1.21	-0.71	0.03	1.08	0.55	0.14	-0.94	0.55	-0.46	-0.63	-0.71	-0.48	-0.95	-0.25	-1.01	-0.07	-0.49	0.8	-0.19	-0.87
Gb_01148	1.26	-0.32	0.29	1.16	0.61	0.19	-1.14	0.43	-0.5	-0.58	-0.68	-0.49	-1.69	-1.68	-0.92	-0.22	-0.34	0.7	0.41	-1.28
Gb_01744	0.38	0.44	0.28	0.25	0.08	-0.53	-0.82	-0.17	0.05	-0.31	0.13	-0.51	-0.12	0.09	-0.04	0.7	-0.01	0.13	-0.74	-0.3
Gb_01789	-1.74	-0.68	-1.02	-1.66	-0.23	-1.18	-0.25	-0.28	-0.77	-0.64	-0.29	-0.24	-0.28	0.45	0.14	1.31	0.7	-0.0	-1.48	1.87
Gb_01914	0.48	0.22	0.17	0.58	0.41	0.27	-0.66	0.07	-0.28	-0.67	-0.26	-0.48	-0.22	-0.28	-0.25	0.4	-0.32	0.28	0.13	-0.63
Gb_01964	0.18	-0.17	-0.45	0.1	0.77	0.1	0.7	0.03	-0.53	-0.54	0.28	-0.75	-0.51	-0.52	0.13	-0.42	-0.19	0.86	-0.2	-0.4
Gb_03870	0.4	0.12	0.09	0.35	0.34	0.07	-0.82	0.19	-0.13	-0.23	0.26	-0.59	-0.15	-0.47	0.36	-0.61	-0.84	0.36	0.02	0.24
Gb_03916	0.37	-1.37	-0.06	1.35	0.66	-1.53	-1.28	0.75	-0.33	-0.17	-0.04	-0.24	1.41	0.43	-0.45	0.43	-	-2.14	-1.18	-0.89
Gb_04467	0.66	-	-	1.03	1.3	-6.0	-0.21	-0.35	-2.72	-5.15	-	-7.66	2.19	2.25	-	-	-	0.06	-	0.76
Gb_04650	-1.1	-2.06	-3.73	-0.69	-1.08	-2.66	-	0.53	-0.56	-0.4	0.87	-0.62	2.55	1.78	1.44	-	-2.26	-4.71	-	-1.57
Gb_04934	0.4	-0.08	0.05	0.42	0.16	0.36	-0.66	0.1	-0.4	-0.52	0.03	-0.34	0.46	0.49	-0.05	-0.03	0.07	-0.24	-0.69	-0.43
Gb_04974	-2.03	-6.78	-2.79	-2.78	-5.55	-3.28	-1.37	0.2	0.64	0.35	1.42	-0.56	1.96	1.22	1.24	-0.42	-0.46	-2.0	-4.63	0.31
Gb_05836	1.04	-0.11	0.53	1.14	0.33	-0.07	-1.36	0.09	-0.38	-0.71	0.45	-0.52	-0.1	-0.24	0.33	-0.43	-0.81	-0.35	-0.41	-1.44
Gb_06250	0.77	-0.79	0.06	0.87	1.04	0.07	-0.57	0.2	-0.76	-0.87	-0.52	-0.64	0.17	-0.19	-0.46	-1.02	-0.2	0.61	0.01	-0.28
Gb_06650	-0.23	-0.11	-0.49	0.18	-0.11	0.67	-1.45	0.2	-0.15	-0.09	0.75	0.01	0.07	-0.35	0.72	-0.17	-0.03	-0.34	-1.48	0.39
Gb_07806	0.73	-0.85	-0.58	0.54	-0.08	-0.39	-1.61	0.23	0.27	0.09	0.2	-0.43	0.67	0.65	-0.03	-0.19	0.09	0.02	-1.11	-0.46
Gb_08183	0.84	-0.46	0.31	0.89	0.69	-0.25	-0.38	-0.1	-0.85	-1.05	-0.84	-0.64	-1.37	-1.19	-0.83	0.75	0.33	1.03	0.12	-0.89
Gb_08262	1.62	-1.92	0.0	0.77	0.68	-2.58	-1.54	0.31	0.07	-0.11	-0.39	-0.96	0.54	0.39	-0.2	-0.34	0.4	-0.15	-1.74	-1.26
Gb_08564	1.02	0.89	0.04	0.72	0.75	0.04	-0.83	-0.01	-0.5	-0.52	-0.09	-0.54	0.05	-0.29	-0.15	-1.21	-1.62	0.28	-0.23	-0.84
Gb_08726	1.21	-1.82	-1.45	0.99	0.88	-0.45	-1.56	0.63	-0.21	-0.01	-0.81	-1.2	1.11	0.87	-0.73	-1.05	-0.55	0.49	-5.07	-0.83
Gb_09282	-0.52	0.13	-0.55	-0.04	-0.04	0.03	-0.98	0.16	0.43	0.16	0.53	-0.22	-1.71	-1.47	0.54	0.63	0.36	0.0	-0.08	0.35
Gb_09365	0.63	-	-17.89	0.79	1.49	-2.4	-0.17	0.63	-0.09	-1.93	-2.85	-3.32	1.73	1.58	-0.67	-1.04	-0.23	-0.87	-1.54	-0.55
Gb_09372	-0.49	-0.1	0.09	0.56	-1.54	-0.82	-1.7	0.13	-0.15	0.09	-2.46	-1.27	-0.94	-1.19	-1.88	-1.57	0.72	0.85	0.84	2.05
Gb_09398	0.68	-0.25	0.21	0.45	0.21	0.52	-0.96	0.03	-0.38	-0.69	-0.02	-0.59	-0.87	-0.6	0.02	0.14	0.55	-0.16	0.43	-0.29
Gb_09449	0.71	-0.48	-0.11	0.7	0.16	-0.62	-1.56	0.16	0.09	-0.27	0.03	-0.48	0.68	0.56	-0.14	0.42	0.11	-0.5	-0.94	-0.72
Gb_09487	-1.48	-0.85	-0.93	-0.17	-1.29	-1.99	-1.15	0.19	0.56	0.1	0.87	-0.07	0.81	0.66	0.74	0.68	0.35	-1.49	-2.97	0.79
Gb_09864	0.45	-1.06	-0.46	0.47	0.06	-0.44	-1.67	0.3	0.53	0.13	-0.0	-0.09	0.61	0.54	0.09	-0.2	-0.29	0.1	0.05	-1.25
Gb_10107	-1.85	-25.52	-2.85	-0.54	-1.04	-0.6	-0.48	0.6	-0.78	-0.76	1.2	-1.11	0.71	0.63	1.25	0.84	1.45	-3.79	-7.51	0.53
Gb_10110	-0.33	-	-	2.92	-21.89	0.35	-0.14	0.43	-33.6	-	-	-	1.93	1.83	-	-	-	-1.26	-3.21	-2.2
Gb_10451	0.67	-0.12	0.15	0.39	0.48	-0.54	-0.7	0.17	-0.21	-0.37	0.13	-0.26	-0.44	-0.56	0.14	-0.16	-0.18	0.1	0.37	0.02
Gb_10920	-1.33	-4.04	-3.51	-1.91	-1.53	-2.5	-2.8	0.69	0.42	0.48	1.55	0.41	1.58	1.06	1.41	-0.61	-0.76	-3.59	-8.67	-0.2
Gb_11056	-	-4.12	-2.87	-2.26	-3.22	-4.45	-4.13	0.53	1.06	1.48	1.38	0.58	0.9	0.83	0.76	0.1	0.78	-3.4	-2.96	-0.65
Gb_12396	1.21	-0.72	0.23	0.91	0.93	1.22	-3.41	-0.24	-1.08	-0.92	0.11	-2.71	-1.6	-1.73	-0.08	-0.86	-0.22	0.72	-0.12	0.1
Gb_12405	1.03	0.01	0.83	0.76	0.85	1.32	-3.3	-0.31	-1.25	-1.01	-0.68	-2.43	-1.47	-1.77	-0.7	-1.12	-0.51	0.77	0.7	-0.34
Gb_13399	-1.07	-1.77	0.74	1.56	-0.48	1.85	-2.66	0.03	-1.76	-1.77	1.1	-0.97	-0.12	0.02	0.4	-2.46	-1.19	-0.73	-	0.46
Gb_14298	-0.12	-1.57	-0.44	0.51	0.92	-1.43	-4.64	0.36	0.46	-0.03	-22.09	-1.03	1.85	1.42	-2.07	-0.63	-0.22	-0.2	-0.04	-1.78
Gb_14410	0.66	0.33	0.42	0.57	0.39	0.45	-2.43	0.03	-0.48	-0.95	-0.47	-0.72	-0.15	-0.19	-0.49	0.38	0.32	-0.29	0.53	-0.74
Gb_15880	-	-	-	-	-	-	-	1.5	-0.54	-	-	-	3.53	-	2.31	-	-	-	-	-
Gb_15956	-1.68	-	-	-	-	-2.01	-3.13	0.91	0.98	1.61	1.67	-1.86	1.32	0.66	1.0	-0.88	-2.16	-3.32	-3.77	0.97
Gb_16046	1.44	-	-1.58	1.27	1.17	-0.69	-0.1	-0.28	0.02	-0.2	-2.91	-3.52	1.43	1.31	-1.73	-31.17	-22.45	0.24	-1.95	-0.15
Gb_16090	-0.07	-1.05	-0.85	-1.44	-0.24	-2.79	0.29	0.58	1.64	1.85	-1.23	-1.46	-1.29	-0.54	-0.58	-0.54	-0.63	-3.6	-	1.69
Gb_16889	0.24	0.19	0.13	0.45	0.39	-0.2	-0.37	-0.04	-0.05	-0.28	-0.38	-0.79	-0.06	-0.06	-0.31	0.3	-0.13	0.3	0.19	-0.14
Gb_17011	0.65	-0.69	-0.17	-0.02	0.67	0.34	-0.22	0.21	-0.23	-0.36	-0.09	-0.53	-0.45	-0.4	-0.21	-0.16	0.09	0.46	0.26	-0.14
Gb_17194	0.42	0.31	0.28	0.77	0.25	-0.24	-1.19	0.07	-0.21	-0.43	-0.1	-0.65	0.12	0.1	-0.08	0.26	-0.43	0.08	0.09	-0.64
Gb_17935	-2.57	-	-6.26	1.24	1.21	-4.49	-	0.25	0.04	-0.21	-1.39	-0.66	1.9	1.71	-0.86	-0.48	0.68	-0.52	-4.8	-1.31
Gb_18294	0.53	0.31	0.53	0.9	0.08	0.1	-0.79	0.03	-0.44	-0.6	-0.53	-0.72	0.33	0.37	-0.42	-0.3	0.34	0.06	-0.81	-0.77
Gb_18686	0.38	-0.04	0.02	0.1	0.42	0.06	-0.0	0.16	-0.39	-0.33	0.2	-0.43	-0.31	-0.39	0.2	-0.44	-0.16	0.37	0.3	-0.28
Gb_19465	0.88	0.33	0.46	0.34	0.48	-0.23	-0.87	0.1	-0.35	-0.64	0.03	-1.03	0.19	-0.31	-0.05	-0.49	-0.89	0.41	-0.1	0.05
Gb_19614	0.11	-1.58	-2.57	2.1	0.9	-0.5	-0.43	0.29	-1.42	-1.44	0.16	-0.66	0.7	0.03	-0.15	0.14	-1.34	-0.21	-0.47	-1.09
Gb_20283	0.78	-0.28	0.08	0.8	0.53	-0.34	-0.95	-0.03	-0.22	-0.58	0.0	-0.63	0.14	0.21	-0.13	-0.13	0.2	0.01	-0.44	-0.37
Gb_21900	0.9	0.36	0.53	0.73	0.37	-0.36	-0.84	0.26	-0.6	-0.55	-0.06	-0.57	0.26	-0.06	-0.12	-0.78	-1.18	0.12	0.11	-0.55
Gb_21901	0.9	0.36	0.53	0.73	0.37	-0.36	-0.84	0.26	-0.6	-0.55	-0.06	-0.57	0.26	-0.06	-0.12	-0.78	-1.18	0.12	0.11	-0.55
Gb_22378	0.03	-0.28	-0.25	-0.05	0.57	0.31	-0.69	0.31	-0.81	-0.4	0.38	-0.27	-0.46	-0.35	0.53	0.15	0.3	0.69	-0.44	-0.62
Gb_22505	-5.05	-	-5.52	-	-3.98	-	-5.35	0.47	0.99	1.18	1.34	0.08	1.1	0.64	0.91	0.64	1.0	-3.48	-	0.48
Gb_22663	0.47	0.43	-7.51	0.64	0.68	-0.9	-1.05	0.49	0.55	0.2	-0.23	-1.14	1.04	0.79	0.54	-1.52	-4.38	-0.18	-0.58	-0.8
Gb_22826	-	-	2.47	3.09	-	-	-	-1.49	0.3	-1.16	-	-	1.29	-	-	-	-	-	-	0.56
Gb_23462	0.32	1.0	-1.77	-0.96	1.09	-0.96	1.13	-0.07	-0.5	-1.12	-	-0.64	0.95	0.97	-4.8	0.6	-0.58	0.21	-3.85	0.03
Gb_23850	1.03	-0.11	0.22	0.73	0.84	-0.06	-0.63	0.33	-0.52	-0.77	-0.37	-0.58	-0.03	-0.39	-0.44	-0.75	-0.84	0.46	0.09	-0.42
Gb_25073	-1.05	0.8	-0.96	-16.45	0.73	-0.65	-1.05	0.22	-1.27	-1.62	0.7	0.3	1.75	1.49	0.37	-	-4.46	0.15	-1.12	-0.66
Gb_25503	-0.35	-0.23	-0.2	-0.35	0.64	0.75	-1.6	0.36	-0.64	-0.72	-0.51	0.69	-1.62	-1.43	-0.55	-0.34	0.58	0.74	0.63	0.49
Gb_26973	-1.18	-1.29	-1.88	-1.0	-0.36	-1.41	-2.48	-0.15	0.04	-0.19	0.34	-0.71	-0.39	-0.12	0.36	1.34	0.05	0.58	-0.08	1.76
Gb_26974	-0.99	-0.12	-1.48	-1.43	-0.12	-0.99	-2.24	-0.16	0.07	-0.18	0.13	-0.67	-1.22	-1.17	0.28	1.02	-0.08	0.69	0.73	1.73
Gb_27401	0.42	-	-	1.66	-0.67	-	-4.79	1.13	-1.27	-1.96	0.84	-4.61	1.8	2.12	0.67	-4.72	-2.39	-28.03	-32.74	-1.03
Gb_27707	-1.18	-5.03	-2.78	-0.33	-0.26	0.97	-2.82	0.61	-0.1	-0.01	0.87	-1.08	1.76	1.13	0.31	-0.7	-0.61	-0.53	-0.43	-1.44
Gb_27951	-0.64	-1.26	-1.14	0.58	-2.13	-0.76	-3.4	1.03	0.16	-0.1	0.21	-1.51	2.05	1.05	-0.84	0.81	0.39	-1.21	-3.58	-2.92
Gb_28527	-0.99	-1.84	-0.89	-0.47	-1.31	-1.01	-3.2	0.54	1.03	0.65	0.59	0.08	-0.0	0.06	0.37	1.24	0.64	-1.15	-5.69	0.67
Gb_29438	0.73	-0.22	0.2	0.58	0.23	0.01	-0.83	0.29	-0.23	-0.44	0.34	-0.63	0.24	0.06	0.12	-0.37	-0.86	0.25	-0.52	-0.22
Gb_29522	-2.57	-	-	-0.07	-3.26	-	-2.14	1.03	-4.07	-2.92	-1.46	-2.65	3.18	2.42	-0.21	-19.7	-	-2.18	-1.93	-5.26
Gb_29586	-1.49	-1.08	-1.63	-1.57	-0.52	1.34	-1.67	-0.79	0.66	0.61	-2.09	-3.36	-1.81	-2.42	-1.15	0.12	0.05	0.81	1.36	1.85
Gb_30492	0.41	0.4	-0.04	0.66	1.12	0.49	-0.69	0.05	-0.7	-0.75	0.0	-0.46	-0.8	-0.87	-0.07	-0.63	-0.77	0.62	0.24	-0.7
Gb_31629	0.54	-0.03	-0.01	0.54	0.67	-0.29	-1.0	0.3	-0.41	-0.46	-0.16	-0.38	0.02	-0.28	-0.13	-0.15	-0.37	0.37	0.4	-0.33
Gb_31753	0.22	-0.96	-0.65	0.8	0.85	-1.47	-0.26	0.05	-0.36	-1.07	0.4	-1.37	-2.15	-2.37	-0.19	-0.76	-1.11	1.23	0.42	1.54
Gb_33717	-0.66	-1.22	-0.51	-0.17	0.16	0.78	-2.92	0.02	-0.04	-0.5	-0.1	-1.43	-1.4	-1.46	0.16	0.49	-0.01	-0.01	0.59	1.86
Gb_33723	-0.35	-0.22	-0.35	-1.32	0.04	0.77	-2.62	-0.09	-0.12	-0.4	-0.39	-1.09	-1.46	-1.63	-0.0	0.09	-0.39	0.42	1.47	1.48
Gb_33724	-0.44	-1.09	-0.11	-1.32	-0.09	0.9	-2.82	-0.24	-0.19	-0.72	0.01	-1.09	-0.96	-1.06	-0.09	0.35	-0.22	0.19	1.04	1.79
Gb_33725	-0.28	-0.63	-0.16	-0.36	-0.1	0.57	-2.9	-0.12	0.07	-0.57	-0.05	-1.56	-2.01	-1.69	-0.12	0.46	-0.47	0.53	1.06	1.7
Gb_34026	0.81	-	-	-10.44	-2.13	-23.23	0.67	1.29	-1.79	-2.51	1.83	0.14	1.6	1.44	-0.77	-0.16	-3.13	0.61	-	-10.59
Gb_34764	0.33	-1.03	-1.85	0.66	-0.16	-0.9	-0.95	0.53	0.96	0.47	-0.3	-1.02	-0.56	-1.56	-0.18	1.63	0.73	-1.51	-0.37	-0.77
Gb_34957	-0.61	-1.83	-0.98	1.96	0.52	-0.38	-2.59	0.15	-1.2	-2.08	-1.37	-2.61	1.64	1.5	0.21	-	-	0.71	-6.64	0.28
Gb_35384	-1.67	0.02	-0.99	-0.45	0.42	-0.47	-0.33	-0.25	-0.63	-0.26	-0.69	0.02	-1.33	-0.96	-0.32	0.56	0.33	0.68	0.68	1.57
Gb_35950	-0.67	-	-	-0.64	-1.76	-0.97	-2.07	1.3	-7.0	-23.56	0.1	-	2.61	2.07	1.2	-	-	0.14	-12.82	-1.23
Gb_36474	0.7	-0.99	-0.6	0.47	0.15	-0.24	-0.55	0.23	0.32	-0.44	0.31	-0.66	0.37	0.13	0.15	0.23	0.2	-0.16	-0.43	-0.5
Gb_36516	-0.01	-0.28	-0.35	0.45	0.4	0.14	-0.69	0.25	0.12	-0.34	-0.59	-0.18	-0.45	-0.54	-0.6	0.22	-0.72	0.69	1.17	-0.63
Gb_37448	0.34	-0.94	-0.38	1.06	0.69	0.04	-0.35	0.15	-0.43	-0.73	-0.29	-0.82	-0.25	-0.07	-0.47	-0.27	-0.2	0.43	1.0	-0.95
Gb_38126	-1.06	0.26	-1.35	-1.52	-0.32	-0.89	-2.47	-0.01	0.29	-0.16	0.45	-0.5	-0.67	-0.3	0.77	1.26	0.56	0.3	-0.36	0.89
Gb_38127	-0.72	-0.73	-1.48	-0.7	0.13	-2.07	-0.56	-0.06	0.37	-0.01	0.59	-0.57	-0.9	-0.47	0.56	1.43	0.46	0.27	-0.27	0.63
Gb_38200	1.27	-0.94	0.4	-0.18	0.97	-0.1	-1.31	-0.19	-0.36	-0.25	-0.65	-0.69	0.84	0.39	-0.67	-0.26	-0.14	0.02	-1.8	0.08
Gb_38603	0.52	0.03	0.31	0.68	0.3	0.05	-0.42	0.12	-0.29	-0.58	-0.35	-0.71	-0.15	-0.16	-0.28	0.1	-0.14	0.36	0.32	-0.74
Gb_38784	0.44	-0.63	0.05	0.3	0.5	-0.27	-1.39	-0.08	-0.32	-0.41	0.29	-0.5	0.24	0.47	0.28	-0.21	-0.15	0.21	-0.11	0.07
Gb_39471	-0.47	-1.96	-1.6	-0.75	-1.69	-2.24	-0.33	0.76	1.07	0.69	0.37	-1.08	1.56	1.06	0.43	0.59	-0.26	-0.25	-7.55	-5.4
Gb_39984	0.3	-0.03	-0.19	0.51	0.62	0.03	-0.73	-0.48	-0.65	-0.98	-1.34	-0.85	-0.49	0.07	-1.38	0.22	1.23	-0.2	1.33	-1.06
Gb_40068	0.33	-1.02	-0.12	1.62	0.2	-1.2	-2.85	0.0	-0.55	-1.11	0.23	-0.25	0.55	0.8	-0.25	0.87	-0.79	-0.56	-0.51	-0.89
Gb_40866	0.91	-1.07	0.28	0.41	0.45	-0.21	-1.11	0.1	-0.32	-0.46	0.5	-0.47	-0.47	-0.72	0.56	0.21	0.04	0.2	-0.66	-0.16
Gb_40912	0.31	0.39	0.46	0.57	0.45	-0.26	-0.64	-0.12	-0.14	-0.18	0.12	-0.84	-0.32	-0.31	-0.04	-0.02	-0.09	0.1	0.17	-0.54
Gb_41406	0.22	-0.31	-0.25	0.21	0.34	0.37	-1.18	0.18	-0.31	-0.32	0.52	-0.3	0.53	0.42	0.45	-0.65	-0.4	-0.23	-0.98	0.21
Gb_41407	-0.21	-0.88	-0.95	0.52	-0.01	-0.03	-2.0	0.1	0.02	-0.02	1.02	-0.17	0.79	0.9	0.73	-0.79	-0.66	-0.5	-1.38	-0.19
Gb_41501	0.45	0.13	-0.13	0.5	0.53	0.35	-0.97	0.17	-0.21	-0.6	-0.48	-0.46	0.15	0.03	-0.37	-0.59	-0.9	0.56	0.58	-0.32

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.