Heatmap: Cluster_59 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule
Ovule, mature
Ovule, pollinated
Strobilus, female
Ovulate strobilus
Microstrobilus
Kernel
Leaf
Leaf, female
Leaf, male
Leaf, salicylic acid
Leaf, seedling
Leaf, truncation control
Leaf, truncation treatment
Leaf, water
Yellow-green stripe leaves
Green leaves
Stem
Cambium
Root
4.32 - - - - - - - - - - - - - - - - - - -
4.32 - - - - - - - - - - - - - - - - - - -
1.84 -1.44 -0.97 1.1 0.31 -0.4 0.26 -0.38 -1.95 -1.1 -0.2 -5.38 0.09 0.04 -1.0 0.05 -1.76 0.38 1.0 -0.78
- - - - - - - 1.41 2.3 2.97 - - - 0.81 - 1.49 - - - -
1.74 - - - - - 1.47 1.17 - - - - 2.17 -0.37 - - 2.24 - 0.69 -
2.12 - 0.68 - - - 1.04 1.21 1.31 1.27 -13.42 - 0.03 - - 0.63 0.84 - -1.15 -
3.23 - - - - - - 0.05 - - - - 1.64 1.41 - - - - 1.93 -
1.81 -1.28 - 1.59 0.45 -0.52 0.15 -0.05 -0.18 -0.45 -0.9 -4.41 0.23 -0.73 -1.59 0.26 -1.33 -0.62 1.06 -1.72
-0.91 - -0.97 1.74 - - -1.58 0.36 -1.14 -1.78 -0.07 -1.23 0.15 -0.13 2.05 -0.68 0.15 1.43 0.35 -
1.51 - - 2.27 0.44 -0.97 -2.86 0.2 -0.72 -1.05 -0.27 -4.22 0.48 0.42 -0.85 -0.74 -2.13 -1.29 1.43 -
1.97 - - 1.39 0.3 - -0.35 -0.15 -0.23 -1.13 - -2.29 -0.97 -0.42 0.46 1.47 -0.21 -1.48 1.27 -
1.83 - - - 1.14 - 0.4 0.16 0.14 0.21 0.43 - -0.19 1.18 0.33 - -0.04 -0.72 -0.96 0.78
-0.34 - 0.67 0.7 0.58 - - 0.3 1.22 -0.24 -0.07 -1.98 -1.35 0.13 2.01 -0.72 0.1 - 0.29 -1.1
0.61 1.41 - - 1.61 - -1.61 0.76 -0.46 0.02 - -2.56 -1.14 -0.56 -0.98 2.47 - -0.8 0.1 -
3.24 - - - - - 2.42 0.94 - - - - - 1.72 - - - - - -
0.94 2.11 0.16 1.66 0.05 0.15 - 1.13 - -0.86 - - - - 1.39 - - -3.39 - 0.92
1.61 -2.3 -1.17 0.97 -0.63 -2.48 -4.66 0.52 0.16 0.92 0.09 -1.71 -0.45 0.76 -0.7 -2.62 -2.83 -1.62 1.86 -1.37
1.88 -1.06 -0.42 2.14 0.38 -1.03 0.99 -0.67 -2.4 -2.25 -3.49 -1.35 -2.25 -3.93 -2.38 -4.74 -3.06 -0.04 1.81 -1.76
- - - - - - - 4.32 - - - - - - - - - - - -
4.32 - - - - - - - - - - - - - - - - - - -
1.23 -0.77 0.16 0.36 0.14 -0.3 0.27 0.36 -0.7 -0.75 0.02 -0.9 0.01 0.43 0.22 0.15 -0.49 -0.47 -0.46 -0.49
1.21 -0.77 -2.94 0.77 -0.19 -3.74 -0.96 0.18 0.15 -0.35 0.71 -4.19 -0.01 -1.32 1.35 0.22 -0.42 -0.71 0.1 0.63
1.4 0.0 -0.36 1.47 0.27 -1.79 -0.05 -0.33 -0.18 -0.47 -0.37 -3.36 -0.53 -0.96 -0.59 0.2 -2.24 -0.43 1.32 -0.71
1.3 -1.06 -1.2 2.24 -0.72 -4.21 -0.68 -0.24 -0.44 -0.18 0.32 -2.86 -0.7 -0.68 0.55 -0.89 -1.34 -0.28 0.68 -0.55
2.0 0.79 - 1.6 -0.22 -1.35 -1.52 0.15 0.25 -0.91 0.27 -2.04 -1.66 -1.34 0.32 1.29 -0.28 - - -2.95
- - - - - - - 4.32 - - - - - - - - - - - -
1.23 -0.69 -4.18 1.85 0.09 -3.98 -1.59 -0.29 -0.06 -0.35 -0.23 -2.85 -0.59 -0.41 0.15 1.0 -0.34 -0.09 0.27 -0.14
1.55 -1.04 -0.58 1.5 -0.22 -0.95 -0.77 0.04 -0.29 -0.09 -0.69 -3.8 -1.27 -1.25 -0.07 0.5 -0.88 0.84 0.73 -1.16
1.44 - - - - - - 1.52 - 0.85 - - -0.7 - - - - - -0.98 3.52
1.51 -1.84 -0.84 1.02 -0.44 -2.17 -0.86 0.25 -0.14 -0.17 0.18 -3.91 0.34 -0.12 0.78 -0.72 -1.25 -0.36 0.62 0.42
- - - - - - - 4.32 - - - - - - - - - - - -
-1.57 - - - - - -2.21 1.52 0.82 -1.37 0.67 -2.38 1.63 1.11 0.62 -1.3 -0.09 -0.77 1.76 -0.88
1.17 3.29 - - - - -0.57 0.91 -0.76 - - - 0.79 0.21 0.05 - - - - -0.16
1.21 1.11 - 1.07 0.11 - 0.45 0.06 0.84 -0.13 0.33 - -3.03 -3.14 0.87 -0.94 -1.14 - 1.03 -0.14
- - - - - - - 4.06 - - - - - - - - - - 1.71 -
- - - - - - - 1.31 - - - - - - - - - - 4.13 -
3.83 - - - - - - - 1.51 - - - - - - - - - 1.56 -
- - - - - - - 4.32 - - - - - - - - - - - -
1.24 - -1.59 2.43 -1.18 - - -0.94 0.13 -3.4 -2.24 - -2.47 0.62 0.25 2.29 - - 0.03 -0.48
- - -0.91 - - 0.28 -1.91 1.32 1.98 0.14 -0.13 -1.85 -0.23 0.81 1.94 1.1 -0.95 - -2.56 -
- - 4.05 - - - - 1.77 - - - - - - - - - - - -
2.08 - - 2.15 -0.56 - - -1.23 -0.2 -1.37 -0.6 - -1.9 -0.99 - 1.72 0.56 -0.72 -1.97 0.94
0.74 0.83 - - - - -0.06 1.48 -0.41 -0.14 -0.35 -0.71 - -1.72 1.8 1.18 1.89 - - -
2.06 - -1.24 1.32 -2.43 0.64 - -1.12 -1.19 -2.64 -2.21 -3.44 1.02 -0.61 0.75 -1.08 0.74 0.57 -2.27 0.69
2.39 - - - - - - 0.37 - - 2.71 - 2.15 - - - - - 1.32 -
- - - - - - - 2.64 - - - - - 3.79 - - - - - -
3.43 - - - - - - 0.87 - - - - - 2.89 - - - - - -
- - - - - - 0.31 0.12 -1.5 -0.77 1.55 - - -1.35 1.92 2.74 - - 1.56 -
0.09 1.23 0.07 - 0.07 1.27 -0.54 0.42 0.68 0.26 0.03 -0.24 0.28 - 0.88 - - 0.97 -1.41 -
- - - 3.99 - - - -0.31 0.6 - - - - - - - - - 0.81 -
1.48 - - - - - 1.59 0.44 1.76 1.64 - - 0.28 - 1.22 - - - 1.49 -
3.4 - - - 1.15 - - 0.59 0.46 - - - -0.28 - 0.97 - - - 0.61 -
3.07 - - 1.48 - - -0.85 -0.3 -0.95 -1.04 - -0.61 -0.62 -1.73 - - 1.09 0.61 0.28 -
1.63 -0.2 -0.67 1.83 0.6 -2.07 0.0 -0.54 -0.49 -0.53 -0.11 -2.42 -1.44 -1.47 0.3 -1.37 -1.7 -0.59 1.16 -1.57
1.38 -0.57 - -0.03 -1.57 2.23 - -0.25 0.8 -2.58 - -1.56 -3.07 -0.15 1.26 - - 1.64 0.11 -
1.69 -0.6 -0.85 1.26 -0.02 -4.01 -1.49 0.02 0.06 -0.92 -1.81 -3.92 0.11 1.46 -4.58 -1.19 -4.24 -1.14 1.45 0.36
1.0 - - 2.08 - 1.72 1.96 -0.72 -1.31 - - - - -1.08 - 1.89 - - 0.46 -
4.32 - - - - - - - - - - - - - - - - - - -
1.03 1.28 -1.47 0.23 2.0 -1.13 -2.24 -0.09 - -0.52 0.48 -1.78 -0.57 -0.2 -1.7 - -0.01 -1.66 1.52 -
1.48 0.63 - - -0.08 0.77 - 0.9 -1.46 - -1.54 -1.63 - - -1.58 2.23 0.79 1.13 -0.57 -1.0
2.47 - - 1.32 -0.38 - 0.4 0.38 -0.47 - -0.41 -2.17 0.26 -1.78 - - - 1.02 1.75 -
- - - - - - - 4.32 - - - - - - - - - - - -
0.86 0.31 -1.26 -0.1 0.66 -1.05 0.35 0.3 0.35 0.09 0.48 -2.18 -0.81 -0.62 -0.06 -0.42 -1.06 -0.44 1.25 -0.87
- - - - - - - 1.57 - - - - - 4.09 - - - - - -
- - - 3.65 - - 2.19 -0.08 - - - - - 0.95 - - - - - -
- - - - - - - 4.32 - - - - - - - - - - - -
1.63 -0.64 - 0.91 1.11 - -0.27 0.5 -0.35 -0.59 - -3.58 1.7 0.36 -1.01 0.48 -1.69 - 0.51 -1.89
4.32 - - - - - - - - - - - - - - - - - - -
1.9 - - 1.57 - - -0.83 0.31 -0.34 - 0.77 -1.1 - - 2.03 - - 0.82 0.95 -0.39
4.29 - - - - - - -1.42 - - - - - - - - - - - -
- - 2.41 - - - - 1.55 - 0.6 - - 2.43 2.0 - - - - -0.2 -
1.43 - - 1.77 1.11 1.34 1.28 -2.02 - - 1.04 - -1.27 - -0.12 0.76 - - 0.52 -
-0.93 1.19 - 2.74 - - 0.87 0.1 - - - - -0.24 0.16 0.95 - - - 1.54 -0.26
0.71 - - - - 1.77 - 1.57 -0.01 - - - - - - - 1.82 - 1.05 2.43
1.55 -0.39 -1.72 0.57 0.6 -0.4 -0.3 0.22 0.09 0.21 0.27 -2.59 -1.36 -1.48 -0.03 -0.11 -2.44 -0.28 1.3 -0.84
1.92 - - - - 0.52 -0.06 0.64 -0.25 - - - 1.3 0.72 0.56 2.2 - - - 0.34
3.44 - -1.32 -19.53 2.06 -1.0 -1.63 -0.93 -4.33 -4.15 -2.47 -2.16 -2.54 -2.0 -0.98 -1.38 - -0.85 -0.6 -2.26
- - 1.79 - - - 2.02 -0.39 0.1 - - - - 0.29 - 2.5 1.91 - - -
-0.98 2.53 2.08 1.9 - - -0.69 -0.96 - - - - -1.33 - - - 2.05 - -3.98 -
0.48 -1.58 0.46 1.55 - - 0.52 -0.13 0.77 0.08 - 0.24 - -1.88 0.9 1.77 0.53 -1.34 -1.73 -
- - -2.16 -0.45 -2.16 - -2.78 1.1 1.39 2.09 0.58 -1.52 - 0.42 0.98 0.24 1.74 - - -
1.95 - - - - - - 0.77 - - - - 1.57 1.57 - - - - 3.09 -
2.01 -0.78 -1.94 1.35 0.15 -1.69 -2.59 0.31 -1.42 -1.34 -0.26 - -0.77 -1.94 0.75 -0.12 -0.43 -0.13 1.11 -0.15
2.05 -2.34 -1.82 1.51 -0.64 -1.3 -3.1 -0.27 -1.32 -1.49 0.24 -2.85 -0.19 -0.8 -0.86 0.54 0.47 -0.08 0.85 -0.2
2.22 - - 2.44 - - - 0.0 - - - - 2.41 1.84 - - - - - -
1.38 - - 2.18 - - 1.48 -0.36 - - 0.82 - - -1.04 1.2 2.1 - - -1.08 -
1.41 - - - - - - 0.4 - - 2.28 0.52 - - - 3.0 - - 0.81 -
2.73 - - 1.23 1.11 - -1.33 1.4 -1.04 1.08 - - - - - - 0.02 - 0.02 0.25
1.43 - - 4.09 - - - -1.58 - - - - - - - - - - - -
- - - - - - - 4.32 - - - - - - - - - - - -
1.69 -0.24 -3.41 1.24 -0.92 -3.65 -1.31 0.21 -0.02 0.46 -0.46 -3.44 -0.77 -0.61 -1.02 1.37 -0.46 -0.35 1.16 -3.63
1.64 0.5 -1.87 1.74 0.37 -2.98 -1.53 -0.18 0.25 0.53 -0.91 -2.77 -1.44 -1.52 -1.05 0.57 -1.74 -0.12 0.99 -5.55
1.47 -0.34 -1.32 1.12 0.93 -3.56 -0.61 0.03 -0.34 -0.6 -1.2 -2.75 0.38 0.76 -1.55 -0.55 -0.96 0.23 1.04 -1.3
2.47 - - - - - - 1.27 - -0.18 - -0.13 - 2.04 2.62 - - - - -
1.96 0.69 - - -0.25 - -0.32 0.33 0.47 0.75 - - 0.8 - - 1.04 - 0.37 1.52 -0.76
- - - - - - - 4.32 - - - - - - - - - - - -
1.29 - -2.28 1.43 -0.6 -1.08 -1.06 0.04 -0.49 -0.09 -1.32 -2.19 0.39 0.53 -2.36 1.88 -0.06 -2.32 0.2 -0.36
1.71 2.41 -0.04 1.21 -0.95 - -1.81 0.01 -1.72 -0.58 -2.12 -2.44 -0.07 0.45 -2.16 0.2 0.33 - - -
1.46 0.9 -0.81 1.18 -0.57 -1.54 -0.01 -0.48 -0.86 -0.66 -0.9 -1.98 -0.19 -2.51 -0.85 -1.69 -2.35 0.52 1.73 -0.01
- - - 4.06 - - 1.59 -1.63 - - - - - - - - - - - -
1.85 -0.68 0.77 1.18 0.65 -1.25 0.12 -0.37 -0.53 -0.57 -0.1 -2.89 -1.8 -1.93 0.24 -0.82 -0.38 -1.8 0.65 -0.71
-0.09 - -1.96 1.03 -2.67 -3.49 -5.05 1.68 0.92 1.31 0.17 -0.78 -0.71 0.22 -0.12 - - -0.93 1.88 -1.66
1.92 -0.51 -3.67 2.03 -0.79 - -0.25 0.46 -0.73 -0.41 0.17 -3.24 -2.16 -2.81 0.89 0.2 -3.56 -1.48 0.71 -1.03
1.42 2.52 - 3.06 - - 0.74 -0.48 -0.21 - - - - - - - - - - -
0.94 -2.01 -2.13 -0.47 -0.75 -0.77 -0.11 0.23 0.5 -0.23 1.03 -2.85 -0.85 -1.63 1.09 0.39 -0.29 -0.49 1.39 -0.54
2.73 - - - - 2.84 - -0.1 0.75 1.84 - - - - - - - - - -
3.64 - - - - - - - - 2.28 - - - - - - - - 1.43 -
0.07 0.58 - 2.12 -0.49 -0.24 1.49 -0.11 0.37 - 1.7 1.21 -1.92 -1.06 - - - - -2.2 -
1.32 - - - - - 2.49 0.13 - - - - - - - 2.91 - - 1.71 -
1.14 -2.6 -1.4 1.66 0.58 -0.74 -0.77 0.34 -1.08 -1.57 0.04 -2.71 1.01 0.53 -0.43 -1.1 -1.78 -0.8 1.27 -2.33
-1.61 - - 1.66 -0.55 - - 1.87 0.3 2.19 1.29 - 0.5 - 1.15 - - - -1.7 -
1.65 - - - - - 2.0 1.45 0.92 - 2.57 - 1.22 - - - - - - -
3.07 - - - - - - 0.4 0.49 - 2.04 - 0.72 - - - - - 1.64 -
1.98 - - - - - - 0.97 - - - - - 2.55 - - - - 3.05 -
4.19 - - - - - - 0.77 - - - - - - - - - - - -
-0.38 - 2.43 - - - 0.41 0.71 - - - - 1.22 - - 2.94 - - -0.19 -
2.11 - - - - - - -0.48 1.34 2.22 - - - - 1.85 - - - 2.05 -
4.32 - - - - - - - - - - - - - - - - - - -
0.78 1.04 - - 0.19 -1.53 - 0.21 - - -1.87 -4.75 - - 0.8 2.92 -0.16 1.38 -1.17 -
- - - - - - - 0.4 - - - - - - - 3.64 2.63 - - -
3.58 - - - - - - 0.42 - 2.74 - - - - - - - - - -
- - - - - - - 4.32 - - - - - - - - - - - -
- - - - - - - 4.32 - - - - - - - - - - - -
1.23 - -1.51 1.19 -1.51 - 1.07 -0.02 0.25 -2.25 -0.61 -3.46 0.96 0.62 0.36 0.19 -1.01 -0.01 0.81 -1.81
2.67 -0.57 0.3 - 0.72 -0.54 -1.39 -1.92 0.43 0.48 - -1.08 - -3.12 -1.96 -1.45 - -1.92 -3.34 2.14
1.15 - - - 0.47 - -11.19 2.03 - - -5.48 -1.56 2.21 2.79 -23.35 - - -13.69 -13.92 -1.4
1.55 - - 2.59 - - 0.03 -1.91 -0.81 0.07 0.84 - - - - 1.58 1.0 - 0.46 -
0.51 - - 2.82 - - -0.05 -0.33 -0.22 - 0.09 - 0.6 -0.73 - 1.62 0.61 - 0.16 -
1.74 - - 2.38 -0.91 - - -0.26 0.25 0.59 - - 0.29 0.46 0.46 0.79 - -0.95 0.22 -
1.63 0.59 -0.5 2.45 -0.46 -2.24 -1.68 -0.39 -1.22 -1.8 -1.61 -3.52 -0.52 -2.48 0.26 -0.17 -2.46 -2.76 1.31 -1.76
1.54 - - 1.37 -0.24 - -1.18 -0.46 -0.09 0.44 -0.37 -2.3 -0.35 - -0.56 -0.04 0.99 0.5 0.48 0.98
0.42 1.3 -0.39 0.67 1.06 -0.1 -0.11 0.2 0.15 0.2 -1.87 -1.16 -1.83 -2.07 -1.67 -0.54 -2.93 0.68 1.07 -1.27
- - - - - - 3.97 2.11 - - - - - - - - - - - -
0.36 -1.42 0.45 2.29 0.08 -0.28 -0.96 -0.06 -0.15 -0.82 -0.31 - 0.12 -0.46 0.07 -0.42 0.46 -2.63 -1.75 0.03
3.5 - - - - - - - - - - - 3.12 - - - - - - -
1.17 - - 0.37 0.76 - -2.18 0.37 -1.57 0.14 -1.38 - -0.6 -0.21 2.1 0.37 0.37 0.55 0.64 -
2.22 - - - - - 1.64 0.05 - 1.6 - -0.95 - - - 1.52 - - 1.62 0.74

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.