Heatmap: Cluster_80 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	Ovule	Ovule, mature	Ovule, pollinated	Strobilus, female	Ovulate strobilus	Microstrobilus	Kernel	Leaf	Leaf, female	Leaf, male	Leaf, salicylic acid	Leaf, seedling	Leaf, truncation control	Leaf, truncation treatment	Leaf, water	Yellow-green stripe leaves	Green leaves	Stem	Cambium	Root
Gb_00104	0.86	-2.14	0.95	0.4	0.38	-2.04	-1.06	1.23	-0.47	-1.28	0.21	0.76	-0.34	-0.42	-0.25	-1.9	-1.27	1.18	-0.17	-2.93
Gb_00177	-1.94	-1.78	-2.36	-0.52	-0.78	-0.52	-1.63	0.33	0.42	0.3	-0.11	0.32	0.26	0.31	0.09	0.73	0.17	0.47	1.51	-1.13
Gb_00686	-0.05	0.04	0.15	-0.27	0.5	0.19	-0.33	-0.06	-0.74	-0.51	0.12	-0.7	-2.02	-1.58	-0.08	0.02	0.55	0.63	0.85	0.49
Gb_00687	-0.21	0.25	0.62	0.26	0.31	0.06	-0.6	0.01	-0.83	-0.97	0.0	-0.82	-1.7	-1.7	0.17	-0.4	0.38	0.65	0.98	0.38
Gb_01166	0.25	-0.05	-1.14	-0.18	0.36	-2.5	-0.54	-0.25	0.75	0.46	-0.54	-0.72	0.07	1.22	-0.08	0.51	-0.37	0.86	-1.61	-1.01
Gb_01880	-0.03	-2.03	-2.72	0.23	0.1	-1.51	-6.94	1.12	0.78	0.58	-	-	-2.61	-2.26	-	0.51	0.18	2.35	1.38	-7.76
Gb_01884	1.52	1.55	1.33	1.5	1.24	0.46	-5.34	0.14	0.03	0.0	-	-	-	-	-	-	-	0.96	-6.29	-7.03
Gb_02387	-0.58	0.45	-0.73	-1.35	-0.31	-0.8	-0.49	0.34	0.34	0.07	-0.66	-0.11	0.62	0.18	-0.38	0.02	0.08	0.06	1.21	-0.17
Gb_03793	-1.01	-1.32	-0.91	0.18	-0.23	-0.81	-2.56	0.85	-0.25	-0.72	-0.39	-2.26	0.6	-0.45	-0.27	-1.12	0.13	1.24	1.91	-0.21
Gb_04061	0.53	0.61	0.51	-0.07	0.12	-1.61	0.52	0.07	-0.04	-0.2	0.15	-0.75	-0.6	-0.93	0.24	-0.0	-1.08	0.03	0.7	-0.47
Gb_04163	0.31	0.2	0.1	0.25	0.28	-1.64	-0.14	0.05	0.25	-0.08	0.04	-0.88	-0.4	-0.52	-0.05	0.03	-0.05	0.21	0.83	-0.28
Gb_04432	0.28	-0.98	-0.65	0.37	0.34	0.63	-1.19	0.01	-0.46	-0.95	-1.2	-0.79	0.46	0.24	-0.96	0.28	-0.8	0.77	1.34	-0.46
Gb_05126	-2.4	-1.4	-3.52	-0.44	0.43	-0.06	-1.91	-0.24	-0.3	-0.28	0.77	-0.63	-0.54	-0.58	0.9	0.88	0.41	0.49	1.58	-1.28
Gb_05141	-0.52	0.82	-0.27	-0.29	0.06	0.85	-2.2	0.16	0.33	0.58	-0.44	-0.4	-0.23	-0.45	-0.25	0.97	-0.25	0.6	-2.77	-0.8
Gb_05803	-0.24	-0.25	-1.02	0.22	0.36	-2.12	-0.74	0.34	0.07	-0.06	-0.02	-1.19	0.67	0.32	0.03	-0.43	-0.84	0.63	1.5	-1.76
Gb_07308	-0.24	-1.06	-0.41	0.81	0.09	-0.54	-0.87	0.63	0.24	0.29	0.15	-0.15	0.82	0.1	0.03	-0.74	-0.51	0.49	0.1	-1.91
Gb_07309	0.37	-2.02	0.38	1.02	0.13	-0.85	-0.46	0.57	0.26	0.4	0.28	-0.63	0.13	-0.28	0.29	-1.59	-1.16	0.81	-0.28	-1.29
Gb_07310	-0.2	0.65	1.08	0.3	-0.1	-1.29	-0.99	0.38	0.05	-0.04	0.78	-0.83	0.31	0.02	0.29	-0.25	-0.9	-0.14	-0.38	-2.0
Gb_07314	-0.51	-0.84	0.47	0.64	-0.44	-1.18	-1.46	0.45	0.36	0.54	0.83	-0.34	0.3	-0.38	1.13	-1.1	-0.54	0.23	-0.51	-1.39
Gb_08676	0.25	0.86	0.19	0.25	-0.28	-1.78	-0.25	0.19	-0.16	-0.38	-0.08	0.02	0.06	0.26	-0.38	-0.52	-0.03	0.0	-0.78	0.74
Gb_08677	0.39	0.49	0.73	0.95	-0.35	-2.43	-0.76	0.5	-0.4	-0.92	-0.16	0.23	0.48	0.34	-0.28	-0.43	0.23	-0.21	-0.75	-0.97
Gb_09195	-1.61	-0.3	0.32	0.05	0.65	-0.29	-0.85	0.68	-0.56	-0.36	-0.0	0.8	-0.6	-1.06	-0.37	0.28	0.12	1.08	0.3	-1.94
Gb_09291	-2.74	-2.83	-2.56	-1.12	0.03	1.04	1.07	0.72	-1.4	-1.95	-0.87	-0.54	-0.22	-0.37	-0.57	-2.25	-1.5	1.1	2.24	-0.62
Gb_09619	0.84	-0.33	0.12	0.71	0.74	0.08	-1.04	0.2	-0.75	-0.46	0.19	-0.09	0.21	0.35	-0.15	0.06	-0.42	-0.09	-1.21	-1.21
Gb_09643	-0.32	-0.64	-1.04	0.28	-0.07	-0.71	-0.21	-0.15	0.45	-0.04	-0.77	-0.52	0.14	0.62	-0.85	0.62	0.36	1.23	-0.21	-0.56
Gb_10138	-1.37	-1.81	-3.9	0.19	-0.36	0.78	-1.82	0.5	-0.86	-0.72	-0.04	0.57	-1.14	-1.06	-1.04	1.04	0.85	1.66	-0.18	-0.03
Gb_10889	-1.33	-1.89	-2.46	0.92	-0.02	-2.1	-3.34	2.11	1.72	1.47	-	-	-	-	-	-	-	2.46	-	-4.65
Gb_11251	-1.25	-1.44	-1.99	-1.24	-0.23	-0.4	-1.51	0.71	0.07	0.59	-0.26	-0.16	0.82	0.18	-0.12	-0.36	0.35	0.73	1.21	-0.33
Gb_11856	1.35	0.72	0.92	0.37	-0.75	-2.16	-	0.31	0.62	-0.8	0.47	-1.42	0.64	1.81	-1.58	-1.19	-0.39	-	-3.88	-
Gb_12581	1.92	-0.07	-0.14	1.66	1.63	0.29	-2.39	0.29	0.5	0.7	-	-9.42	-8.86	-	-	-7.18	-7.35	1.25	-7.09	-6.74
Gb_12602	-0.22	-0.31	0.01	-0.13	0.18	0.12	-0.76	0.08	-0.6	-0.47	-0.3	-0.54	-0.47	-0.52	-0.04	-0.32	-0.16	0.78	0.94	0.96
Gb_12660	0.32	-2.38	-2.72	-0.55	-2.44	-6.08	-8.41	0.89	0.1	0.17	-0.22	1.63	-0.8	-0.62	-0.35	0.11	1.27	1.12	-7.35	0.88
Gb_12671	1.11	-1.52	0.58	1.77	0.04	-4.88	-9.34	1.11	-2.78	-9.88	-1.24	-20.68	0.56	0.64	-0.03	-	-	2.25	-7.09	-7.38
Gb_12778	-2.92	-3.12	-2.78	-2.42	-2.75	-4.16	-	1.17	0.59	0.39	-0.95	-4.11	0.07	0.24	-1.26	0.79	2.07	1.71	0.57	-1.95
Gb_14035	-0.12	0.46	0.23	0.06	0.06	0.28	-1.73	0.15	-0.25	-0.45	-0.76	-0.47	-0.66	-0.61	-0.53	0.45	-0.0	0.69	1.15	-0.39
Gb_14036	-0.14	0.13	0.07	-0.25	0.02	0.09	-1.79	0.15	-0.07	-0.37	-0.51	-0.55	0.34	0.5	-0.48	0.6	-0.07	0.7	0.33	-0.38
Gb_14303	-0.36	1.39	-0.72	2.25	0.25	-0.0	-8.69	0.37	-0.56	-0.73	-1.44	-2.87	-0.53	-0.79	-2.54	-2.26	-1.24	1.73	-3.84	-0.98
Gb_14780	-2.32	-2.7	-4.84	-1.57	-0.07	2.2	-	-0.37	0.64	0.38	0.31	-0.98	-1.32	-0.41	0.48	0.15	0.87	-1.82	-0.9	1.03
Gb_15091	-2.71	-4.02	-1.56	-1.12	-2.58	2.54	-	0.56	-0.54	-0.42	-2.33	-2.14	0.02	-0.85	-3.6	1.94	0.67	0.32	-5.75	0.44
Gb_15549	0.38	0.35	0.21	0.26	0.19	-0.87	-0.08	0.17	0.2	-0.11	-0.03	-0.8	-0.21	-0.35	-0.14	0.09	-0.37	-0.02	0.89	-1.1
Gb_16263	0.34	-1.11	0.4	-1.9	-0.11	-3.74	-1.86	-0.96	-0.83	-0.92	-1.46	1.83	-3.98	-3.55	-1.66	0.55	2.37	-2.38	-1.11	1.11
Gb_17416	-0.41	0.01	-0.58	-0.43	-0.37	-0.47	-0.98	0.74	0.02	0.13	-0.39	-0.41	0.58	-0.17	-0.12	-0.87	-1.19	1.18	1.3	-0.95
Gb_17818	-2.45	-4.78	-3.22	-1.5	-1.48	-0.59	-3.32	0.85	0.12	0.2	-0.48	-1.18	0.6	0.82	-0.39	-3.57	-0.86	1.62	1.87	0.68
Gb_19178	-3.01	-3.77	-5.27	-2.49	-2.23	-0.51	-0.47	1.07	0.44	0.29	-0.79	-2.06	0.66	0.58	-1.42	0.22	0.61	1.51	1.59	-1.13
Gb_19542	-0.69	0.87	0.39	-0.59	0.07	-0.69	-0.19	0.12	0.47	0.51	0.04	0.33	0.33	-0.47	-0.26	-1.51	-1.1	-0.38	0.9	-0.82
Gb_20329	-2.44	-	-	-0.99	-0.25	0.69	-3.43	0.72	-0.3	-0.29	-0.19	0.38	0.17	-0.18	0.42	-1.41	0.22	0.8	1.84	0.12
Gb_20778	-0.32	0.45	0.23	0.25	-0.04	0.6	-1.3	0.01	0.45	0.07	0.02	-0.25	-0.39	-0.53	0.15	0.21	-0.59	0.74	-1.25	-0.29
Gb_21794	0.3	0.36	1.0	-	-2.04	-	-2.28	-0.36	-0.58	-0.91	1.96	-2.02	0.84	0.56	1.29	-0.17	0.78	-3.3	-	-1.03
Gb_23046	-0.64	-0.21	-0.54	-0.29	0.16	-1.22	-1.38	0.01	0.13	0.03	0.23	-0.22	-0.39	-0.54	0.22	0.24	0.03	0.33	1.45	0.13
Gb_23398	0.46	-1.29	-2.96	1.89	0.33	-5.05	-1.39	1.02	-0.93	-0.52	0.13	-0.53	-0.57	-1.19	-0.29	-0.33	-0.2	1.39	0.42	-3.04
Gb_23423	0.54	0.74	0.27	0.89	0.51	-0.07	-1.13	-0.4	-0.81	-0.93	-2.11	-1.28	0.49	0.49	-1.6	-0.83	-1.57	0.0	1.25	0.11
Gb_23717	-0.05	0.56	-0.1	0.12	0.26	-0.86	-0.6	0.14	-0.06	-0.31	-0.2	-0.79	-0.09	0.07	-0.02	0.36	-0.23	0.33	0.72	-0.32
Gb_24071	-0.64	2.55	-1.38	0.57	0.57	-2.57	-6.28	0.62	-0.27	0.3	-1.27	0.25	0.63	-0.08	-3.05	-1.15	-0.69	0.04	-	-4.28
Gb_24368	0.3	1.06	0.6	-0.64	0.19	-2.09	0.74	-0.42	0.47	-0.07	0.3	-2.14	-1.52	-1.33	0.56	0.2	-1.05	-1.17	1.17	-1.3
Gb_24369	0.2	0.74	0.46	0.33	0.53	-2.53	0.67	-0.57	0.32	-0.03	0.64	-2.5	-0.3	-0.49	0.66	-0.22	-1.19	-1.49	0.6	-1.24
Gb_24842	-	-	-2.84	-	0.65	1.14	-2.64	0.79	-0.22	0.08	-0.74	-0.62	0.26	0.09	-0.88	0.3	-0.77	0.32	2.31	-2.18
Gb_25113	0.7	-0.15	0.26	0.55	-0.43	1.03	-7.36	-0.17	0.34	0.41	0.14	-0.39	0.03	-0.17	0.13	-0.44	-1.03	0.37	-0.75	-0.83
Gb_25313	0.67	1.42	0.75	-0.19	0.25	-3.43	-1.24	0.49	0.46	0.3	0.23	-0.33	-0.5	-1.64	0.05	0.25	0.31	-1.31	-1.33	-2.44
Gb_25784	-2.2	-5.16	-4.58	-1.52	-1.17	0.67	-3.66	0.88	0.19	-0.05	-1.1	-0.34	-0.02	0.07	-1.23	-0.52	2.46	1.16	-0.99	-0.62
Gb_25918	-1.83	-1.71	-1.68	-0.97	0.54	2.03	-1.58	-0.5	-0.36	-0.14	0.43	0.6	-0.11	0.27	0.45	-1.28	-1.82	-0.56	0.36	0.4
Gb_26160	0.28	0.06	-0.49	0.23	0.46	-0.48	-1.28	0.22	0.06	-0.24	-0.08	-0.18	0.7	0.45	-0.21	-0.96	-1.47	1.0	-0.03	-0.39
Gb_26161	0.5	0.39	-0.21	-0.22	0.66	-0.16	-1.29	0.08	0.07	-0.18	-0.44	0.06	0.27	0.14	-0.56	-0.72	-1.49	1.13	0.21	-0.73
Gb_26315	-0.51	0.35	0.45	0.47	-0.33	-0.17	-1.33	0.16	-0.57	-0.48	0.73	-0.75	0.26	-0.02	0.8	0.01	0.31	-0.23	-0.48	-0.54
Gb_27777	-0.94	-0.19	-0.76	-0.89	-0.14	1.72	-0.87	0.01	0.4	-0.13	0.34	-0.36	-1.12	-0.54	0.13	0.26	-0.09	0.03	-1.18	0.68
Gb_27779	0.5	1.69	1.31	0.19	0.95	-3.35	-0.57	0.45	0.41	0.22	-0.05	-0.6	-0.3	-1.15	-0.45	-0.74	-2.99	-0.55	-3.95	-3.31
Gb_27785	0.96	1.16	0.7	-0.1	0.07	-1.26	-0.51	0.26	0.37	0.53	0.32	-0.27	0.74	0.17	-0.14	-1.96	-1.18	-1.37	-5.57	-1.87
Gb_28489	0.57	-3.58	0.06	-0.23	-0.69	-0.09	0.74	0.86	-1.63	-1.53	-0.1	0.6	-0.72	-0.25	-1.25	-0.61	-0.49	1.71	-0.25	0.02
Gb_28563	-0.45	-0.69	-1.12	-0.54	-0.2	-0.1	-0.54	0.04	0.45	0.15	-0.34	-0.23	0.14	0.28	-0.01	1.0	0.61	1.0	-0.99	-0.97
Gb_29955	-2.54	-3.16	-2.61	-0.07	-0.6	-0.25	-1.51	0.77	0.44	0.01	0.78	-0.68	-0.06	0.49	0.66	0.71	1.11	1.06	-2.67	-1.45
Gb_30101	-0.82	-1.19	-0.43	0.49	0.04	0.97	-3.06	0.9	-1.3	-0.88	-1.31	0.99	-0.9	-0.86	-1.28	-0.16	0.7	1.83	-2.18	-0.44
Gb_30130	-0.49	0.04	0.75	-1.65	-0.28	-3.42	0.03	-0.12	1.04	1.15	-0.44	-0.09	-0.24	-0.7	0.16	-0.01	-1.97	-0.54	1.04	-0.17
Gb_30604	1.1	1.18	1.21	0.9	0.93	-0.01	-3.37	0.57	0.37	0.28	-	-8.61	-2.26	-2.13	-	-0.84	-0.45	1.16	-1.2	-4.63
Gb_30605	0.39	0.22	1.05	1.61	0.57	0.56	0.24	0.72	0.21	0.5	-4.69	-7.45	-3.47	-3.0	-4.27	-0.91	-0.18	0.63	-0.85	-2.31
Gb_30665	-0.4	0.24	-0.89	-0.28	-0.2	-0.37	-0.69	0.2	0.07	-0.2	-0.31	-0.55	0.11	0.11	-0.05	0.88	0.28	0.99	0.24	-0.96
Gb_32230	0.47	0.62	0.3	0.19	0.64	-1.29	-0.64	0.25	-0.06	-0.47	-0.39	-0.45	-0.55	-1.17	-0.39	-0.52	-0.93	0.67	1.1	-0.19
Gb_32391	1.16	1.14	0.99	2.03	0.9	0.7	-	0.5	-0.01	-0.44	-	-	-	-	-	-	-	1.5	-	-
Gb_32578	-0.31	-0.11	-0.6	-0.37	-0.19	-0.17	-0.48	0.15	0.24	-0.05	-0.38	-0.46	0.06	0.03	-0.26	0.8	0.53	0.96	0.18	-1.17
Gb_32779	0.4	-0.05	0.23	0.93	0.09	0.08	-1.99	0.34	-0.33	-0.04	0.56	-0.44	-0.02	-0.15	0.41	-0.53	-0.46	0.53	-2.72	-0.38
Gb_33643	-0.36	0.33	-0.38	0.73	-0.25	-1.47	-1.47	-0.07	0.6	0.03	-1.16	-1.74	0.02	-0.03	-0.74	1.22	0.18	0.69	0.59	-0.79
Gb_34655	-	-	-	-	-0.54	1.64	0.59	1.6	-2.53	-1.19	1.67	-	-0.15	-0.27	1.75	-1.26	-0.92	0.47	-	-1.22
Gb_35091	0.07	0.04	-0.08	0.13	0.07	-0.18	-0.28	0.06	0.02	-0.26	0.24	-0.68	-0.06	-0.07	0.12	-0.36	0.1	-0.22	0.87	-0.17
Gb_35346	-0.37	-0.16	-0.72	0.29	-0.26	-0.71	-0.63	0.55	0.12	-0.06	-0.33	-0.59	0.71	0.14	-0.12	-0.84	-1.31	1.19	1.03	-1.02
Gb_35347	0.04	-0.45	-1.15	-0.61	-0.1	-0.52	-0.87	0.51	0.3	0.37	-0.77	-0.39	0.45	0.12	-0.06	-1.06	-1.26	1.21	0.96	0.12
Gb_36541	0.57	-0.03	0.51	0.48	0.06	-0.88	0.19	0.09	-0.1	-0.12	-0.1	-0.09	0.46	0.43	-0.29	-0.45	-0.86	0.44	-0.64	-1.36
Gb_37899	-0.27	0.51	-0.58	-0.01	-0.2	-0.05	-0.5	0.24	-0.02	-0.28	-0.59	-0.46	-0.89	-0.8	-0.31	0.47	0.12	1.04	1.19	-1.21
Gb_38920	1.23	-0.11	1.02	1.59	0.68	-0.26	-4.42	0.85	0.21	0.02	-	-8.38	-0.79	-2.3	-	-0.34	-0.06	1.09	-0.84	-
Gb_38922	1.31	-0.98	0.33	1.66	0.6	-0.73	-4.8	0.62	0.46	0.21	-5.07	-4.28	-0.24	-1.9	-	0.28	0.61	1.14	-2.34	-4.82
Gb_38924	1.2	-1.39	-0.16	0.65	0.08	0.22	-2.32	0.8	-0.13	-0.12	-	-3.54	0.51	0.35	-	-0.14	-0.47	1.56	0.58	-
Gb_39110	-3.35	-	-	-1.06	-1.35	-0.87	-2.56	1.22	0.07	-0.03	-0.16	-5.08	0.46	-0.6	-0.7	0.16	0.25	1.62	2.32	-5.55
Gb_41547	1.31	0.67	0.84	0.27	0.95	-0.25	-	0.74	0.67	0.53	-	-	-	-	-	-5.06	-5.23	2.13	0.01	-5.61
Gb_41562	-0.66	1.84	0.44	1.09	-0.69	-2.2	-	0.7	0.22	0.92	0.25	-0.49	0.34	-0.06	-1.08	-0.85	-1.56	0.36	-	-
Gb_41617	-0.14	0.13	-0.42	0.36	0.25	-0.04	-1.37	0.46	-0.37	-0.46	0.24	-0.24	0.57	0.46	0.23	-0.16	0.09	0.31	-0.67	-0.61

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.