Heatmap: Cluster_97 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg cell
Ovule
Uninucleate microspore (Col-0)
Uninucleate microspore (Ler-0)
Pollen (bicellular, Col-0)
Pollen (late bicellular, Col-0)
Pollen (bicellular, Ler-0)
Pollen (tricellular, Col-0)
Pollen (tricellular, Ler-0)
Pollen (mature, Col-0)
Pollen (mature, Ler-0)
Sperm
Pollen tube (Col-0)
Flower (receptacles)
Flower (floral buds)
Flower (sepals)
Flower (petals)
Flower (stamen filaments)
Flower (anthers)
Flower (carpels)
Flower (stigmatic tissue)
Pedicel
Axis of the inflorescence
Silique
Silique (senescent)
Pods of siliques
Pods of siliques (senescent)
Embryo
Endosperm
Seed
Seed (young)
Seed (germinating)
Seedling
Seedling (etiolated)
Meristem
Stem (internode)
Stem (internode, senescent)
Stems
Leaf (rosette)
Epidermis cells
Mature guard cells
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
Root (apex)
Root (stele)
Root (QC cells)
Root (tip)
- - - - -0.75 0.95 -0.19 3.43 4.26 1.88 3.18 - -0.98 - - - - - 0.14 - - - - -5.8 - - - - - - -1.7 - - - - - - - - - - - - - - - - -
AT1G09080 (BIP3)
-7.77 -4.44 -4.0 -2.05 -1.79 -3.69 -2.98 -5.05 4.63 -6.62 4.23 -4.71 -1.2 -6.08 -5.02 -2.11 -7.39 -9.72 -1.14 -5.25 - -7.16 -6.07 -5.77 -3.99 -6.43 -0.96 -8.14 -1.58 -8.45 -5.63 -4.26 -3.96 -3.36 -7.0 -5.45 -2.04 -3.06 -1.76 -2.54 -3.99 -4.09 -6.59 - -6.0 - - -3.69
AT1G09180 (ATSAR1)
-1.72 -1.61 -0.15 1.66 0.24 1.1 1.53 1.33 3.78 -1.82 3.04 -0.04 1.55 -2.24 -2.15 -3.01 -3.67 -3.76 -0.5 -2.4 -5.23 -3.34 -4.26 -1.86 -2.93 -1.91 1.44 -0.8 -2.95 -7.36 -2.74 -2.32 -2.92 -4.5 -2.86 -1.99 -1.08 -1.88 -1.1 -6.58 - -2.45 -4.36 -4.36 -3.94 -6.19 -11.81 -6.09
- - - -3.51 - -2.66 -2.24 -2.28 5.31 -5.22 2.59 - -3.87 - - - - - -5.36 -7.15 - - -2.97 - - - -2.97 - - - -6.98 - - -5.47 -7.77 -4.6 -0.23 -2.19 -5.76 - -2.75 - - - - - - -
1.56 -3.16 0.15 -0.28 -0.13 -0.51 -0.31 -2.05 3.86 -3.91 4.22 -0.32 -1.65 -3.83 -3.15 -6.31 -5.6 -8.54 -1.49 -4.98 - -3.58 -8.24 -3.36 -6.95 -4.54 -2.32 -5.3 1.86 -8.03 -3.47 -3.89 -4.39 -4.14 -4.94 -4.75 -4.75 -5.55 -1.95 -1.53 - -2.32 -5.34 - -4.81 -5.21 - -5.05
- - - -2.0 - - -1.96 - 4.85 -3.63 4.21 - - - - - - - - - - - - - - - - - - - - -3.64 - - - - - - - - - - - - - - - -
- -9.19 -0.89 0.28 0.43 1.38 1.0 2.09 3.75 1.9 3.51 -7.78 0.59 -7.0 1.1 -9.0 -8.99 -5.46 1.71 -5.62 - -10.85 - -5.72 -8.22 -6.37 -4.59 -10.3 -9.19 -12.19 -6.05 -4.87 -9.25 -7.01 -10.71 -7.61 - -8.52 -9.67 - - -3.38 -3.13 -9.75 -2.84 - - -6.18
AT1G51490 (BGLU36)
-10.26 -9.38 -7.62 -5.65 -7.46 -8.01 -4.96 -1.77 4.02 0.37 4.82 -8.83 0.75 -8.56 -3.08 -11.28 - -8.26 -3.91 -6.75 - - - -6.88 -9.08 -10.33 -7.91 - -10.07 - -8.78 - -12.65 - - - -10.43 -12.7 -11.21 - - - - - - - - -11.27
AT1G61290 (SYP124)
-0.17 -6.04 -2.89 -4.04 -2.47 -1.51 -3.38 2.12 3.39 3.43 3.18 -4.85 1.65 -4.38 1.75 -6.04 -5.38 -4.37 2.11 -3.7 -7.35 -7.6 -6.52 -4.97 -8.32 -5.43 -4.29 -2.62 -3.06 -7.64 -5.23 -7.42 -7.72 -8.49 -6.26 -6.37 -5.14 -7.31 -5.97 -6.34 - -6.96 -7.15 -8.87 -8.46 - - -7.61
-1.75 -2.69 -2.22 -1.81 -0.9 0.86 -0.78 2.38 3.54 2.45 3.44 -4.87 1.11 -3.35 1.22 -3.85 -3.73 -3.84 1.64 -2.72 -4.39 -2.77 -2.5 -3.58 -4.04 -3.79 -4.1 -2.6 -1.15 -4.34 -3.0 -2.62 -4.21 -4.5 -3.46 -3.3 -3.3 -3.67 -4.35 -4.63 -3.79 -5.02 -3.2 -2.09 -3.29 - - -3.0
- -0.34 - - - -6.18 -3.76 -0.44 4.11 -5.84 2.58 - - -3.24 0.48 -3.34 -0.13 -2.05 0.14 -0.44 4.18 -6.24 - -8.51 -5.21 - -3.45 - - - -2.83 -7.49 -6.06 - - - - -9.29 -7.52 -5.76 - - - - - - - -
- - 2.28 3.54 - 0.98 3.86 - 3.06 - 2.73 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - -0.93 - - -1.13 - 4.95 - 3.99 - - - - - - - - - - - - - - - - - -3.14 - - - -5.84 - - - - - -7.08 - - - - - - - - -
- - - -0.01 1.92 -0.38 1.04 - 4.31 - 4.33 - - -2.03 - - - - - - - - - - - - - - - - - - - - - - - -5.53 -2.77 - - - - - - - - -
- -3.75 - - - 1.16 - 4.1 - - - - - - 2.1 - - - 0.41 -1.95 4.5 - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - -0.44 -1.79 -1.34 1.35 -0.81 3.59 2.98 -0.68 0.08 - -2.58 - 1.78 - - - 0.24 -1.18 4.05 - - - - - - - - - - - - - - - - -4.75 - - - - - - - - - -
- -6.08 -5.96 -0.08 -3.53 -4.91 0.88 -4.33 5.41 -6.83 0.88 - -4.38 -7.96 - - - - -1.67 -6.14 - -5.66 -4.86 -4.86 - -7.57 - - -7.24 -6.69 - -6.25 - - -8.16 - - -7.47 - - - - - -4.82 - - - -
AT2G39890 (PROT1)
-7.16 -2.34 -3.35 -2.59 -2.83 -1.12 -2.32 1.32 3.56 2.37 4.11 -6.86 -0.88 -0.11 -1.61 -1.25 -2.23 -2.45 0.92 -2.94 -3.69 -2.27 -2.55 -2.26 -4.61 -2.09 -1.03 -2.28 -0.76 -7.99 -3.71 -1.5 -3.22 -3.16 -3.08 -0.39 -1.32 -1.83 -2.28 -5.03 -5.41 -2.6 -2.92 -4.21 -3.25 -11.07 -2.32 -4.87
-6.43 -8.37 -5.11 -7.2 -5.57 -3.01 -4.61 1.54 3.5 2.4 4.49 -4.98 1.37 -5.9 -1.89 -6.44 -6.44 -4.93 1.4 -5.58 -9.51 -9.22 - -5.62 -10.04 -6.18 -5.1 - -4.94 - -6.74 -12.41 -10.27 - -8.86 -11.22 -9.11 -11.61 -9.4 - - - - - -11.12 - - -
-10.42 - -4.48 - -4.1 -2.05 - 3.51 4.67 1.63 2.4 -6.98 -2.78 - 1.15 - - - - - - - - -9.52 - - - - - - - - - - - - - - - - - - - - - - - -
AT2G46860 (PPa3)
-9.05 -9.53 -3.53 -0.89 -0.96 1.4 0.33 2.84 4.0 1.47 3.43 -8.5 0.57 -7.76 -0.39 -9.09 -8.32 -5.77 1.77 -6.25 -10.07 -9.69 - -5.96 -8.25 -7.21 -4.41 -8.73 -9.78 -11.37 -6.9 -3.52 -7.75 -8.13 -10.88 - -11.58 -10.83 -10.01 - - -2.18 -3.99 -6.97 -3.79 - -15.36 -6.99
AT3G11900 (ANT1)
-4.19 -2.22 -0.92 -0.14 -0.19 0.72 0.31 1.97 3.08 0.8 2.78 -1.16 -0.69 -1.28 -0.59 -1.44 -1.87 -2.89 0.58 -2.2 -1.98 -2.68 -3.32 -1.57 -1.46 -1.26 0.53 -1.96 0.4 -1.6 -2.48 0.27 -1.41 -1.25 -4.13 -2.61 -0.51 -1.37 -0.17 -1.1 0.36 0.94 0.92 -1.96 -1.32 -1.76 -1.66 -0.47
-3.18 -0.43 -2.41 -2.04 -1.95 -4.75 0.21 -6.43 5.02 - 0.99 -3.01 - -0.71 -1.65 -1.26 -1.75 -3.24 -3.1 -0.54 -1.42 -0.48 -0.57 -1.24 - -1.69 -1.87 -0.49 -4.68 -6.16 -0.08 -1.35 -2.94 -2.09 -0.46 -2.19 -1.91 -2.12 -3.25 -2.68 - -3.31 -2.12 -2.9 -2.48 - -2.07 -1.54
- -9.44 -6.22 -0.99 - -4.54 -0.88 -2.66 4.28 -2.75 4.5 - - - -4.68 - - - -4.55 - - - - -2.15 - -3.44 - -4.04 2.02 - - - - -7.98 - - - -10.08 - - - - - - - - - -
-7.19 - -1.8 -0.65 0.98 3.1 2.93 1.81 4.55 -2.07 0.56 - -3.49 - -2.72 - - - -3.26 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - 2.97 - - 3.17 - 3.34 - 3.71 - 2.81 - - - - - -0.5 - - - - -5.65 - - - - - - -2.58 - - - - - - -6.03 - - - - - - - - - -
- -5.43 -3.61 -3.05 - - - -3.39 4.63 - 4.5 - - - - - - - - - - - - -3.3 - -4.23 - - -2.65 - -5.58 - - - - - - - - - - - - - - - - -
AT3G27503 (SCRL19)
- -12.38 -3.51 -5.87 -4.96 0.04 -2.06 3.82 4.7 -1.52 2.04 - -1.59 - -0.95 - - -7.4 0.32 -11.81 - - - -10.78 - -10.61 - - - - - - -10.93 - -10.45 - -8.42 -8.93 - - - - - - - - - -
0.31 3.42 - -2.85 - - - - 3.4 -4.48 2.76 - - -0.64 0.22 2.39 -0.65 - -4.47 1.57 0.12 - - -0.68 - -0.34 -2.97 - -0.04 - 1.9 - -4.25 - -5.2 - - -5.01 -2.25 - - - - - -2.75 - -5.62 -
-3.2 -3.2 -0.58 2.3 1.48 1.6 3.37 0.83 3.35 0.33 3.05 -1.78 -1.52 -4.41 -2.12 -5.21 - -2.65 -0.64 -3.94 - -4.62 - -3.57 -4.6 -4.69 -1.94 -0.07 -1.0 -5.99 -4.66 - - -4.72 -4.77 - -2.08 -4.91 -4.09 - - -2.19 -4.1 - - - - -3.73
- - - -5.97 - - -2.34 -2.69 5.2 - 3.43 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - -2.27 -1.12 -0.08 3.05 5.07 -2.58 1.52 - - - - - - - 0.52 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-0.31 -5.22 -0.37 2.99 -0.79 -1.16 3.38 -1.41 3.84 -0.55 2.95 -5.76 -0.18 -3.45 -1.28 -7.63 -6.85 -6.14 -1.04 -6.01 -7.84 -7.15 - -5.47 -5.44 -6.64 -5.09 -5.6 -1.48 -7.36 -6.28 -6.49 -4.74 -6.83 -5.75 -7.71 -4.29 -3.5 -6.02 -0.32 -2.25 -4.4 -5.32 -5.46 -3.93 -3.71 -9.82 -5.07
- 0.06 - - - - - - 4.25 - 4.78 - - - - - - - - - - - - - - - - - - - - - - - - - - -2.56 -2.2 - - - - - - - - -
- - -1.02 - - - -1.78 - 5.46 - 1.24 - -1.2 - - - - - - - - - - -8.33 - - - - -1.51 - - - - - - -2.81 - -5.84 - - - - - - - - -4.92 -
- - - - - - - - 3.48 - 5.2 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
AT4G10595 (LCR2)
- -7.37 -2.79 -1.74 -1.68 -0.58 -2.05 3.08 4.76 -0.67 1.25 - - - 2.26 - - - 1.52 - - - - -6.02 - -5.18 -3.97 - - - - - - - - - - - - - - - - - - - - -
-0.25 -3.9 0.06 -1.83 2.49 0.03 0.06 -3.33 4.21 -4.23 4.14 -0.75 -2.18 - - - - - -1.94 -4.69 - - - -2.8 - -4.33 - -3.68 -4.16 - -4.23 - - - - - -2.19 -4.75 -4.73 - - - - - - - - -
-13.74 -8.54 -3.5 -2.29 -4.76 -1.74 -2.03 2.6 3.96 2.34 3.91 -3.96 -1.26 -6.02 0.69 -10.57 -8.72 -5.94 1.36 -5.49 - - - -5.55 -9.06 -6.41 -4.82 - -0.83 - -7.44 -11.34 -12.05 -8.12 -10.55 - - -10.48 -9.06 - - -4.48 - - -7.24 - - -
-2.64 0.42 -1.29 -0.4 -1.24 -2.33 -0.97 -3.89 3.9 -7.23 2.99 -7.34 -3.41 -0.54 0.36 -1.53 -0.86 -1.74 -3.1 0.13 -0.47 -1.41 -0.7 0.98 -4.04 1.2 -2.03 -0.07 -1.37 -1.89 -0.69 -1.6 -1.4 -1.85 -1.28 0.67 -0.44 0.23 -0.68 -2.74 -1.89 -0.62 -0.9 -1.23 -1.57 - -4.2 -1.92
- -6.73 0.28 1.79 -0.12 0.79 3.05 - 4.01 -5.05 3.76 - -4.17 - -2.41 - - - -4.25 - - - - -5.41 - - - - -0.67 -1.54 - -4.09 -0.78 -3.4 - - -3.65 -4.38 -3.91 -3.44 - - - -2.8 - - -2.06 -
AT4G28680 (TYRDC)
-9.84 0.55 -3.76 -4.42 -4.39 -0.62 -3.23 3.63 2.96 -0.18 0.83 -10.31 0.17 -0.36 1.08 -1.12 -4.44 -2.94 1.06 1.16 3.16 0.39 0.75 -1.82 -9.33 -2.99 -6.56 -3.43 -9.37 -10.79 -2.96 -2.26 -3.15 -3.21 -2.39 -1.21 -10.16 -2.23 -10.72 - - - - - - - - -
AT4G29880 (PIRL7)
1.05 -4.51 -3.42 -3.46 -3.52 -0.92 -1.85 2.37 4.48 -1.71 3.8 - -8.93 -5.65 -0.27 -7.11 -7.45 -5.84 0.69 -4.47 -5.99 -7.42 -5.87 -6.87 -8.22 -6.84 -6.47 -4.08 -3.32 -7.4 -5.39 -7.37 -7.2 -6.38 -6.04 -5.61 -5.86 -5.73 -6.01 -4.58 -8.42 -5.76 -4.32 -4.03 -6.25 - - -5.44
AT4G37720 (PSK6)
-3.29 - -2.05 - - - - -1.34 3.85 1.16 4.21 -6.77 3.34 - - - - - -0.08 -4.53 - - - -3.51 - - -3.32 - -4.82 - -3.04 - - -4.59 -4.56 -2.44 - -5.69 -3.75 - - - - - - -2.01 - -
AT4G38590 (BGAL14)
-4.78 -6.53 -0.3 3.25 0.32 0.34 3.48 1.2 4.17 -3.54 1.36 -2.62 -2.16 -8.95 -1.52 -8.73 -8.22 -7.86 -2.44 -7.71 -8.83 -8.72 - -8.5 -9.46 -8.81 -9.05 -8.35 -5.05 -9.03 -7.33 -7.72 -8.86 -8.13 -8.53 -7.25 -7.25 -8.09 -9.56 -4.01 - -9.06 - - -6.64 -7.63 - -10.17
1.71 -8.61 -0.25 1.48 0.57 1.95 2.24 1.85 4.53 -2.12 1.55 -1.56 -1.9 -7.24 -1.54 - - - -2.4 -10.68 - - - -6.65 - - -6.88 -6.88 -6.71 - -8.49 -9.19 -8.86 - - - - -11.31 -9.76 - - - - - - - - -
-2.96 -3.1 -2.07 -2.71 -1.91 -1.03 -2.1 2.32 3.99 1.7 3.88 -8.12 -2.8 -3.25 -0.36 -3.65 -3.84 -3.69 2.04 -3.14 -3.8 -3.46 -3.55 -3.62 -4.49 -3.57 -2.73 -3.74 -5.74 -5.16 -3.61 -3.78 -3.67 -3.55 -3.66 -3.33 -3.44 -3.07 -3.54 -5.0 -5.74 -3.79 -3.61 -3.09 -3.72 -4.31 -4.9 -3.64
-4.27 -3.47 -1.71 -5.18 -1.7 -2.16 -4.24 -0.84 4.01 -0.24 4.67 -9.9 1.61 -5.42 -3.73 -10.9 -8.74 -7.66 -1.11 -4.51 - - - -5.11 - -7.09 -8.2 - -5.86 - -2.28 - - - -12.54 - - -13.43 -11.32 - - - - - - - - -
AT5G19360 (CPK34)
-10.96 -8.31 -5.2 -5.87 -4.65 -3.0 -4.35 1.56 3.63 2.25 4.34 -7.56 1.18 -5.58 -0.71 -8.07 -7.71 -5.39 1.85 -5.11 -7.12 - -9.29 -5.12 -7.52 -5.7 -4.2 -7.31 -6.61 -10.34 -5.46 -12.53 -10.91 -12.88 -9.91 -10.87 -7.38 -10.12 -8.88 -6.02 - -9.88 -9.8 -10.21 - -0.59 -6.17 -9.63
-4.3 2.66 - - - - - -3.27 4.77 - 3.06 - -1.14 -3.75 0.05 - - - -2.39 0.43 - - - -4.35 -3.43 -5.12 - - -4.36 -4.8 1.36 - - - - - - - - - - - - - - - - -
- -5.26 - -4.01 - -2.43 -3.06 1.95 4.54 0.59 3.8 -6.15 -1.73 -4.98 -2.61 -4.12 - - -0.8 -5.89 - -3.27 -5.61 -2.45 -2.71 -2.15 0.62 - -7.03 -7.46 -8.13 -4.08 -4.28 -5.13 -4.88 -1.59 -1.25 -2.22 -2.74 - - -1.68 - - -3.27 - - -
AT5G48375 (TGG3)
- -9.17 -5.72 -6.18 -4.62 -0.08 -1.61 2.21 5.13 -1.47 1.76 - -6.42 -4.67 -1.04 -5.22 -7.35 -6.54 -2.06 -6.07 - -3.4 -6.08 -5.91 - -7.24 -6.03 -7.04 -6.5 - - - -6.87 - -8.62 -6.15 -7.04 -8.03 -6.52 -0.47 0.57 - - - - - - -
-2.95 -0.74 -1.14 -0.11 -0.77 -0.29 0.04 1.52 2.71 2.4 3.5 -1.91 1.34 -1.01 -0.85 -1.19 0.05 -0.24 0.9 -1.18 -1.41 -2.11 -2.94 -1.45 -2.74 -1.31 -0.88 -2.9 -2.28 -2.3 -1.89 -1.7 -2.77 -0.96 -2.91 -0.52 -0.3 -0.89 -0.76 -3.25 -2.3 -0.96 -0.84 -2.58 -3.06 -3.31 -1.97 -2.87
-3.38 -4.25 - - - - 1.03 - 5.3 - 2.69 -6.45 - - - - - - - - - - - - - - - - - - -4.94 - - - - - - - - - - - - - - - - -
AT5G59370 (ACT4)
-10.79 -8.96 0.09 -0.06 0.77 1.53 0.69 2.66 3.7 1.59 3.51 -7.84 1.46 -7.05 -0.29 -8.98 -9.23 -5.84 1.25 -6.21 -10.88 -10.05 -9.65 -6.75 -9.26 -7.4 -5.04 -10.52 -7.9 -13.03 -6.99 -8.5 -10.44 -9.23 -10.05 -8.06 -9.42 -9.4 -9.55 -12.19 - -9.65 -8.99 -9.65 -8.68 -8.8 -11.91 -10.34

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.