Heatmap: Cluster_24 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule
Ovule, mature
Ovule, pollinated
Strobilus, female
Ovulate strobilus
Microstrobilus
Kernel
Leaf
Leaf, female
Leaf, male
Leaf, salicylic acid
Leaf, seedling
Leaf, truncation control
Leaf, truncation treatment
Leaf, water
Yellow-green stripe leaves
Green leaves
Stem
Cambium
Root
0.53 0.08 -0.26 0.35 0.72 -1.48 -0.39 -0.19 -0.71 -1.02 -0.11 -0.28 -0.05 -0.11 -0.02 -0.32 -1.0 0.46 0.4 1.0
-0.63 -0.37 -0.32 -0.11 0.01 0.66 -0.44 0.18 -0.86 -0.75 -0.97 0.1 -0.22 -0.22 -0.69 -0.85 0.06 1.39 1.1 -0.05
- - - - - 3.17 2.12 -2.08 - - - - - - - - - - - 2.68
0.27 1.41 -0.18 -0.21 -0.48 1.81 0.78 -1.31 -3.11 -2.67 -3.14 -2.66 -2.41 -1.91 -2.54 -1.63 -3.1 0.99 2.03 -1.43
0.1 1.53 0.03 -0.01 -0.37 1.69 0.57 -1.37 -3.31 -3.15 -2.77 -2.83 -2.11 -1.68 -2.26 -1.72 -3.02 1.07 2.01 -1.62
-2.2 -2.18 -1.09 0.5 2.2 -1.27 -8.61 0.4 -8.89 -9.77 -7.0 -2.91 -10.96 -9.52 -6.07 -4.05 -2.54 2.81 1.79 -0.97
- - - - - - - - - - - - - 4.32 - - - - -11.06 -
0.58 -0.89 -0.52 -0.21 0.73 -0.35 -0.16 -0.2 -0.63 -0.78 0.75 -0.3 -1.49 -1.9 0.74 -0.27 -0.5 0.41 0.61 0.84
0.55 - 0.63 1.15 0.4 - -1.56 0.49 0.34 0.49 -1.94 -3.08 1.27 0.16 -3.06 -0.85 -0.46 0.7 -2.85 0.97
-0.1 0.31 1.36 -0.02 1.18 -3.58 -4.9 -0.19 -0.17 0.16 -1.39 -0.36 0.78 0.24 -0.3 -1.76 -0.77 -6.43 -5.02 1.68
- - - - - -3.53 3.19 -4.92 - - -3.77 -4.09 -1.37 -3.23 - - - - -3.64 3.33
- - - - - -1.75 2.55 -3.53 - - -1.99 -2.32 0.41 -1.45 - - - - 1.4 3.17
-1.56 -1.77 -1.9 -0.53 1.04 2.08 0.9 -0.61 -4.08 -3.49 -1.5 -3.0 -2.32 -0.84 -0.71 -2.01 -1.48 1.3 1.18 1.19
0.47 -0.02 0.09 0.65 0.55 -0.76 0.24 -0.72 -0.48 -0.74 0.47 -0.44 -1.14 -1.72 0.54 0.13 -0.37 0.22 0.16 0.42
0.29 -0.24 -0.38 -0.39 1.23 0.87 -0.16 -0.04 -1.25 -1.18 0.01 -0.51 -1.23 -1.28 0.01 -0.52 -0.06 0.81 0.23 0.42
0.5 0.16 -0.11 -0.47 0.77 0.44 -0.11 -0.32 -0.87 -0.94 -0.06 0.1 -1.4 -0.82 0.09 -1.04 0.16 0.69 -0.38 0.96
0.22 -1.94 -0.61 1.68 1.8 1.92 -4.69 -0.81 -6.04 -5.77 -3.25 -2.95 -3.41 -3.22 -2.73 -1.37 -1.7 1.98 0.27 -1.32
0.26 -0.02 0.31 - 0.71 - 0.21 0.31 0.29 0.03 -0.24 -0.49 0.55 0.11 0.75 -2.47 -1.65 0.57 -1.94 1.18
-2.44 - - - 0.03 0.01 -3.28 -0.04 -0.19 -1.07 0.48 -0.04 1.02 0.97 0.25 -0.49 -0.62 1.42 -0.07 1.5
-1.96 0.64 -0.58 0.68 -2.62 1.78 0.8 -4.62 - - - -5.2 -6.25 -5.54 - - - -0.13 -4.37 3.25
0.77 0.58 1.22 0.85 0.1 1.05 -0.22 -0.66 -1.47 -1.09 -1.67 -1.63 -1.24 -1.16 -0.63 -1.23 -1.34 0.74 0.68 -0.04
1.12 1.02 0.99 0.44 0.3 0.67 0.44 -0.69 -1.15 -1.32 -1.09 -1.81 -4.15 -3.03 -0.51 -0.78 -1.47 0.63 0.32 0.5
-0.43 1.22 -0.79 0.05 2.57 -3.19 -3.38 -1.61 -7.81 -8.64 - -4.35 -9.27 -3.49 -7.13 -0.34 -3.13 2.94 - -3.51
-0.24 - - - 0.46 0.43 -2.41 0.54 -1.08 -2.0 1.32 0.43 -2.7 - 0.89 - - 1.41 2.32 -0.85
0.19 1.37 0.49 0.14 0.36 -2.14 -0.6 -0.69 -0.97 -0.94 -0.42 -0.69 -0.62 -1.18 -1.58 -2.09 -2.26 1.61 0.19 1.33
-1.05 2.21 0.92 -0.28 1.55 -0.26 -1.6 -3.21 -0.97 -0.42 0.86 -6.04 -4.0 -3.24 1.06 -4.51 -3.72 -1.31 0.4 -0.35
0.8 - 2.15 1.75 0.71 1.1 - -0.35 -2.13 -2.38 -2.15 -1.11 -5.48 -2.91 -5.31 -4.8 -3.77 1.99 -0.92 -
-8.38 - - -5.71 -4.93 -3.54 -0.84 -5.23 -7.62 -7.85 -4.78 -8.92 -10.39 -8.47 -7.6 - - -0.91 2.74 3.59
-10.31 - - -8.63 -4.66 -6.78 0.86 -6.39 -5.35 -5.13 -3.42 -9.9 -8.24 -8.44 -4.0 - - -2.96 2.32 3.68
-0.92 1.12 -1.42 -0.22 0.01 -1.07 1.05 -0.44 -0.99 -1.28 0.05 -1.05 -0.47 -0.07 -0.56 0.94 -0.4 0.4 0.93 0.11
0.41 1.52 1.1 -0.1 0.76 -0.4 0.4 -0.66 -1.21 -1.04 -1.35 -0.32 -1.18 -0.82 -1.2 -1.36 -1.38 0.53 0.0 0.62
0.29 1.69 - -0.36 1.6 0.72 1.52 -2.73 -2.23 -1.84 -2.11 2.23 -3.23 -2.57 - - - - -2.1 0.23
-1.0 -1.54 -0.06 0.55 1.35 2.38 -3.79 -1.12 -1.62 -2.27 -3.98 -3.27 -4.31 -3.55 -3.57 -0.33 -0.71 1.01 1.58 0.13
-0.01 0.72 0.36 1.39 0.63 0.23 0.31 0.11 -0.46 0.1 -0.65 -0.51 -2.09 -1.76 -1.5 -0.85 -0.15 0.26 0.28 -0.99
-0.74 0.9 0.18 -0.28 0.05 0.74 0.1 -0.02 -0.58 -0.73 -0.66 0.15 -1.36 -1.45 -0.59 -0.46 -0.7 0.98 1.0 0.08
0.43 1.8 0.47 0.27 -3.75 -0.92 0.79 -0.1 -0.28 -1.09 -1.47 0.75 -2.73 -2.2 -1.93 0.56 0.18 0.01 -1.72 0.5
0.09 0.69 0.36 -0.31 0.63 1.16 -1.33 0.28 -1.35 -1.38 -1.32 1.14 -1.9 -1.35 -1.66 -0.76 -0.05 1.49 -0.27 -1.82
- - - - - - -2.19 -0.43 0.11 0.51 0.09 2.53 -0.76 0.19 0.54 -4.87 -1.59 -3.65 1.85 1.3
-3.96 -0.99 -2.7 -0.8 -1.4 2.7 1.83 -0.79 -2.7 -2.53 -1.32 -1.25 -0.52 -0.99 -1.1 -2.85 -5.36 0.56 0.41 0.92
0.52 1.77 1.3 0.5 0.42 -1.37 -1.75 -0.37 -0.31 -0.17 -0.99 -0.89 -1.52 -1.63 -0.94 -0.09 -0.46 -0.01 -0.04 -0.09
1.2 1.53 1.2 0.73 0.55 -1.47 -1.75 -0.36 -0.25 -0.42 -1.78 -0.9 -0.92 -0.68 -1.13 -0.25 -0.5 -0.14 -0.68 -0.24
-3.56 - -4.26 0.64 1.29 -1.65 1.39 0.99 -5.44 -6.48 - -4.22 - -6.07 -5.27 -3.22 -4.71 2.98 0.27 0.62
- - - - - - 2.59 -0.81 - - - - - - - 3.01 2.43 - - -
-0.66 0.19 -2.18 -0.27 0.56 0.33 2.1 -1.07 -4.87 - - - -4.66 - -4.48 - - 1.61 1.02 2.16
-0.39 0.67 0.7 -0.34 1.29 -1.26 0.06 -2.11 -3.43 -3.94 -2.14 -1.45 -2.29 -3.65 -1.84 -3.54 -2.47 -0.2 2.7 1.09
0.66 0.15 0.52 1.07 1.09 0.9 -0.34 -0.08 -1.99 -1.43 -1.52 -0.26 -2.02 -1.89 -1.21 -1.81 -1.73 0.96 1.05 -0.51
- - - - - -3.22 -0.02 -1.8 -5.87 -3.21 1.37 1.96 -1.07 0.18 1.44 -3.52 -5.73 -0.04 2.38 0.51
- - - -21.84 - - 0.25 0.63 - - 0.71 -1.46 - - 2.83 - - - 3.03 -
-3.18 -1.31 -2.98 -1.35 - -0.11 - 1.85 -0.75 -0.62 2.01 1.55 0.09 -0.65 1.65 -1.6 -2.22 -0.38 -5.6 -3.67
-2.88 -3.08 -1.9 -0.54 -3.09 -2.98 2.17 -2.7 -3.86 -4.99 -1.13 -0.14 -2.31 -1.57 -1.23 -2.22 - -4.43 -1.41 3.44
0.58 -0.5 -0.89 1.46 0.64 -0.48 0.44 -0.23 0.18 -0.53 -0.61 -0.53 -0.88 -0.93 -0.83 -0.18 -0.51 0.05 1.22 -1.88
- - - - -0.79 -1.89 -0.16 -0.56 -1.62 -0.36 -0.96 1.35 -0.07 0.74 1.2 -3.11 -1.87 0.15 -1.63 2.74
- - - -2.23 -1.42 -1.28 -0.57 1.18 -1.2 -0.39 1.39 0.94 0.3 1.53 1.64 -1.65 -1.17 -3.12 -3.42 1.09
- - - - -2.01 0.61 1.21 -1.26 -1.48 - -1.28 1.9 -1.11 -2.36 -0.29 -0.48 - 0.88 0.05 2.57
0.64 0.26 0.17 0.42 0.94 -0.18 -0.38 -0.09 -0.5 -0.82 -0.81 -0.98 -0.05 -0.31 -1.06 0.12 -1.41 1.03 -0.29 0.43
0.41 1.7 0.37 0.34 0.89 -1.94 -0.81 -0.54 -0.56 -0.36 -0.01 -0.25 -0.06 -0.59 0.3 -1.39 -1.45 0.17 -0.34 -0.56
0.55 -0.41 0.09 0.55 1.02 -0.85 -0.01 0.02 -0.25 -0.63 -0.2 -0.63 -0.66 -1.13 0.26 -1.18 -0.98 0.88 0.24 0.47
- - - - - - - - - - - - - - - - - - 4.32 -
-0.05 0.73 0.95 -0.09 0.54 -0.26 0.25 -0.25 -1.41 -1.18 -0.26 -0.79 -0.19 0.02 -0.53 -0.35 0.02 0.27 -0.23 0.6
- - - - - - - - - - - - - - - - - - - -
0.03 -0.07 -0.19 0.14 0.64 0.51 -0.41 0.1 -0.93 -0.9 0.62 -0.55 -1.82 -1.82 0.72 -0.85 -0.63 0.72 0.36 0.7
-0.83 1.06 -0.85 -0.83 0.27 0.78 0.02 -0.05 -0.86 -0.86 -0.38 0.07 -1.23 -0.78 0.15 -1.16 -1.97 -0.08 1.87 -0.02
-3.16 -2.0 -3.6 -1.98 -2.13 1.88 2.71 -0.64 -0.97 -1.08 -2.44 -0.7 -0.87 -0.6 -2.35 -3.06 -1.4 -0.85 1.81 -1.18
-3.01 -1.48 -3.33 -2.08 -2.3 1.56 2.94 -0.42 -0.56 -0.73 -2.0 0.15 -0.6 -0.1 -1.91 -2.38 -0.74 -1.2 0.6 -1.44
0.68 -4.7 -2.48 -0.46 1.34 0.65 0.2 -0.32 -0.98 -1.47 0.51 0.02 -2.72 -1.73 0.11 -0.82 -1.16 1.6 0.12 0.52
0.38 0.66 0.22 -0.06 0.95 0.19 -0.62 -0.24 -0.43 -0.05 -1.46 -0.17 -1.91 -1.49 -1.75 0.18 0.93 0.43 0.32 -0.15
- 2.47 - - 0.31 - 1.99 -1.97 -1.26 - - 2.94 - - - - - - -0.17 -
-0.56 -0.46 -0.4 -0.01 -0.54 0.95 -1.02 0.21 -0.58 -0.77 -0.48 0.03 0.58 0.44 -0.53 0.34 -0.03 1.1 -0.41 -0.14
0.05 2.05 0.25 -0.15 0.79 -0.1 -1.92 0.03 -0.38 -0.87 -2.21 -2.46 -1.2 -1.18 -1.19 -0.62 -3.1 1.37 -0.58 0.8
0.22 0.17 0.24 -0.06 0.62 0.42 -0.62 0.18 -0.6 -0.65 -0.04 -0.44 -0.07 -0.22 -0.11 -0.72 -0.36 0.68 0.2 0.06
0.92 -0.64 0.66 0.48 1.7 1.0 -0.47 -0.51 -2.18 -2.24 -1.61 -1.32 -3.25 -2.27 -3.01 -0.5 -0.66 1.75 -0.68 -0.15
0.87 0.08 0.77 0.77 0.91 1.3 -0.54 -0.67 -2.42 -2.46 -3.94 -1.52 -3.43 -2.6 -3.74 -0.53 -1.46 1.7 0.15 0.61
-1.1 - - - - - 3.28 - - - - - - - - - - - -1.63 3.24
- - - - - - 3.5 - - - - - - - - - - - - 3.12
- 1.44 - - - - 3.04 0.64 -0.07 -0.17 -3.68 -0.91 -2.35 -1.71 -4.43 1.57 0.61 - - -
- 2.92 -1.57 - - - 1.99 -1.7 2.26 -2.38 - - -0.93 -0.02 - - - - -1.12 -0.27
0.02 0.09 0.17 0.1 0.1 -1.29 1.06 -0.55 -0.53 -0.61 -0.21 -0.61 -0.89 -0.56 -0.02 -0.47 -0.59 0.71 0.98 0.49
0.46 - 0.24 3.16 - 1.99 - -0.18 -2.57 - - -0.42 - - - -2.44 1.35 - - -
- - - - - - - - - - - - - - - - - - - -
-1.3 -0.55 -1.0 0.45 1.09 -0.27 -4.83 0.36 -1.57 -1.12 -4.83 -0.71 -6.18 -3.27 -4.66 0.06 1.26 2.68 -0.23 -1.08
-4.58 -1.63 - -0.73 1.84 1.01 -2.85 0.1 -1.8 -1.01 -1.12 0.02 0.04 -0.67 -0.23 - -1.2 1.6 0.91 1.08
0.48 0.75 0.68 0.02 0.32 -0.56 0.37 0.05 -0.79 -0.66 0.2 -0.71 -1.46 -1.91 0.33 -1.63 -0.81 -0.13 0.8 0.74
0.16 0.41 0.67 -0.39 0.46 -0.53 0.36 -0.11 -0.5 -0.55 0.04 -0.53 -0.19 -0.53 0.17 -1.34 -0.59 -0.02 0.5 0.74
0.58 1.95 1.43 0.79 1.27 -1.65 0.92 -1.32 -2.91 -2.75 -2.94 -1.23 -2.69 - -3.0 -2.63 -1.08 0.56 -1.43 0.69
- - - -0.73 1.4 - 2.23 -0.52 -5.98 1.13 -1.04 -5.5 1.72 2.3 -1.17 - - -12.16 - -
-1.52 0.62 -2.13 -0.92 -0.96 1.39 -0.54 -1.0 -1.75 -1.92 -1.73 -2.7 0.13 0.12 -1.97 -2.31 -1.91 -2.45 1.09 2.76
-3.42 - -2.42 -0.71 -2.26 0.82 3.11 -2.01 -2.01 - -0.47 -1.74 -1.03 -2.22 0.78 - -2.3 -1.52 0.91 1.08
-2.45 -0.84 -1.96 -3.11 -1.97 -0.22 3.49 -2.05 -2.59 -2.64 -1.31 -2.22 -2.93 -2.57 -1.09 - - -1.13 1.47 0.46
0.22 0.51 0.53 0.41 0.64 0.7 0.66 -0.12 -1.23 -1.27 -0.19 -2.25 -1.81 -1.75 -0.84 - -2.62 1.84 -0.18 0.32
0.63 - -2.93 1.97 0.46 0.29 2.13 -1.54 - - - - -2.9 -3.14 -3.45 -2.97 -3.15 1.3 1.59 0.03
0.78 -0.74 0.79 0.71 1.43 1.24 -0.29 -0.21 -2.58 -1.91 -1.63 -0.61 -1.63 -2.13 -2.1 -1.48 -1.54 0.69 1.24 -0.48
-0.32 -0.13 -0.33 -0.45 0.5 1.02 0.5 -0.46 -1.41 -0.82 0.12 -0.32 -1.34 -1.44 0.33 -1.4 -2.04 0.93 1.38 0.25
- - - - - - - - - - - - - - - - - - - -
-5.93 -4.66 - -3.85 -4.59 -3.39 -3.19 0.65 -2.05 -3.0 -1.2 -3.21 -2.72 -3.02 -0.38 -1.78 -4.81 3.51 1.82 -0.2
0.07 -17.42 -2.27 - 2.11 - 0.88 0.82 0.7 1.58 - 0.2 - - -0.65 1.1 - - - 1.18
0.14 -1.33 0.04 1.32 1.0 -1.82 -5.19 -0.23 -3.13 -2.89 -2.32 -0.81 -2.12 -1.87 -2.18 -1.35 -0.87 2.14 1.78 0.35
-2.02 0.12 0.32 1.32 0.02 -1.21 -5.0 -1.37 -7.33 -7.86 -8.73 -7.03 - -7.73 -7.23 - -5.11 2.03 2.04 2.27
- - - - - - 4.13 -4.49 - - - - - - - - - - -0.89 0.96
- - - - - - - - - - - - - - - - - - - -
0.48 -0.42 -0.33 0.12 1.49 -1.81 0.12 -0.42 -1.18 -0.73 0.47 -0.41 -1.8 -1.66 0.26 -0.2 -1.12 0.77 0.5 0.69
-0.83 2.23 0.99 2.28 -2.28 1.98 - -1.18 -2.67 -2.36 -4.05 0.41 -4.5 -4.1 -4.06 -5.25 -3.7 -0.22 - -1.09
1.29 -1.27 -1.89 0.95 0.69 -1.03 0.26 -0.83 -0.69 -0.8 0.47 -0.44 -2.6 -2.3 0.74 0.07 -1.0 0.83 0.38 0.15
- - - 1.14 - - 3.78 - - - - - - - - - - - -1.05 1.85
-4.36 -5.91 - -4.15 -2.03 3.89 1.26 -4.38 -5.04 -4.31 -3.44 -2.55 -6.84 -6.75 -2.67 -5.98 -6.94 -1.27 -1.63 0.11
- - - - - - - - - - - - - - - - - - 4.32 -
-2.61 - - 3.03 - -8.94 1.38 1.13 0.45 0.38 - - 1.37 -18.73 -0.49 -1.6 -1.18 - -2.54 -
-3.08 - - - -1.03 -1.54 2.85 2.26 -27.72 0.39 1.49 -0.33 -0.83 -13.4 0.23 - -4.21 -1.56 -6.18 -
-0.0 0.67 0.99 -0.8 -0.39 -0.64 0.27 -0.63 -1.51 -1.5 -0.02 -0.76 0.19 -0.16 0.11 -0.36 -0.75 0.15 1.31 0.29
1.08 1.71 1.12 0.95 0.97 -1.62 -0.59 -1.17 -0.98 -0.82 0.47 -1.41 -1.75 -1.55 0.38 -1.42 -1.56 -0.76 -0.46 -1.7
-0.33 -0.91 -0.37 0.19 0.49 -0.99 -1.21 0.23 -0.22 0.1 0.27 0.48 -1.3 -0.81 0.43 -0.32 0.13 1.37 0.27 -0.49

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.