Heatmap: Cluster_252 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule
Ovule, mature
Ovule, pollinated
Strobilus, female
Ovulate strobilus
Microstrobilus
Kernel
Leaf
Leaf, female
Leaf, male
Leaf, salicylic acid
Leaf, seedling
Leaf, truncation control
Leaf, truncation treatment
Leaf, water
Yellow-green stripe leaves
Green leaves
Stem
Cambium
Root
-2.86 0.87 -2.2 -2.73 -1.12 -3.53 2.42 -1.04 -4.91 -5.88 -3.7 -5.91 -3.83 -4.69 -4.75 -7.82 -7.55 1.73 1.82 2.04
-0.12 0.47 0.27 -0.89 -0.39 1.11 1.5 -0.43 -0.19 -0.38 -1.31 -0.56 -0.21 -0.47 -1.76 -0.52 -1.49 -0.91 -0.19 1.26
-5.6 - - - - -3.27 3.49 -7.38 - - - -6.58 - - - -3.91 - - - 3.09
-5.5 - - - -2.85 -1.91 2.97 -4.76 - - -2.98 -4.42 - - -3.77 -2.52 -2.32 -4.59 2.05 2.79
- - - - - - 3.4 -8.0 - - - - - - - - - - -1.18 3.16
0.88 - -1.32 - -0.22 - 1.29 -0.69 - - - - - - - -1.03 2.69 -1.48 - 2.71
0.13 -0.4 -0.34 -0.05 -0.1 0.56 1.49 -0.07 -0.25 -0.17 -0.91 -1.21 -0.93 -1.0 -0.24 0.39 -0.63 0.07 0.88 -0.28
-4.95 -4.55 -4.38 -4.65 -3.01 -2.98 3.09 -1.48 -0.57 -1.53 -2.64 -3.78 -3.58 -1.87 -2.14 1.2 -0.45 1.05 0.79 1.04
0.13 -2.54 -0.84 0.08 -0.81 1.08 2.48 0.28 -0.49 -1.12 0.27 -1.56 -1.98 -2.0 0.53 -1.68 -1.79 -1.39 0.46 -0.7
0.72 - 0.13 1.4 -0.56 - 2.74 -3.16 -3.85 - - -1.2 -2.06 - -2.49 -0.61 - -0.77 -2.85 2.28
0.11 -0.23 -0.82 -0.54 -0.42 0.22 1.99 -1.3 -0.55 -0.39 -0.44 -1.03 -1.67 -1.82 -0.62 -0.89 -1.01 -0.65 0.79 1.68
-0.94 0.49 -0.3 -0.53 0.22 1.01 2.09 -0.37 -1.38 -1.42 -0.93 -0.78 -0.75 -0.98 -0.74 -1.36 -2.37 -0.11 1.48 -1.01
-1.82 -0.26 -3.57 -3.05 0.27 3.04 1.06 -3.98 -5.83 -6.1 -2.6 -3.04 -4.85 -4.63 -2.0 -4.41 -4.69 -1.68 -4.12 2.58
- - - - - - 3.1 -4.57 -2.88 - - - - - -4.1 - - - 1.18 3.16
- - - - - - 3.0 -3.41 -1.98 -2.39 - -4.96 -4.35 -4.82 -5.24 - -4.52 -5.2 2.77 2.15
0.64 0.43 0.22 -0.0 0.23 0.18 1.96 -1.32 -2.22 -2.55 -1.45 -2.0 -2.49 -2.73 -0.77 -2.76 -2.77 -0.17 1.09 1.63
- - - - - - 3.85 0.04 - - - - - - - - - - 2.17 -
-3.06 -3.21 -4.06 -1.38 -3.56 -3.5 3.37 -2.49 -3.74 -4.44 -2.81 -1.78 -2.68 -2.95 -2.63 -1.8 -1.08 -0.5 -2.16 2.56
0.42 - -2.91 0.75 -1.87 1.45 2.43 -0.51 -1.06 -1.31 -0.43 - -0.98 -0.76 -1.18 0.5 -0.99 - 1.28 -1.99
-2.91 -1.48 -1.89 -2.36 -3.54 2.29 2.41 -3.63 -7.22 -6.46 -5.69 -5.96 - -7.04 - -4.14 -1.92 -0.76 -5.59 2.94
0.9 0.02 -0.13 -0.4 -0.93 1.26 1.27 -0.49 -1.14 -0.98 -0.35 -1.13 -0.23 -0.12 -0.59 -0.93 -1.75 -0.58 -1.28 1.52
-5.36 -3.65 - -3.69 -4.31 3.12 -1.67 -0.55 -1.37 -0.39 0.6 0.62 -0.72 0.23 0.41 0.63 -0.36 -1.68 -5.62 -3.07
1.81 0.21 1.2 0.2 0.59 -0.83 1.73 -1.79 -2.8 -3.21 -2.04 -2.28 -4.42 -4.58 -1.75 -2.3 -1.55 -0.15 -3.48 1.84
0.35 -0.2 0.81 -1.77 -0.36 1.16 2.25 -3.11 -4.05 -4.38 -2.25 -3.21 -4.21 -3.85 -0.75 -5.36 -5.17 -1.77 1.32 1.97
-0.88 -0.43 -1.7 -1.48 -1.4 -1.76 2.01 -0.74 -0.35 -0.33 0.13 -0.15 -1.31 -0.87 0.49 -0.49 0.66 -1.25 -0.1 1.66
-0.75 -2.14 -2.26 -1.93 -1.95 -2.29 1.47 -0.4 -1.1 0.34 1.72 -1.86 0.61 -1.07 1.68 -3.05 -1.85 -0.54 -0.23 1.19
-0.14 -0.55 -0.54 -0.66 0.15 1.11 1.31 -0.27 -0.71 -0.54 -0.1 -0.49 -0.57 -0.85 -0.09 -0.26 -0.0 0.36 0.18 0.21
-0.41 -0.19 -1.07 -1.57 -1.77 2.32 2.6 -3.01 -4.16 -3.9 -3.48 -3.47 -3.43 -4.51 -4.17 -4.06 -3.74 -1.44 -1.73 2.27
-0.68 0.19 -0.01 -0.91 -0.97 -1.05 1.22 0.0 0.24 0.13 -0.93 -0.6 0.84 0.4 -1.1 -0.26 -1.55 -1.08 -1.35 1.73
-3.94 0.93 -2.3 - -1.19 -0.48 3.69 -5.03 - - - - - - -4.01 - - - -1.98 1.76
-3.24 - - -0.55 -2.25 0.21 2.97 -1.36 -0.73 -0.54 0.54 -4.23 -0.74 -1.32 -2.44 - - -0.27 -0.68 2.06
-0.29 -0.41 -0.08 0.09 0.54 -1.56 1.07 -0.62 -0.48 -0.17 0.08 -1.47 -1.33 -0.68 0.24 -0.46 -1.15 0.34 0.74 1.34
-0.49 0.15 0.49 0.24 0.72 -1.45 1.08 -0.53 -0.86 -0.53 -0.09 -1.9 -2.73 -1.73 0.3 -0.59 -1.16 0.34 1.28 0.87
-0.37 0.41 0.07 0.08 0.63 -0.7 1.09 -0.97 -0.93 -0.64 -0.43 -1.72 -3.51 -2.85 -0.18 -0.68 -1.4 0.49 1.66 1.06
-0.87 -2.45 -1.55 -0.87 -1.38 -1.07 2.58 -0.72 -1.6 -1.46 -1.62 -1.71 -0.68 -0.89 -1.19 -1.94 -1.89 0.75 1.84 1.14
-0.17 -0.3 -0.27 -0.85 -1.23 1.76 1.62 -1.16 -1.48 -1.51 -2.34 -0.98 -1.99 -2.63 -1.54 -1.2 -0.91 -0.2 0.59 2.02
0.4 - -5.0 -1.6 - -3.82 3.33 - - - - - - - - - - -4.31 -1.34 2.96
-16.32 - - -5.76 -4.19 1.59 1.92 -0.98 -0.85 -1.44 -2.3 -0.41 0.51 0.21 -2.19 -1.73 -1.51 1.28 -1.18 2.15
-1.93 -3.27 -4.44 -2.73 -4.34 2.16 2.95 -3.97 -6.01 -5.29 -2.2 -4.08 -3.17 -3.34 -3.03 - - -2.19 -1.9 2.58
-0.7 - - - - - 3.94 -2.41 - -0.53 - - -1.1 -0.11 0.2 - - - -0.65 -
-0.57 -2.43 -0.13 -0.6 -1.4 2.41 2.51 -3.44 -6.51 -7.47 -7.28 -4.86 -7.79 -5.43 -7.43 -2.15 -4.92 -0.42 -1.36 2.2
- - - - - - 4.31 -2.77 - - - - - - - - - - - -
- - - - - -1.5 3.2 -2.85 -4.43 -3.69 - - - - - - - - 2.73 1.82
-0.33 0.7 -1.37 0.47 -0.27 1.37 1.74 -0.4 -0.99 -1.12 - -1.13 -1.26 -2.11 -2.31 -0.26 -0.9 0.47 1.12 0.12
0.89 - 0.39 1.35 0.09 0.81 1.36 0.02 -0.96 -1.97 -1.66 -2.09 0.22 -0.71 -3.35 -0.56 0.3 -1.75 1.12 -1.67
-1.06 -0.8 -1.19 -1.27 -0.69 -0.36 0.36 -0.23 -0.97 -0.91 0.72 -0.77 0.21 0.07 0.93 -1.19 -1.34 0.18 1.16 1.57
-0.06 - - -1.14 -0.07 -0.1 0.92 -1.39 -1.61 -2.22 -1.81 -1.02 -0.87 -0.85 -1.14 -1.65 -1.63 -0.28 1.56 2.83
0.05 -5.23 -2.35 -9.28 -6.23 -6.28 3.19 -8.4 -9.3 -10.3 - -10.04 -11.82 -8.85 - -10.69 - -2.29 -2.86 3.21
1.09 -2.68 -1.39 - -5.15 - 2.14 -6.78 -7.72 -6.51 - -6.71 -8.52 - - - - -2.05 -1.84 3.63
-0.76 0.63 -2.51 - -2.24 -1.46 2.24 -3.64 -3.56 -2.17 -1.1 -1.78 - -3.68 -2.2 - - 0.87 0.62 2.92
-0.48 -1.16 -0.41 -0.58 0.8 -3.81 1.81 -0.91 -1.56 -2.05 0.49 -2.12 -0.92 -1.15 0.07 - - -0.71 2.49 0.13
-1.54 -1.36 -1.62 0.64 -1.68 1.06 0.88 0.72 0.28 0.22 -0.12 0.79 -0.74 0.15 0.14 -1.84 -1.12 -1.05 -0.42 0.75
-0.94 -3.5 -1.0 -0.64 -0.98 -2.06 3.01 -1.62 -3.21 -2.44 -1.53 -3.01 -5.83 -6.06 -3.87 -4.38 -3.35 -0.72 -0.24 2.74
0.22 1.15 0.98 0.7 0.97 -1.32 1.44 -3.83 -5.19 -5.28 -3.99 -4.8 -4.88 -4.51 -3.92 -5.11 -5.88 -1.63 1.8 1.89
0.58 -1.74 -0.91 -3.03 -2.64 0.37 1.05 -0.13 0.13 0.08 -0.06 -0.34 0.45 0.34 -0.14 -1.07 -0.65 -0.05 -1.62 1.71
-0.43 - - - - - 3.56 -1.45 - - - - - - 0.37 2.26 - - 0.04 -
- - - - - - 2.47 -1.23 - - - - 0.07 - - 2.94 - - 1.64 1.15
0.17 0.15 0.43 0.07 0.62 -0.02 0.52 -0.49 -0.45 -0.36 -0.16 -1.3 -1.1 -1.33 -0.13 -0.79 -1.32 0.41 1.23 0.55
-0.08 -1.05 -1.34 -0.45 -0.31 -0.48 0.85 0.36 0.04 -0.06 0.76 -0.47 -0.15 -0.23 0.47 -0.19 0.14 -0.17 -0.29 0.67
0.33 -1.92 -1.49 1.25 -0.81 2.03 0.66 -0.19 -0.81 -2.15 0.19 -3.71 -0.31 -0.91 -0.34 0.98 -0.69 -2.15 0.55 -2.13
0.25 -1.18 -1.05 -1.17 -2.22 1.52 2.76 -1.31 -4.12 -2.82 -4.38 -4.51 -5.13 -5.06 -2.76 - - 0.34 0.84 1.85
-4.09 -3.42 -2.69 -2.0 -1.73 -1.31 1.73 -1.81 -3.18 -2.71 -2.08 -4.13 -2.14 -1.68 -1.23 -2.39 -1.63 -1.73 -0.82 3.61
0.74 -2.45 -1.12 -3.17 -1.58 0.09 0.82 -1.57 -0.95 -1.34 -0.96 -2.0 -3.66 -2.68 -0.68 -3.56 -1.51 -0.01 -0.11 3.2
-1.29 -1.68 -2.58 -3.42 -2.03 -2.66 1.63 -0.3 -0.55 0.25 1.0 -0.96 1.2 0.07 1.45 -1.07 -1.06 -0.69 -0.85 1.07
-1.7 -4.13 -3.0 -3.75 -3.23 -3.8 0.29 -0.15 0.02 0.7 2.05 -0.73 1.04 0.17 1.83 -1.14 -1.28 -1.11 -2.26 0.55
-2.0 - - -3.0 - 3.35 1.8 -6.18 -6.25 -5.52 -3.78 - -4.48 -3.81 - - - -2.29 - 2.47
1.27 0.16 0.27 -0.1 0.84 -1.49 0.92 -0.46 -1.12 -1.31 0.63 -0.26 -1.34 -1.77 0.15 -2.75 -1.81 0.11 -0.37 1.15
- - - 0.87 -1.14 - 3.96 -1.91 - - -14.23 -3.12 - - - -0.4 -1.03 - -0.9 -
0.55 1.16 -1.59 -2.46 -1.43 0.69 2.13 -1.44 -0.41 -0.61 -1.44 -1.54 -0.91 -1.03 -1.39 0.19 -1.41 -0.29 -0.75 1.38
- - - - - - 4.32 - - - - - - - - - - - - -
-0.89 -1.68 -0.45 -0.7 -0.74 1.57 1.9 0.34 -0.8 -1.19 0.77 0.28 0.22 0.21 0.55 -3.12 -1.99 -1.44 -2.41 -0.72
0.56 0.75 0.19 0.23 0.18 0.08 1.64 -1.22 -2.47 -2.64 -1.07 -1.87 -1.95 -1.95 -0.74 -3.57 -3.15 -0.5 1.5 1.51
-1.07 - -1.22 - -0.86 -2.7 2.85 -1.18 - - - -4.68 -3.24 - - - - -2.95 1.94 2.73
0.39 1.8 0.54 -0.46 -0.24 -1.32 1.98 -1.93 -4.65 -3.37 -3.54 -2.55 -5.43 -6.4 -3.57 -4.57 -4.66 0.57 1.22 1.66
-2.78 - - - -3.07 -0.65 2.9 -7.58 - - - - - - - -4.47 - -4.92 -6.4 3.53
-0.57 0.28 -0.79 0.04 0.01 0.7 1.25 -0.21 -1.24 -0.93 -0.16 -0.96 -1.38 -0.57 0.25 -2.12 -2.0 0.14 0.71 1.49
-0.85 0.21 -1.32 -0.19 -0.22 -0.88 1.52 -0.28 -0.06 -0.02 0.54 -0.54 -1.98 -2.02 0.6 0.03 -0.7 -0.11 0.99 0.36
-2.59 - -4.63 -2.07 -4.69 -4.44 3.37 -6.86 - - - - - - -4.86 - - -1.74 -2.91 3.11
0.63 -3.0 -1.09 -2.46 0.44 -0.13 2.42 -2.05 -1.98 -2.58 -6.51 -2.79 -7.82 -3.55 -4.35 -1.07 -0.42 -1.68 -3.19 2.9
-0.82 - -1.33 -1.62 -2.2 0.72 2.35 -0.32 0.04 0.02 -0.37 -0.88 -0.17 -0.68 -0.02 -1.3 -1.36 0.44 -0.26 1.06
-1.47 -2.27 -2.44 - -2.06 1.15 3.31 -2.99 -5.98 - -2.95 -2.62 -4.61 - -3.62 - -2.47 -4.48 -3.32 2.59
-1.07 -2.19 -1.24 - -1.12 1.46 3.28 -2.6 -4.44 -4.19 -2.83 -1.95 -6.53 -4.8 -2.94 -3.2 -2.52 -3.16 -2.94 2.18
0.54 -0.87 -0.29 -0.09 -0.47 -1.13 2.64 -0.85 -3.3 -2.92 -3.0 -2.26 -2.23 -2.46 -3.27 -3.13 -2.07 1.58 0.61 1.24
2.18 -0.49 0.19 -0.13 -0.07 0.91 0.65 -1.73 -3.69 -2.94 -2.3 -1.65 -2.02 -1.23 -2.18 -4.14 -2.25 1.3 -0.93 1.65
- -3.49 -4.24 -4.53 -6.08 -3.9 3.56 -2.8 -6.84 -3.56 -2.59 -2.0 -7.41 -5.13 -2.19 -4.73 -4.16 -4.1 - 2.78
-1.48 0.26 -0.26 -2.52 -0.71 -1.89 1.96 -0.48 -0.22 -0.18 0.36 -1.24 -1.97 -2.49 0.84 -1.83 -2.26 0.22 1.25 1.16
0.39 0.71 0.76 0.2 0.78 -2.73 1.13 -1.2 -0.81 -1.06 -0.82 -2.14 -0.78 -0.63 -0.88 -0.5 -0.74 -1.27 0.43 1.61
0.99 -0.16 0.75 0.49 0.57 -1.79 0.4 -0.59 -0.33 -0.53 -0.85 -1.07 0.36 -0.04 -0.61 -0.54 -0.81 -0.61 -1.76 1.4
0.24 -0.91 -0.5 -1.17 -0.15 -1.18 1.74 -1.12 -0.02 -1.46 0.87 -3.17 -1.38 -0.98 0.75 -0.27 -2.2 -0.1 1.24 0.84
-1.2 -1.46 -1.96 -4.28 -1.16 2.39 2.01 -1.67 -2.6 -2.0 -2.39 -2.59 -4.97 -5.44 -2.32 -1.25 -2.22 -1.1 0.54 2.4
-0.27 -1.53 -1.56 -0.65 -0.98 -0.95 0.73 0.1 0.26 0.22 1.5 -0.31 -0.63 -1.05 1.55 0.02 -0.27 -0.57 -2.0 0.33
0.46 -1.4 0.74 -0.48 -0.35 0.88 1.58 -0.52 0.07 -1.43 -0.31 -1.07 -1.84 -0.91 -1.3 -0.72 -0.26 -0.37 1.65 -1.94
-0.42 - -4.35 -1.13 -2.03 3.89 -5.19 -1.36 -2.42 -1.76 -1.28 -1.61 - -6.81 -0.86 -4.72 - -1.22 -1.06 -0.96
-2.8 0.12 -1.19 -2.14 -0.15 - 1.45 -0.11 -0.48 -0.26 -0.31 1.06 -0.31 -0.1 0.14 -0.39 0.16 0.7 -2.05 1.33
0.41 -0.03 -0.3 0.23 -0.17 0.25 0.68 -0.26 -0.03 -0.12 0.4 -0.98 -0.72 -0.47 0.37 0.15 -0.46 -0.07 0.38 -0.4
0.14 -0.25 -0.67 0.48 0.42 0.38 1.24 -1.39 -2.2 -2.32 -2.76 -1.41 -3.23 -2.12 -2.54 0.15 -0.77 0.49 1.54 1.68
0.79 -0.41 -1.57 1.72 - -0.23 2.5 -1.12 -1.75 -0.8 -1.61 - -1.08 -0.24 -0.78 0.59 - -1.75 0.66 -1.15
0.01 - -1.34 0.36 -1.18 -0.07 1.77 -1.45 -1.53 - 0.17 - -1.13 -1.23 - 2.68 - -1.51 1.41 -1.43
-0.0 -2.13 - 0.71 -0.51 -1.7 2.39 0.38 -0.81 -0.94 -1.31 -3.04 0.17 -0.4 0.34 0.82 0.09 -3.75 0.89 -3.67
-0.14 -2.58 -1.87 -0.71 -1.79 -0.23 1.35 -2.96 - -4.57 0.66 - -2.24 - -0.59 - - -4.92 1.23 3.23
-0.52 -2.41 -2.16 -3.45 -2.26 2.51 1.56 -0.74 -0.99 -1.38 -1.62 -0.87 -2.97 -2.71 -1.83 -2.0 -2.84 -0.33 -0.34 2.33
-0.75 1.37 - - - - 3.26 -0.85 - - - - 1.24 -1.3 - 0.5 0.7 - -0.22 -
- - -1.19 - 0.9 - 2.04 -0.81 -0.19 -0.46 - -1.15 -1.44 - -0.32 -0.49 - 0.3 2.17 1.75
1.03 -2.58 0.25 0.66 0.29 -0.26 1.74 -0.87 0.21 0.74 -0.11 -1.67 -2.81 -1.27 0.2 -0.46 -2.14 -2.57 -0.05 0.25
0.45 1.23 -0.57 -1.58 0.09 -0.12 0.97 -0.1 -0.33 -0.08 -0.68 -0.53 0.31 -0.19 -0.85 -0.62 -0.39 0.21 -1.15 0.73
- - - - - 4.26 - - -0.15 - - - - - - - - - - -
-2.35 1.18 1.91 -0.27 0.67 -0.49 1.94 -1.35 -2.77 -1.21 -0.7 -2.05 -1.65 -3.0 -0.6 -2.69 - 0.71 -0.46 0.44
-1.38 -1.32 -0.55 -0.0 0.17 -1.77 2.38 -0.98 0.32 -0.5 -1.2 -1.16 -0.67 -1.85 -2.04 1.0 0.03 -1.73 -0.98 1.38
-1.6 -0.25 -0.8 0.93 1.35 -1.11 3.02 -3.51 -6.7 -7.74 -7.28 -3.46 - -10.69 -5.72 -2.37 -1.85 -0.48 -0.57 1.64
-1.23 -0.6 -1.5 -0.93 -0.24 -0.35 0.62 -0.19 -0.45 -0.49 0.38 -0.59 -0.53 -0.77 0.49 0.01 -0.49 0.57 1.18 1.29
- - - - - - - 2.51 - - - - - - - - - - 3.84 -
- - - - - - 3.35 -6.14 - - - - - - - - -1.69 - - 3.25

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.