Heatmap: Cluster_200 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	Ovule	Ovule, mature	Ovule, pollinated	Strobilus, female	Ovulate strobilus	Microstrobilus	Kernel	Leaf	Leaf, female	Leaf, male	Leaf, salicylic acid	Leaf, seedling	Leaf, truncation control	Leaf, truncation treatment	Leaf, water	Yellow-green stripe leaves	Green leaves	Stem	Cambium	Root
Gb_00115	-20.57	-	0.57	-0.91	-1.65	-	-	1.36	-0.7	-2.73	3.08	-3.47	0.45	1.32	0.94	-	-	-	-	-
Gb_00430	0.76	-0.62	0.63	0.02	0.14	-1.76	-1.69	0.13	-0.52	-0.48	0.71	-0.44	0.19	-0.49	0.77	0.13	-0.18	-0.06	0.8	-1.95
Gb_00752	1.07	-0.59	0.93	1.24	0.26	-1.54	-0.77	0.18	-0.57	-0.57	0.24	-0.28	-0.78	-1.23	0.05	-0.41	-0.06	-0.01	0.11	-0.93
Gb_01575	0.22	-1.28	-0.1	0.97	-1.0	-0.28	-0.25	0.76	0.48	0.53	1.69	-0.84	-2.93	-3.34	1.49	-0.84	-0.37	-1.74	-1.47	-5.93
Gb_02162	-3.31	-	-	-	-	-	-	1.22	2.14	1.7	0.44	-0.02	-1.97	0.18	1.14	-0.3	1.66	-	-	-
Gb_02759	0.27	-0.16	-0.22	-0.25	0.39	-0.61	-1.18	0.84	-0.08	-0.35	0.88	0.43	-0.69	-0.65	0.4	-0.06	0.49	-0.07	-0.52	-1.07
Gb_02781	-	-	-	-	-	-	-	3.12	-	-	3.17	-	-	-	-2.81	-	-	-	1.09	-
Gb_04816	0.87	-0.67	0.39	0.51	0.26	-0.98	-1.45	0.61	-0.19	-0.73	0.65	-0.6	-1.18	-0.73	0.85	0.11	-0.08	0.24	-0.51	-0.41
Gb_04908	-0.82	-	-	1.29	-0.36	-1.07	1.02	0.9	-0.05	0.34	0.14	0.47	0.94	0.59	-0.6	-	-	-1.58	0.5	0.36
Gb_05032	1.14	1.05	1.38	-	1.19	-2.58	-	-0.27	0.49	-0.83	-0.48	-1.76	-2.94	-2.85	-0.07	-	-0.78	0.83	1.5	-1.19
Gb_07060	0.77	-0.17	0.09	0.41	0.47	-0.86	-0.0	0.04	-0.24	-0.43	0.58	-0.7	-0.74	-0.87	0.43	-0.06	-0.72	0.2	0.06	0.12
Gb_07061	0.51	0.34	0.57	0.35	0.4	-0.61	-0.03	0.08	0.03	-0.42	-0.11	-0.97	0.4	-0.22	-0.03	-0.27	-0.89	-0.23	-0.04	-0.01
Gb_07944	-3.88	-	-	-3.14	-4.52	0.67	-2.2	1.71	-0.7	-0.02	1.3	1.41	0.0	-1.23	1.26	-0.18	1.62	-2.58	-9.05	-4.93
Gb_08155	-2.25	-	-2.04	-	-2.76	-1.67	-2.68	2.48	-1.73	-4.61	1.2	-2.5	0.91	1.94	0.87	0.03	-	0.54	-1.53	-2.64
Gb_08435	-	-	-	2.84	-	-	-21.22	1.0	-	-	2.33	-1.6	-	-	2.19	-	-	-	-0.11	-
Gb_08451	0.79	1.39	1.59	-0.84	-0.23	-0.15	1.25	-1.61	-3.08	-3.93	-3.68	-3.02	-28.03	-28.3	-4.29	-0.38	-1.06	0.2	2.0	-0.36
Gb_08532	-	-	-	1.04	-	-	-3.83	0.5	-	-	-2.09	-	3.1	2.9	-	-	-	-	-2.81	-
Gb_08544	-0.63	0.71	-0.9	-2.43	0.31	-1.57	-0.71	0.57	0.62	0.61	0.79	-0.92	-0.36	-0.41	0.13	0.15	-0.45	-0.0	0.78	-0.3
Gb_09050	-0.76	-	0.22	-2.21	1.34	0.55	-0.42	-0.09	-3.37	-3.02	0.11	-0.31	-1.53	-1.89	-2.02	-	-2.15	0.83	2.21	1.47
Gb_09476	-	3.52	0.11	-	-	-0.91	-12.44	1.97	-	-	-	-	-0.7	-1.59	-17.91	-	-	-	1.02	-
Gb_10617	0.11	1.11	0.97	-0.36	1.12	-1.97	-0.4	-0.4	0.03	-0.05	0.14	-1.45	-1.61	-1.58	0.26	-0.77	-2.91	0.1	1.01	-0.05
Gb_11305	-0.99	-1.8	-1.3	-0.22	-0.2	-1.72	-3.41	0.56	0.37	0.01	0.99	-1.8	0.39	0.54	0.98	1.02	0.56	-0.05	0.13	-1.57
Gb_11610	2.79	-	-	-	-	-	-	0.85	-	-	-	-	-	-	3.49	-	-	-	-	-
Gb_12641	-9.32	-	-	-	-	-	-	2.02	-	-	2.07	-	-	-	3.43	-	-	-	-0.03	-
Gb_13081	-	-	-	-	-	-	-	-0.45	-	-	-	-1.74	2.73	3.3	1.29	-	-	-	-	-
Gb_13145	-4.6	-3.29	-4.46	-	-	-5.62	-3.02	4.24	-5.37	-5.21	-	-	-	-7.3	-	-1.11	-4.69	-3.96	-4.84	-2.95
Gb_13318	-	-	-	-25.06	0.52	-	-	0.03	-	-	1.46	-	2.38	2.85	0.82	-	-	-4.24	-	-0.76
Gb_13343	0.52	0.33	0.46	0.67	0.13	-1.59	0.31	0.09	-0.16	-0.23	0.54	-0.5	-0.9	-1.05	0.47	-0.44	-0.48	-0.21	0.31	-0.42
Gb_13816	-0.03	1.62	0.5	0.44	-0.6	-1.74	-1.22	0.13	-1.42	-1.29	0.68	-1.2	1.0	0.85	0.78	-2.13	-0.26	-0.26	-3.75	-1.35
Gb_13963	0.77	0.1	0.45	0.62	0.43	-0.49	0.25	0.14	-0.23	-0.36	0.13	-0.4	-0.73	-1.05	0.12	-0.36	-0.42	-0.03	0.15	-0.5
Gb_14000	-2.12	-0.01	-1.22	1.74	-0.26	-4.75	-6.04	0.96	0.54	0.07	-2.09	-0.63	-6.01	-	-3.73	1.61	2.38	-1.25	-	-4.83
Gb_14296	-1.47	2.21	2.22	1.38	-8.79	-2.27	-1.49	-0.92	-5.33	-6.09	-2.67	-2.28	-4.05	-5.27	-3.88	-4.01	-3.19	0.01	2.24	-2.17
Gb_15201	0.56	1.37	-	2.65	-	-	-	0.78	0.32	-	-0.07	-	-	-	0.81	-	1.44	-0.1	-1.53	-
Gb_15378	-	-	-	-	-	-	-	0.21	-	-	-	-	0.66	4.11	-	-	-	-	-	-
Gb_16645	-2.02	-0.46	-0.42	-	0.8	0.55	-0.79	0.48	-	-	1.55	-3.16	1.52	1.71	1.18	-	-	-0.79	-0.34	-1.78
Gb_16751	-5.03	-	-	-4.36	-3.2	2.0	-5.19	2.48	0.35	-0.45	-1.13	-2.28	1.23	1.61	-1.18	-0.57	-0.13	-6.26	-5.23	-3.95
Gb_16980	0.07	0.73	0.44	-1.73	0.25	0.17	-0.83	0.48	-0.56	-0.42	1.04	-0.12	-1.45	-0.97	0.85	-0.15	-0.11	-0.65	0.45	-1.13
Gb_17254	-0.96	-0.26	-0.82	-0.94	0.1	-0.16	-	1.45	0.0	-0.13	0.11	0.15	0.92	1.46	-0.07	0.35	-0.14	-0.22	-3.53	-4.49
Gb_17342	-	-	-	-	-1.66	-3.4	-	0.94	2.25	1.67	0.11	-0.54	0.76	1.27	0.17	0.2	0.6	-6.7	-	-4.1
Gb_17848	-0.91	-	-	2.74	-	-1.96	-2.09	1.02	-	-	-	-	1.79	2.63	-0.88	-	-	-	-3.59	-
Gb_18167	0.6	0.03	0.03	0.43	0.47	-1.0	-0.16	0.26	-0.09	-0.31	0.72	-0.94	0.19	-0.37	0.47	-1.25	-0.2	0.36	-0.39	-0.83
Gb_18168	0.93	-0.55	1.13	0.56	-0.06	-3.79	-0.59	-0.34	-0.07	-0.15	0.74	-0.81	-1.07	-1.38	0.64	0.37	-0.39	-0.96	0.34	-0.12
Gb_18466	1.86	0.34	1.19	0.5	0.68	-3.25	-0.68	-0.1	-0.49	-0.08	0.76	-1.59	-1.81	-2.76	-0.22	-0.15	-1.43	-0.03	-1.32	-0.95
Gb_18871	-4.15	-1.52	-2.31	-1.39	-27.25	-4.64	-3.21	2.36	-1.51	-2.26	-0.88	-19.83	2.44	1.15	2.15	-	-	-1.29	-6.34	-3.16
Gb_19543	0.4	0.56	0.21	0.15	1.28	-0.84	0.79	-0.46	-0.96	-0.41	-0.2	-1.27	-1.55	-1.23	-0.29	-1.72	-1.77	-0.02	1.29	0.41
Gb_19668	0.83	-0.3	-0.05	-0.02	-0.12	-0.77	-0.9	0.25	-0.92	-0.52	0.76	-0.89	-0.11	0.01	1.13	0.59	0.63	-0.7	-0.87	-1.27
Gb_19721	-0.06	-0.61	0.32	1.53	-0.36	-2.46	-2.47	0.38	-8.22	-	0.64	-2.48	1.82	1.84	0.4	-10.02	-1.26	-1.81	-0.09	-
Gb_19948	0.32	-	-0.09	-1.79	-1.24	-2.33	-0.2	0.18	-0.07	0.15	0.77	-0.68	1.61	1.18	1.1	-0.23	-0.15	-1.9	-4.1	-0.03
Gb_21217	-0.01	0.06	0.92	-0.93	0.65	-0.72	-0.97	-0.02	-0.54	-1.26	0.83	-1.36	-1.76	-1.76	0.65	0.35	0.07	0.4	1.16	-0.81
Gb_21268	-0.59	-0.27	0.54	0.62	-0.45	-0.18	-0.36	0.18	-0.35	-0.4	0.93	-1.49	-5.13	-4.19	0.54	-0.02	-0.15	-0.18	1.76	-0.96
Gb_22158	-0.65	-0.04	-0.52	-0.27	-0.28	-1.6	-1.55	0.51	0.37	0.32	0.96	0.08	-0.22	-0.12	0.84	0.18	0.72	-0.44	-0.44	-0.78
Gb_22225	0.77	-0.53	0.51	0.56	0.14	-2.89	-0.32	-0.1	-0.38	-0.05	0.72	-0.3	-1.09	-1.37	0.66	0.35	0.25	-0.63	0.66	-1.33
Gb_22248	-0.45	-	-1.61	0.01	1.31	-5.63	-1.6	-0.6	-1.22	-1.03	0.9	0.2	1.52	1.35	1.35	-	0.17	-1.53	-1.46	-0.52
Gb_22371	-0.15	-0.46	-0.25	0.08	0.03	-1.08	-1.51	0.47	0.35	0.26	0.85	0.16	-1.02	-0.9	0.77	-0.13	0.55	-0.07	0.13	-0.51
Gb_22664	-	-	-	-0.18	-	-	-	0.95	-1.39	-1.75	-1.49	-	3.11	2.72	-0.17	-	-	-	-	-
Gb_23169	-0.54	-	-1.42	-2.82	-0.47	-	-2.75	1.65	0.16	-2.07	1.74	-4.13	1.42	1.4	1.25	-0.35	0.51	-15.36	-2.72	-
Gb_23713	0.3	1.45	1.53	-	1.08	-1.16	-	-0.4	-0.46	-1.19	-0.43	-0.71	-1.36	-1.46	-0.58	-0.18	-0.54	0.62	0.96	-0.28
Gb_23716	-0.05	0.04	0.84	1.63	0.54	-0.93	-1.75	-0.01	-1.03	-0.77	0.42	-1.3	0.36	0.64	0.06	-0.6	0.34	-0.45	-1.79	-2.27
Gb_24819	-	1.45	-	-	-	-	-	1.31	-	-	1.96	-	2.49	1.27	1.07	-	-	-	-0.34	-16.26
Gb_25642	0.97	0.01	0.71	0.88	0.5	-1.48	-1.65	0.45	-0.0	-0.69	0.6	-0.8	-1.84	-1.53	0.73	-0.39	-0.7	0.34	-0.25	-0.7
Gb_26296	0.67	-0.55	0.81	1.13	0.15	-1.85	-1.13	0.06	-0.31	-0.28	0.32	-0.18	-1.67	-1.59	0.15	0.13	0.24	-0.23	0.53	-0.29
Gb_26432	-1.57	0.04	-0.75	2.37	1.0	-1.59	-2.5	-0.55	-1.13	-1.75	-1.87	-2.62	-0.55	-0.16	-2.34	-0.25	-0.06	1.05	1.33	-1.61
Gb_26444	0.32	0.03	0.4	0.17	0.26	-1.29	-0.97	0.06	-0.29	0.03	0.67	-0.64	0.12	-0.06	0.42	-0.86	-1.25	0.44	0.48	-0.09
Gb_27440	0.35	-0.11	0.47	0.2	0.62	0.7	-1.6	0.37	-0.18	-0.91	0.11	-1.57	0.38	0.04	0.78	-1.13	-2.12	0.12	-0.28	0.02
Gb_27757	-0.2	-	-9.64	-	-22.01	-	0.33	0.39	-0.13	-0.21	1.59	0.11	1.68	1.45	0.82	0.21	-0.9	-6.36	-	0.36
Gb_27898	-5.52	-	-	-	-	-	-5.62	4.32	-	-	-	-	-	-	-	-	-	-	-	-
Gb_27903	-6.21	-	-	-0.03	-	-	-6.3	4.25	-	-	-	-	-	-	-	-	-	-	-	-
Gb_28320	-4.81	-	-	-	-	-	-	2.21	-	-	1.52	-	1.74	1.92	2.41	-	-	-	-5.69	-
Gb_28366	-	-	-	-	-1.24	-	-3.64	1.85	1.08	-11.07	2.25	1.22	-1.73	-1.2	0.39	-0.17	-5.06	-0.7	0.69	0.56
Gb_28388	-	-	-	-	-	2.26	-	-0.34	-	-	0.92	-	-0.07	-	3.25	-	-	-	1.03	-
Gb_29234	0.55	-2.23	-0.45	-0.11	0.76	0.54	-0.93	-0.04	-1.96	-1.61	-0.41	-1.05	-1.3	-0.24	-0.47	0.33	0.64	0.57	1.49	0.16
Gb_29402	-4.45	-	-	-5.72	-8.92	-4.85	-	1.53	0.89	0.63	2.66	-1.13	-2.68	-2.12	2.07	-0.07	0.21	-4.82	-5.91	-3.78
Gb_29412	-3.66	-	-	-0.02	0.84	-0.99	-8.69	1.05	-23.44	-2.49	-0.27	-25.35	2.52	2.2	-0.3	-	-	-2.26	-0.78	0.71
Gb_29766	0.37	0.32	0.81	0.55	0.15	-0.69	-0.04	0.1	-0.07	-0.31	0.18	-0.45	-1.07	-1.35	0.41	-0.42	-0.2	0.11	0.46	-0.83
Gb_30099	-	1.8	-	-	2.83	0.82	-	-0.56	-1.25	-2.4	-2.78	-0.29	-4.07	-	-1.29	0.02	0.22	-0.26	0.95	-
Gb_30525	1.51	-14.75	-12.33	-9.44	-1.12	-0.29	1.12	1.95	1.08	-2.26	-6.97	-0.12	0.28	0.28	0.91	-6.76	-0.92	0.49	-1.59	-30.75
Gb_30923	1.52	-0.84	0.9	0.12	1.11	-0.86	-0.16	0.11	-0.86	-1.13	0.18	-1.38	-2.15	-2.59	-0.33	-0.44	-0.29	0.39	0.15	0.32
Gb_31195	-0.19	0.54	-1.37	1.34	-1.79	-	-3.56	0.36	-1.24	-0.29	-0.41	-1.4	1.36	-0.09	-1.13	1.21	0.78	0.36	0.53	-
Gb_31722	1.61	0.64	0.63	1.18	0.84	1.78	-	-0.05	-2.21	-	-1.62	0.13	-	-	1.17	-	-	-0.11	-2.06	-1.61
Gb_32005	-0.04	1.05	-	0.97	-	-2.39	-4.06	0.9	-3.81	-4.45	2.13	0.86	0.45	-5.24	-0.47	-0.81	0.79	-	1.09	-
Gb_32112	0.72	-0.55	-1.23	0.27	-1.45	-0.27	-1.59	0.56	-0.54	-1.55	-1.07	-0.6	-20.35	-1.25	-1.39	2.22	1.97	-0.14	-1.06	-3.41
Gb_32460	-	-	-	-	-	-	-	2.62	-2.99	-	3.34	-0.98	-	-	1.63	-	-	-	-	-
Gb_34314	-0.09	-0.26	-	2.26	-1.45	-	-2.31	0.72	-2.99	-2.31	1.5	-	1.69	-0.09	1.17	-0.76	-	-	0.05	-
Gb_34337	0.84	0.04	-0.01	0.63	0.77	-0.78	-0.66	0.09	-0.46	-0.75	0.32	-0.48	-1.84	-1.83	0.53	-0.65	-0.9	0.56	0.44	0.45
Gb_35085	-	-	-	-	3.11	-	-1.99	1.46	-0.16	-	0.37	-	-0.24	-	2.11	-	-	-	0.0	-
Gb_35546	-0.46	0.5	-0.84	-2.96	-0.26	0.2	0.64	0.03	-0.09	-0.15	0.45	-1.58	0.05	-0.01	0.33	-0.54	-0.33	-1.19	-1.29	1.78
Gb_35682	-	-	-	-	1.69	-	0.16	0.41	0.42	-0.63	-2.27	-5.2	0.65	-0.62	1.96	-	-0.15	-	1.74	0.79
Gb_35704	-2.34	2.77	-0.5	-16.39	-0.47	-0.35	-	0.68	-0.63	-0.98	-0.69	-1.83	1.64	1.3	-0.01	-	-	-	-0.81	-
Gb_35849	0.96	1.77	1.43	0.93	0.86	-1.12	0.1	-0.18	-1.15	-0.46	-0.15	-7.57	-2.73	-	-1.05	-1.45	-2.57	-1.94	0.95	-1.44
Gb_35850	-10.3	1.68	0.36	0.36	-8.89	-1.87	-3.58	-0.28	-	-	0.75	-3.15	-5.62	-3.14	-0.56	-2.75	-3.43	1.56	2.86	-
Gb_36098	-6.87	-	-	-	-	-	-	0.9	-	-	0.52	-	2.52	3.09	-0.34	-	-	-	-	0.71
Gb_37150	-2.02	-	-	-	-	-	-1.47	1.45	-0.25	0.77	2.25	-	-0.32	1.97	0.54	-23.11	-1.36	-	-	1.48
Gb_37197	0.3	-3.14	-0.06	0.31	0.58	-0.64	-1.21	0.37	-0.77	-0.8	0.96	-0.59	-1.96	-1.07	0.63	0.15	0.58	0.12	1.1	-0.5
Gb_37895	-	-	-	-	-	-	-	1.48	-	-	2.65	-	-	-	3.45	-	-	-	-	-
Gb_38196	1.81	-1.01	1.4	1.53	0.92	-2.71	-0.74	-0.11	-1.23	-0.84	-0.09	-1.55	-1.82	-1.67	0.15	-1.47	-1.46	0.09	-0.92	-0.73
Gb_38229	-8.24	-	-	-	-	-	0.73	2.6	1.39	-7.72	2.2	0.69	-1.54	-	-1.01	-	-	-	1.39	-
Gb_39111	0.1	0.51	1.39	1.72	-1.15	-	-0.19	-1.67	-0.77	-0.2	-2.33	-4.25	-	-3.81	-0.06	-0.28	0.17	0.71	1.86	-
Gb_39125	-0.15	0.95	-	-	-0.45	-1.55	-1.76	0.91	1.22	0.29	0.09	-1.22	1.51	1.11	0.06	-0.28	0.74	-4.16	-1.83	-10.66
Gb_39617	0.73	1.33	0.49	-	1.06	-1.96	-	-0.3	0.21	-0.67	-0.28	-1.69	-0.57	-0.62	-0.05	-0.13	-0.59	0.65	1.2	-0.69
Gb_39876	-0.29	-0.22	-0.11	0.18	0.39	0.17	-1.01	0.24	-0.56	-0.79	0.26	-0.71	-0.88	-0.81	0.31	-0.3	-0.26	1.15	1.09	-0.44
Gb_40181	-0.03	0.89	-0.65	0.19	0.45	-0.63	-1.04	0.18	0.04	0.3	0.78	-0.45	0.12	-0.39	0.52	0.51	-0.28	-0.9	-0.19	-3.33
Gb_40575	-8.72	-	-5.05	-4.88	-2.83	1.11	-4.25	1.8	1.48	1.22	-10.28	-17.69	1.59	2.1	0.52	-15.42	-14.36	-1.98	-8.46	-6.92
Gb_40826	-	-	-	-	-	-	-	-2.07	-	-	-	-	-	4.3	-	-	-	-	-	-
Gb_40992	-	-	-	-	-	-	-4.67	0.77	-1.45	-1.95	1.27	-27.22	2.04	2.47	1.67	1.25	-19.35	-	-	-
Gb_41522	0.29	-0.57	0.78	1.85	0.88	-2.05	-1.16	-1.59	-2.8	-2.3	-	-0.04	-2.46	-2.94	-	-2.29	-4.2	1.39	2.24	-0.52

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.