Heatmap: Cluster_37 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule
Ovule, mature
Ovule, pollinated
Strobilus, female
Ovulate strobilus
Microstrobilus
Kernel
Leaf
Leaf, female
Leaf, male
Leaf, salicylic acid
Leaf, seedling
Leaf, truncation control
Leaf, truncation treatment
Leaf, water
Yellow-green stripe leaves
Green leaves
Stem
Cambium
Root
-3.22 -4.48 -3.38 -4.27 -3.49 2.19 3.86 -6.23 -6.68 -5.2 -8.5 -8.65 -7.47 -9.91 -8.63 -6.25 -7.29 -4.66 -2.14 -2.44
-0.69 -4.77 -3.85 -3.32 -5.54 -3.98 4.18 -3.11 -6.82 -6.17 -5.4 -5.98 -6.41 -6.54 -5.79 -5.77 -5.85 -2.66 -2.1 -1.42
-0.25 -0.64 -0.88 -0.59 -0.29 0.18 1.86 -0.19 -0.19 -0.28 0.27 -0.99 -0.08 -0.3 0.44 -0.29 -0.72 -0.22 -0.11 0.15
0.48 -0.26 -0.08 -0.22 0.43 -1.37 1.87 -0.56 -0.7 -0.6 -0.43 -1.42 -1.5 -1.87 -0.52 -0.69 -0.41 0.74 0.1 1.05
-3.79 -4.01 -5.4 -3.67 -6.59 -1.19 3.06 0.06 -0.34 -0.55 1.48 -0.3 0.2 -0.52 1.37 -4.81 -2.81 -7.23 -5.47 -2.13
-0.95 1.12 0.23 -1.76 0.9 -0.74 3.28 -1.97 -2.17 -2.14 -3.52 -1.72 -6.0 -5.4 -4.96 -2.47 -1.49 -1.12 0.35 -2.37
-0.38 0.59 -0.07 -0.27 0.32 -0.27 1.59 0.23 -0.29 -0.31 0.58 -0.67 -0.19 -0.2 0.74 -0.95 -1.89 -1.04 -0.03 -2.04
-0.28 0.81 -0.07 0.37 -0.03 -0.37 1.06 -0.3 -0.61 -0.78 -0.05 -1.53 -0.56 -0.77 -0.0 -0.34 -0.51 0.29 0.76 0.38
-4.89 - - -3.55 -3.37 -1.61 3.28 -0.97 -1.56 -0.9 -0.88 -0.02 -0.35 -0.25 -1.17 1.57 0.35 -6.42 -3.16 -1.38
-1.94 -3.31 -2.57 -3.77 - 2.19 3.89 -8.97 - -9.29 - - - - - - - -6.0 -5.62 -6.76
-2.64 -3.86 -2.5 -2.13 -2.24 -5.53 4.19 -4.87 -6.41 -5.65 -4.9 -6.71 -4.97 -5.59 -6.44 -5.55 -5.0 -2.84 -3.16 -1.26
0.6 - -0.11 - - -0.38 2.98 -1.19 -0.35 0.27 -2.3 -0.97 -1.61 -1.71 -0.09 1.14 -1.15 - -1.17 0.07
- -5.84 - -6.3 - -6.73 4.32 -10.04 - - - - - - - - - - - -6.14
-0.25 -0.14 -0.36 -0.37 0.58 0.16 2.14 -0.2 -0.87 -0.84 -0.72 -0.75 -1.11 -1.21 -0.64 -0.81 -0.71 0.24 0.48 0.27
-0.16 -0.37 -0.26 -0.94 0.6 0.07 2.11 -0.33 -0.74 -0.61 -0.67 -0.38 -0.36 -0.39 -0.65 -0.52 -0.26 0.08 -0.57 0.28
-0.91 0.36 -0.47 -0.86 -0.15 -0.05 1.99 0.24 -0.29 -0.46 -0.29 -0.13 0.17 -0.15 -0.25 -1.04 -0.86 -0.19 -0.94 0.39
-0.35 0.64 -1.42 -0.34 -0.12 0.85 2.65 -0.81 -0.32 -0.74 -0.92 -1.53 -0.44 -0.84 -0.64 -0.41 -1.5 -1.71 -0.66 -0.56
- - - -1.01 -0.3 -1.52 3.62 -1.74 -1.09 -1.92 - -2.33 -1.61 -1.57 -0.88 - -1.22 0.14 1.06 -
- -0.88 - - -1.92 1.15 3.6 -1.67 -3.77 -3.78 - -2.15 - -2.48 -3.23 -2.75 -1.55 0.05 0.67 -0.43
-2.28 - -3.75 - -2.68 -0.01 3.96 -2.0 -2.52 -4.71 -2.94 -2.84 -5.29 -3.71 -1.79 -1.2 -1.3 -1.07 -1.22 -3.16
-6.88 - - - - - 3.7 -3.3 -4.09 -3.52 -3.99 -4.49 -3.46 -3.83 -4.44 - -5.42 - -4.44 2.68
-5.64 - - - - - 4.1 -9.84 - - - - - - - - - - -4.12 1.49
0.12 -0.1 0.31 -0.92 -0.62 0.55 2.88 -0.98 -1.37 -1.02 -0.18 -1.1 -0.4 -0.54 -0.6 -2.49 -3.39 -2.13 -8.05 0.46
0.83 1.44 0.71 1.11 0.92 -0.76 1.76 -1.78 -2.24 -2.41 -1.19 -1.79 -2.43 -2.05 -1.25 -1.86 -2.15 -0.24 0.75 -0.89
1.23 1.87 1.32 0.74 0.05 -1.29 1.45 -1.5 -2.7 -3.14 -3.21 -2.03 -3.03 -1.83 -2.54 0.87 -0.54 -1.29 -0.07 -2.06
1.44 1.12 1.4 0.56 0.44 -1.7 1.66 -1.56 -2.09 -2.58 -2.47 -2.28 -3.01 -1.23 -2.14 1.15 -0.12 -1.67 -0.96 -1.63
-0.46 0.78 0.4 0.74 1.27 0.35 2.29 -1.01 -2.55 -2.03 -0.87 -1.59 -2.92 -2.86 -0.79 -2.31 -1.56 0.27 -0.79 0.03
-2.91 -1.65 -1.29 -3.3 -2.17 -3.08 4.2 -5.56 -5.65 -4.65 -4.16 -7.58 -4.06 -3.62 -4.61 - - -7.28 - -
-2.19 -2.68 -1.68 -1.98 -1.52 -2.36 4.14 -4.5 -4.96 -3.26 -2.9 -6.58 -2.38 -2.54 -2.97 -8.98 - -6.65 -10.82 -7.15
0.46 0.67 0.46 -0.26 -0.32 -2.21 2.02 -0.37 -0.51 -0.37 -0.1 -0.71 0.36 -0.1 -0.24 -0.47 -0.92 -1.17 -0.32 -1.32
0.74 0.68 0.22 0.17 0.62 1.21 1.5 -1.31 -3.39 -2.89 -3.33 -2.68 -5.98 -4.33 -2.55 -1.39 -1.46 1.33 -0.37 1.38
-1.5 0.39 -1.41 - 1.32 0.71 2.14 -0.58 -0.6 -1.31 -0.15 -0.52 -0.27 -0.52 0.44 -0.59 0.22 -3.14 0.19 -3.19
-1.04 -0.35 -0.44 -0.89 -0.82 0.23 2.88 -0.99 -0.46 -0.63 -0.98 -1.39 -0.57 -0.59 -1.13 -0.74 -1.16 -0.5 0.49 -0.71
-0.83 - -1.04 - - - 4.01 -2.3 -3.76 - -1.29 -4.14 - -3.58 - -1.49 -2.07 -0.69 -0.59 -2.48
- - -7.25 - - -6.22 4.31 -7.17 -7.6 -15.66 -7.52 -7.44 -6.7 - - - - - -7.27 -4.7
0.6 0.62 0.33 0.3 0.4 0.75 0.46 -0.3 -0.79 -0.89 -0.91 -1.26 -0.73 -0.88 -0.93 -0.33 -0.55 0.6 0.19 0.5
0.01 0.42 -0.24 -0.18 0.13 -0.21 1.34 -0.14 -0.44 -0.5 -0.07 -0.56 -0.06 -0.56 0.04 -0.32 -0.55 -0.0 0.51 -0.17
-0.29 -0.1 -0.54 0.33 0.76 -1.37 1.68 -0.21 -0.51 -0.25 0.11 -0.76 -0.17 -0.49 0.03 -0.98 -0.5 -0.04 0.66 -0.84
-9.4 - - -5.73 - -0.52 4.2 -5.88 - -9.29 - - - - - -7.15 - -0.65 -2.32 -5.11
0.6 0.93 0.85 0.54 0.3 -0.75 0.55 -0.29 -0.63 -0.51 0.42 -1.31 -0.76 -1.07 0.3 -0.39 -0.78 -0.01 -0.17 -0.75
1.26 1.48 1.27 0.71 0.38 -1.03 2.13 -1.78 -1.97 -2.28 -1.0 -3.08 -1.63 -2.01 -1.0 -1.91 -2.96 -0.17 -0.93 -1.57
0.67 0.56 0.35 0.51 0.4 0.15 0.67 -0.21 -0.57 -0.72 -0.14 -0.76 -0.88 -0.54 -0.37 -0.39 -0.44 0.09 0.06 -0.07
0.04 - 1.01 - 0.43 - 2.89 -1.38 -0.25 -1.39 2.37 - -1.97 - 0.24 - - - - -
0.91 0.73 1.17 0.24 0.32 0.27 1.62 -0.15 -1.51 -2.91 -1.97 -4.94 0.25 -0.78 -1.49 0.03 -0.73 -1.9 -2.2 0.67
1.08 1.52 0.85 0.99 0.67 1.84 0.41 -2.16 -5.87 -5.01 -3.19 -4.3 -4.55 -5.25 -2.68 -4.59 -4.14 -0.64 1.03 0.37
1.8 1.46 0.95 1.2 1.72 -1.75 0.53 -1.55 -1.42 -2.11 -0.9 -1.73 -2.17 -2.91 -1.57 -1.87 -2.18 -1.53 -1.11 -0.48
1.61 -0.09 1.3 1.59 0.41 -1.16 1.68 -0.95 -1.31 -1.53 -1.36 -0.87 -1.73 -1.42 -1.96 -1.72 -1.58 -0.51 -0.63 -1.26
-3.41 -1.28 -0.18 - -0.38 - 2.7 -1.09 0.0 0.41 0.9 -1.46 -0.9 -1.57 1.24 -0.74 -0.48 -2.49 -0.27 -0.33
-1.58 -3.19 -1.7 -0.7 -1.88 -2.48 4.16 -3.56 -4.89 - - -6.16 -5.74 -3.52 - - - -4.54 - -
-1.76 - -1.76 - -1.6 -0.56 3.82 -1.97 -0.18 -1.57 -0.22 -1.72 -2.01 -3.26 -1.84 - - - -0.31 -2.06
0.63 0.73 0.17 -0.77 0.04 0.26 1.88 -0.48 -0.92 -0.69 -0.45 0.06 -1.15 -1.77 -0.55 -0.84 -1.57 0.2 0.54 -0.73
0.88 1.32 0.85 0.22 -0.02 -1.51 1.67 -1.69 -0.92 -0.78 0.25 -1.83 -2.47 -3.56 -0.14 -0.52 -1.24 -1.54 0.49 0.34
1.03 1.73 1.33 0.81 0.74 0.15 1.49 -2.18 -2.22 -2.05 -1.76 -2.22 -2.79 -3.04 -1.86 -3.28 -2.55 -1.29 0.5 -0.04
-0.96 0.13 0.37 1.42 -0.67 0.53 2.46 -1.35 -0.01 -0.65 -3.28 -2.59 - -4.39 -1.43 - - 1.61 -0.49 -1.42
-1.46 -0.29 -0.23 -0.6 1.15 0.54 1.75 -0.57 -1.08 -1.08 -0.85 -0.08 -2.17 -1.87 -0.75 -0.33 0.01 0.4 0.41 0.69
1.01 0.59 0.72 0.87 0.29 -1.33 1.61 -0.89 -1.15 -1.13 -1.05 -1.35 -0.96 -0.77 -1.27 -0.11 -0.53 0.36 -0.08 -0.61
1.46 0.99 0.37 0.84 0.07 -1.44 2.07 -1.14 -1.32 -1.32 -1.62 -1.61 -1.96 -1.87 -1.36 -1.41 -1.59 -0.17 -0.0 0.18
-0.87 -2.51 -0.35 -0.97 -0.39 -1.08 2.83 -0.64 -1.35 -1.28 0.04 -0.43 -1.27 -1.04 0.0 -1.74 -1.28 -1.32 0.13 1.21
- - - - - -5.24 4.32 - - - - - - - - - - - - -
0.65 0.02 0.63 0.37 -0.07 0.51 2.09 0.0 -1.33 -1.98 -0.73 -4.83 -0.36 -1.41 -0.87 0.26 -0.61 -2.28 -2.59 0.78
-2.59 -2.51 -3.08 -3.67 -2.64 2.16 3.53 -2.17 -2.28 -2.2 -2.34 -2.21 -2.25 -2.58 -2.79 -3.72 -3.65 -1.36 -0.42 -1.22
-0.01 0.89 0.12 0.31 0.03 0.66 1.61 -0.56 -0.46 -0.77 -0.64 -0.9 -0.55 -0.94 -0.4 -0.5 -0.88 -0.31 0.2 -0.25
-0.76 -0.02 -0.45 -1.9 -0.13 -0.29 2.65 -2.2 -1.62 -1.48 0.73 -1.92 -2.72 -2.12 0.73 -0.85 -1.2 -0.21 0.06 0.74
0.79 0.38 0.17 0.32 0.28 0.6 1.57 -0.61 -1.22 -1.54 -0.4 -1.15 -1.15 -1.2 -0.57 -0.46 -1.03 -0.03 0.35 0.31
0.43 -0.52 -2.69 0.02 -1.56 -0.13 3.13 -0.87 -0.76 -1.86 - -0.59 -2.85 -3.08 -1.27 -2.39 -2.19 0.35 0.78 -0.64
0.23 -0.48 -1.42 0.31 1.06 0.15 2.44 -1.42 -7.38 -6.27 -6.77 -4.16 -7.13 -6.47 -6.38 -5.02 -5.2 1.6 -1.82 2.01
2.18 1.12 1.26 1.67 1.14 -0.27 1.99 -4.1 - - - -5.23 -6.18 -6.24 -4.93 - -3.15 -3.43 -1.83 -3.47
0.55 - -3.71 0.12 1.15 - 3.85 -4.16 - - -5.43 -4.17 - - - - - -3.25 -4.11 -1.31
-4.56 -3.41 -3.7 -5.5 -6.26 -5.71 4.12 -2.84 -2.53 -1.82 -1.6 -3.63 -1.2 -1.99 -2.01 -2.99 -3.95 -6.23 - -2.55
-1.28 -2.08 0.09 -4.88 -5.31 -5.47 3.72 -9.29 - - - -9.51 - - - - -8.21 -3.86 -4.14 2.3
-0.54 -0.09 -0.15 -0.29 -0.0 -1.83 2.3 -0.73 -0.78 -0.88 -0.58 -1.33 -0.83 -0.66 -0.78 -0.41 -0.44 -0.59 -0.01 1.44
-0.13 1.42 0.2 0.86 -0.26 -0.7 2.79 -0.72 -2.91 -2.09 -1.85 -1.54 -1.78 -0.61 -1.49 - -0.92 - -1.0 0.23
- - - - - - 3.63 -1.73 - -0.4 - - - - - - - 2.71 - -
-0.38 - -1.83 -0.19 1.36 - 3.53 -2.3 - - - - - - - - -2.79 -0.36 0.07 0.84
0.18 -0.86 - -0.32 -1.5 -2.41 3.61 -2.32 -5.18 - - -3.86 - -5.0 - - -3.49 0.19 -0.04 1.18
0.21 -0.76 -2.29 0.37 0.26 -2.65 3.38 -2.33 - - - -5.7 - - -4.11 - - 0.4 1.02 0.48
1.43 0.74 0.82 0.67 0.31 -1.6 1.96 -1.38 -1.65 -1.78 -1.37 -2.65 -2.27 -2.44 -1.39 -1.68 -2.09 0.02 0.94 0.04
-2.17 -2.46 -2.39 -1.73 -1.44 0.42 2.9 0.21 -1.07 -0.61 -0.81 -0.75 -1.01 -1.17 -1.18 -1.99 -0.73 -1.3 -0.13 1.56
- - - - - -1.28 4.28 -9.4 - - - - - - - - - -4.34 -3.43 -
-0.04 0.24 -0.16 -0.98 -0.76 1.01 2.69 -2.29 -0.78 -1.11 -3.63 -1.97 -1.98 0.43 -3.93 -2.11 -3.11 0.95 -0.41 0.12
-0.2 0.4 -0.39 -0.52 -0.46 0.78 1.7 -0.5 -0.18 -0.48 -0.02 -1.02 0.21 0.08 0.01 0.2 -0.88 -0.48 -0.76 -0.63
-5.73 -3.6 - - -0.98 0.85 3.2 -4.81 -3.37 -3.05 - -2.36 -1.42 -2.42 -1.53 -4.37 -0.84 -0.23 -2.8 2.45
-0.5 -0.59 -0.25 -1.64 -2.59 -3.14 4.05 -3.08 -4.91 -4.08 - -3.65 - - - - -2.02 - -3.8 -
-2.59 -2.91 -3.12 -0.63 -0.78 -0.81 2.92 -1.26 -3.77 -2.94 -2.33 -1.15 -4.81 -3.44 -0.8 -1.2 -0.5 1.46 1.36 0.81
-3.53 - 0.07 -2.39 -4.07 -3.03 4.07 -2.89 -3.51 -3.48 -1.97 -5.97 -3.56 -4.16 -2.18 -2.02 -2.78 -3.63 -2.61 -3.92
- - - - - - 4.32 - - - - - - - - - - - - -
- - -3.33 - - 0.63 4.17 -3.48 - -4.29 - -2.35 - - - - - - -5.1 -
0.13 -0.04 -0.33 0.27 0.59 0.61 1.44 -0.2 -0.62 -0.6 -0.14 -0.83 -0.52 -0.53 -0.25 -0.7 -1.02 0.16 0.6 -0.86
- - - - - - 4.32 - - - - - - - - - - - - -
-1.07 -0.17 -1.01 -0.39 -2.7 -3.52 3.86 -1.32 -2.71 -3.21 -2.86 -3.1 -2.69 -2.29 -3.02 -1.42 -2.13 -0.99 -5.13 -3.56
0.99 1.59 1.68 1.3 1.05 -9.45 2.69 -2.03 -14.88 -13.39 -14.2 -11.63 - -11.9 -13.36 -10.13 -9.61 -0.84 -13.64 -7.12
-2.72 - - - - -2.63 4.23 -5.28 - - - -4.78 -12.78 -11.4 -2.06 - - - -0.65 -
-1.93 -1.82 -1.29 -0.04 -0.4 -2.3 3.65 -2.25 -3.66 -3.79 - -1.38 -3.79 -4.47 -3.19 - -4.45 -0.79 -2.02 1.44
0.65 0.64 -1.14 0.39 0.48 -0.7 2.53 -0.32 -2.62 -2.52 -0.44 -2.35 -1.19 -1.24 -1.08 -5.45 -1.9 1.55 -4.01 -0.63
-0.63 -0.03 -0.87 -0.7 -0.06 -0.07 2.16 -0.57 -0.73 -0.87 -0.15 -0.8 -0.26 -0.57 -0.02 -0.57 -0.78 0.09 0.77 0.03
1.58 -0.41 1.06 0.77 0.91 -0.23 2.05 -1.92 -2.75 -2.77 -2.17 -3.09 -4.45 -4.36 -2.08 -1.28 -1.02 -0.45 0.6 0.29
0.28 0.58 0.53 -0.34 0.1 0.35 1.3 -0.12 0.02 -0.38 -0.49 -1.05 -0.09 -0.26 -0.79 -0.76 -1.27 0.09 0.43 -0.74
0.18 0.53 0.77 0.34 0.09 -0.16 1.08 -0.91 -0.45 -0.48 0.7 -1.31 -1.17 -1.35 0.43 -0.29 0.17 -1.0 -0.57 0.09
-1.82 0.38 -1.52 -1.76 -1.43 -3.52 2.56 -0.51 0.77 0.91 -0.05 -0.46 0.85 0.16 -0.04 -0.69 -1.38 -1.03 -3.67 -
- - - - - - 4.32 - - - - - - - - - - - - -
-3.5 -3.21 -2.87 -7.3 -3.39 -6.95 3.91 -9.7 - -8.68 - -9.17 -9.76 - - - - -6.29 -6.56 2.18
- - -2.56 - 1.72 -0.04 3.55 -6.9 - - - - - - - - - - - 1.94
- - - - - - 4.24 - -1.25 -0.47 - - - - - - - - - -
-1.01 -0.75 -1.06 - -1.78 -0.16 2.43 0.04 0.24 0.12 0.7 -0.48 -0.57 -0.95 0.23 -1.48 0.06 -0.04 -0.52 -0.34
0.39 0.56 0.14 0.13 0.56 -0.77 -0.22 -0.09 -0.34 -0.22 0.14 -0.44 0.13 -0.4 0.31 -0.38 -0.35 -0.12 0.3 -0.19
- - - - - - 3.78 -0.22 - - - 1.18 1.63 - - - - - - -
- - - - - - 4.32 - - - - - - - - - - - - -
-2.12 -4.3 -3.12 -1.65 -2.22 0.57 4.01 -2.7 -5.05 -4.64 -2.65 -3.74 -3.31 -3.48 -2.32 -2.68 -3.62 -2.82 -2.49 -3.32
0.71 0.05 0.7 0.71 0.72 -0.98 2.17 -1.14 -1.42 -1.06 -0.11 -3.31 -2.32 -1.83 -0.42 -0.04 -3.38 -0.33 -0.44 0.33
-1.17 -1.67 -3.78 -2.62 -1.34 -0.42 3.32 -1.23 -2.58 -2.17 0.87 -0.78 -1.32 -0.77 0.41 -3.19 -3.66 -3.76 -4.27 1.0
0.33 1.33 -0.3 0.32 0.36 0.8 1.72 -0.74 -2.09 -2.03 -1.16 -0.74 -1.79 -2.14 -1.28 -2.21 -1.06 -0.15 0.97 0.34
0.43 0.94 -0.22 0.48 0.28 0.87 2.01 -0.64 -1.7 -1.48 -0.85 -0.7 -0.98 -0.97 -0.83 -1.87 -1.67 -0.55 0.06 0.05
-1.44 -1.95 -1.51 -3.52 -4.07 0.9 4.08 -8.94 - - - - - - - - - -5.11 -6.36 -4.82
1.66 1.25 1.75 0.36 1.02 -2.66 2.65 -3.1 -6.1 - -4.95 -6.83 - - -5.62 - -4.1 -0.78 -2.47 -1.5
1.37 1.79 1.89 0.56 0.79 -2.22 2.46 -3.2 -6.55 -6.34 -6.6 -7.45 -7.39 -6.99 -6.43 -5.19 -7.36 -1.03 -1.85 -1.41
0.29 -0.85 -2.29 -2.03 -0.24 0.32 3.4 -4.3 -8.27 -7.02 - -3.44 -8.45 -6.85 -8.42 - -5.51 -4.04 -3.14 2.26
-0.2 -0.09 -0.37 -0.2 0.44 -0.12 1.23 -0.28 -0.82 -0.83 -0.21 -0.7 -0.86 -1.0 -0.08 -0.52 -0.52 1.12 0.57 0.53
0.63 -0.13 -0.37 0.41 -0.37 -2.16 2.15 -0.27 -0.33 -0.57 0.03 -0.58 -0.05 -0.62 0.23 -0.11 -0.91 -0.87 -0.35 -1.13
0.0 -0.69 -0.48 -0.71 -0.1 1.73 2.6 -0.93 -2.16 -2.13 -1.33 -2.09 -2.06 -1.91 -1.08 -1.57 -0.86 -0.53 0.93 -0.57
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Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.