Heatmap: Cluster_8 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg cell
Ovule
Uninucleate microspore (Col-0)
Uninucleate microspore (Ler-0)
Pollen (bicellular, Col-0)
Pollen (late bicellular, Col-0)
Pollen (bicellular, Ler-0)
Pollen (tricellular, Col-0)
Pollen (tricellular, Ler-0)
Pollen (mature, Col-0)
Pollen (mature, Ler-0)
Sperm
Pollen tube (Col-0)
Flower (receptacles)
Flower (floral buds)
Flower (sepals)
Flower (petals)
Flower (stamen filaments)
Flower (anthers)
Flower (carpels)
Flower (stigmatic tissue)
Pedicel
Axis of the inflorescence
Silique
Silique (senescent)
Pods of siliques
Pods of siliques (senescent)
Embryo
Endosperm
Seed
Seed (young)
Seed (germinating)
Seedling
Seedling (etiolated)
Meristem
Stem (internode)
Stem (internode, senescent)
Stems
Leaf (rosette)
Epidermis cells
Mature guard cells
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
Root (apex)
Root (stele)
Root (QC cells)
Root (tip)
AT1G01530 (AGL28)
1.29 1.28 - -2.34 - -2.81 - -1.87 -1.01 - -0.22 - - -0.38 -1.26 -1.35 - - -1.23 -0.28 - - -2.26 3.39 - 1.86 - -2.21 3.94 - 2.43 - -3.59 -3.44 -0.34 -0.74 -2.5 -0.23 -4.72 - - - - -1.66 - - - -3.43
2.36 1.51 - -5.48 - -5.84 - -2.6 -5.8 -6.57 -6.66 -1.53 -0.99 1.02 -3.49 -4.26 - -6.88 -3.68 -0.6 -3.83 - -4.52 3.98 -5.9 2.03 - -0.43 1.89 -8.34 3.52 -6.67 -8.42 - -4.96 -6.55 -5.74 -6.53 -9.32 - - - - - -6.47 - - -
- -7.96 - - -4.71 - -4.02 - - - - - - - - -5.13 - - -4.88 -7.15 - - - 4.45 - 2.84 - -3.99 4.17 -5.86 -2.09 -6.11 -4.37 - - -3.11 -1.96 - - - - - - - - - - -
- -3.22 - - - - - - -5.72 - -4.92 - -6.2 1.12 - -6.37 - - - -5.67 -3.97 - -5.37 4.27 - 1.91 -5.23 -1.43 3.94 -7.15 2.72 -7.35 - - -5.28 - - -7.36 -7.99 - - - - - - - - -
-2.84 1.76 - -3.54 - -3.26 -3.48 - - -5.23 - 0.74 -3.42 0.94 -2.5 -4.59 - - -6.19 -1.66 -3.7 - - 3.87 -2.17 2.0 -3.11 0.25 3.72 -6.32 2.67 -5.57 - - -4.63 - -4.46 -4.46 - - - - - - - - - -
AT1G23145 (RALFL2)
- - - - - - -1.16 - - - - - - 2.06 - - - - -2.14 - - - - 3.28 - 0.07 - - 3.01 - 4.61 - - - - - - - - - - - - - - - - -
AT1G23147 (RALFL3)
-5.43 -4.7 -0.62 -3.5 -1.97 - -1.93 - -2.7 - -1.89 - -1.85 -2.22 - -3.49 - - -0.73 -6.51 -3.6 - - 4.42 - 3.06 - -0.03 3.05 - 2.58 -5.66 - - -7.19 - - - - - - - - - - - - -
1.64 1.29 - - -5.67 - - -1.99 - 0.17 - - -3.08 -1.1 -3.41 -4.31 - - -1.12 -0.02 -4.31 - - 3.13 -6.48 1.57 -6.19 -0.91 4.38 - 2.5 -6.61 - -8.3 -4.11 - -6.24 -5.94 - - - - - - -4.98 - - -7.2
- -4.54 - - - - - - - - - - - 1.7 - - - - - -4.26 -0.91 - - 4.05 - 1.34 - - 2.73 - 4.16 - - - - -0.78 - - - - - - - - - - - -
AT1G60983 (SCRL8)
- - - - - - - - - - - - - - - - - - - -3.62 -0.07 - - 4.48 - 3.01 - - 4.05 - - - - - - - - -4.1 - - - - - - - - - -
- 1.38 - - - - - - - - - - - 1.75 2.01 - - - - -2.14 - -0.5 - 1.53 - 1.17 - - 3.62 - 4.18 - - - - - - -5.19 - - - - - 0.61 - - - -
AT1G75250 (RL6)
-3.03 -3.77 - - - - - - - - - -5.65 - 0.11 3.61 0.79 -0.9 -2.35 -6.76 -5.37 -3.44 -5.25 - 3.21 - 1.97 - -3.7 -0.64 -5.68 -5.64 0.39 1.19 -2.77 0.44 -1.11 1.47 0.33 2.64 - - -2.82 0.61 -0.98 - - - -4.92
3.12 1.5 2.43 -0.62 1.11 - -2.3 -4.91 -3.24 -3.97 -3.68 -5.34 0.38 -0.66 -2.3 -4.9 - - -0.59 0.3 - -4.81 - 3.19 -4.78 1.51 - -2.17 1.59 -4.64 2.98 -6.37 -5.64 - -3.8 - - -1.73 -4.76 - - - -4.29 - - - - -5.47
1.02 2.71 - - - - - - - - -4.63 - - -1.8 -0.4 -3.49 - - - 0.85 -3.3 - - 3.82 -3.32 2.54 - 0.97 3.32 - 2.14 - - - -7.22 - - - - - - - - - - - - -
- -1.21 0.32 -0.8 - - -0.75 - - - - - - - - -0.81 - - - -1.85 - - - 4.87 - 3.15 - -0.67 1.91 - -2.2 - - - -5.07 -0.78 - -1.31 - - - - - - -0.71 - - -
- -2.84 2.84 2.36 2.32 -1.03 1.82 -2.42 - -3.58 -1.65 - 2.89 - - -2.52 -3.78 -3.04 -1.71 -4.68 - - - 3.02 -2.35 1.96 - -1.46 1.57 -3.78 -4.01 - -3.35 -5.83 - - -1.97 -4.95 - - - -0.58 - -2.91 -0.03 - -7.89 -
-9.27 -6.32 - -6.58 - - - - - - - -7.61 - - - -3.99 -6.75 - -8.18 -6.53 -4.79 - - 4.58 -6.96 3.48 - 0.96 3.41 -8.3 -3.34 -7.55 - -5.93 -8.8 - -6.73 - -6.72 - - - - - - - - -
-1.73 -0.95 - - - - - - 1.2 - 1.0 - - -0.68 - - - - - -2.46 - - - 4.18 - 2.71 - 1.68 3.77 - -0.89 - - - - - - -5.28 - - - - - - - - - -
AT2G25230 (MYB100)
- -4.31 - - - - - - - - - - - -2.1 - -1.36 - - - - - - - 3.4 - 2.66 - 1.36 4.6 - - - -1.61 - - - - -3.69 -1.71 - - - -0.26 - 0.75 - - -1.44
AT2G26320 (AGL33)
- -3.53 - - - - - - - - - - - -2.38 - - - - -5.12 -4.36 - - - 3.65 - 2.4 - -1.38 4.76 - 1.13 -5.5 - - - - - - - - - - - - - - - -
1.71 -0.2 - - - - - - - -1.85 - - 0.04 -1.29 - - - - - - - - - 3.98 - 3.23 - 0.86 3.91 - -2.64 - - - - - - -4.66 - - - - - - - - - -
AT2G35670 (FIE2)
-0.75 2.41 -1.63 -1.87 -0.33 -1.11 -3.7 -2.33 -2.61 -3.8 -1.07 -4.36 -4.51 -0.3 1.04 -4.32 -3.31 -2.8 -2.83 0.2 -3.87 -5.17 - 2.92 -5.0 1.68 -2.8 -0.62 3.39 -4.17 2.21 -4.37 -2.13 -1.98 -3.51 -3.73 -1.18 -2.0 -2.34 0.48 -1.56 -1.42 -0.66 -1.48 - 1.44 -4.08 -1.26
- -1.1 - -23.72 -3.32 - - - - - -5.19 - - -1.75 - -6.17 -14.16 - -6.76 -3.22 -14.98 - -16.71 3.92 -0.63 2.02 - -0.45 4.19 -0.22 0.97 1.96 -2.2 -2.49 -7.48 -17.15 -19.94 -4.84 -22.38 -4.95 - -2.56 -1.9 -4.48 - - -9.27 -1.1
-2.29 -2.79 3.09 0.09 2.62 -0.07 0.37 - - -4.64 - - - -2.0 -3.92 -6.01 -5.13 -2.47 -1.48 -4.3 -6.12 -3.58 -3.41 2.6 -3.53 0.86 -0.04 -2.87 2.3 -6.22 -1.73 -2.71 -3.82 -4.86 -0.67 -0.29 3.14 0.23 -6.42 - - -1.18 -1.84 0.11 -2.09 - - -1.1
AT2G44690 (ROP8)
-0.22 0.84 -7.39 -5.21 -6.66 - -7.16 - -6.56 -8.78 -5.28 - 3.15 1.02 -2.66 -1.09 -3.74 -1.42 -1.61 0.26 -3.38 -0.23 -0.33 1.97 -4.71 0.83 - 1.65 1.13 -7.94 2.77 -1.61 -1.47 -1.59 0.74 1.59 -3.43 0.78 -4.93 -4.19 - -0.52 0.03 -1.82 -0.82 0.71 - -1.82
-1.16 -3.96 - -1.61 -3.72 - - -4.8 - - - - - 1.39 - - - - -5.88 -3.66 -2.11 - - 3.22 - 1.33 - -2.14 4.16 - 3.81 - - - - -3.26 - -7.74 - - - - - - - - - -
3.6 -0.93 -2.61 - - -2.62 -4.38 1.21 -0.04 -3.65 -3.39 - -3.45 -6.95 -1.84 -5.25 - - -3.28 -2.31 -5.36 - - 3.06 -5.49 1.94 - -1.31 3.15 -6.0 -1.3 -2.94 -4.35 -5.76 -7.66 - -5.4 -9.77 - - - -3.23 - 2.6 -0.1 - - 0.69
-3.54 -0.04 -2.05 -3.88 -5.98 - -2.47 -3.04 -3.48 -5.49 -2.0 -4.67 0.28 -2.6 - -6.53 -4.59 - -4.58 -3.17 -2.93 - -4.44 4.84 - 2.98 - -3.07 2.39 -4.15 0.94 -5.43 - -5.18 -5.44 -5.52 -3.82 -5.91 -9.27 - - - -5.43 - -5.43 - - -6.61
- -1.11 - -0.6 - - - - - - - - 2.23 -0.03 - - - - - - - - - 4.0 - 1.65 - - 3.69 - 3.18 - - - - - - - - - - - - - - - - -
- - - - - - - - -4.12 - - - - - - -3.77 - - - - -4.11 - - 4.9 - 3.62 - 0.37 1.98 - -3.57 - - - -5.75 - -3.92 - - - - - - - -2.66 - - -
AT3G43505 (LCR30)
-0.72 -0.55 - -4.94 - - - - - - - - - 1.52 - -4.92 - - -6.53 -2.88 -5.04 - - 3.15 -0.21 2.13 - 0.12 4.37 -0.37 2.78 -6.6 - -4.26 -6.57 - - - - - - - - - - - - -
AT3G48231 (LCR48)
-0.93 1.86 - - - - -6.3 - - - - - - 1.4 -2.95 -5.51 - - -6.32 -1.31 -4.15 - - 3.82 -4.04 2.5 -2.94 -0.99 3.04 -8.09 3.56 -6.54 - -4.46 -8.47 -5.33 -5.51 - - - - - - - -5.25 - - -
AT3G61175 (LCR52)
- -5.2 - - - - - - - - - - - -0.75 - - - - - - - - - 4.57 -1.5 2.56 - - 4.02 - 0.26 - - - - - - - - - - - - - - - - -
AT3G61177 (LCR53)
- - -2.16 - - - - - - - - - - 0.61 - - - - - - - - - 4.38 - 2.08 - - 3.7 - 3.05 - - - -6.28 - - - - - - - - - - - - -
-2.7 -3.42 - -0.04 - - - - -0.14 - - - - - - - - - - - - - - 4.69 - 2.84 - - 3.69 - - - - - - - - - - - - - - - - - - -
- -5.0 - - - - - - - - - - - - - - - - - -6.47 -2.73 -3.45 - 4.33 - 3.29 - 0.71 3.85 - -6.01 - - - -2.53 0.09 - -1.26 -6.25 - - - - - -3.41 - - -
- - -1.17 - - - - - - - - - - - - - - - -0.11 - - - - 3.81 - 1.99 - - 4.76 - - - - - - -0.69 - -2.28 - - - - -0.6 - - - - -
1.13 1.43 - - - - - - - - - - - -3.46 - - - - - -0.22 - - - 3.69 - 1.83 - -0.59 4.62 - -1.11 - - - - - - - - - - - - - - - - -
- 2.03 - - - - - - - - - - - 2.19 - - - - - -2.95 - - - 3.45 - 1.06 -3.0 -3.01 3.25 - 4.04 - - - - - - -7.46 - - - - - - - - - -
-5.59 -2.37 - - - - - - - - - - - -0.12 - - - - - -5.16 -2.48 - - 3.72 -2.53 2.14 - - 4.46 -2.92 2.72 - - - - -2.13 - -6.23 - - - - - - - - - -
-0.49 -3.55 - - - - - - - - - - - -1.52 - -3.02 - - -2.14 -3.89 - - - 4.4 -0.73 3.42 - 0.92 3.32 -3.75 0.9 - - -3.04 -4.43 - - -4.74 - - - - - - - - - -
1.15 2.2 -3.92 -3.75 - - - - - -3.74 - - - -3.85 0.94 -2.19 -2.5 -5.04 -1.08 1.23 -0.5 - - 3.6 - 2.09 - -1.6 3.74 - 2.3 -6.72 - -6.97 -5.96 -4.71 - - - - - - - - - - - -
-4.94 -0.53 - - -4.01 -5.18 - - -6.14 - -6.37 - -1.4 1.4 -4.73 -4.82 - - -6.16 -2.44 -3.74 - -5.82 4.12 -1.91 2.15 - -1.99 3.7 - 3.06 -5.22 -8.21 -5.64 -8.44 - -5.69 -7.71 - - - - - -5.13 -4.71 - - -
- -5.55 - -2.27 - - - - - - - - - - - - - - - - - - - 4.63 - 3.04 - -0.53 3.76 - -0.85 - - - - - - - - - - - - - - - - -
- -4.74 - -1.28 - - 0.84 - - - - - - - - -2.27 - - - -4.03 -1.38 - - 4.81 - 2.92 - -1.13 3.11 - -2.06 - - - -5.06 - - - - - - - - - - - - -
- -6.16 -2.52 -0.43 - 0.02 -2.43 - - - - - - - - -1.9 - - - - -2.82 - - 4.25 -2.88 3.89 - 1.35 3.03 - -3.92 -3.22 - - -4.27 - -1.64 -6.88 - - - - - - -2.37 - - -
-5.15 -2.87 - - - - - - -0.49 - - -1.24 - -1.84 - - - - - -2.89 - - - 3.66 - 2.38 - - 4.32 - 3.1 - - - - - - - - - - - - - - - - -
AT5G18290 (SIP1B)
-1.06 1.85 -1.94 -0.41 -3.05 -6.87 -0.56 - - -9.22 -7.54 - -7.34 -0.12 -2.42 -1.93 -3.36 -3.24 1.06 0.19 -4.7 -3.14 -2.45 2.63 -3.2 0.49 -2.03 1.72 3.13 -5.19 3.1 -0.6 -0.15 0.04 -1.1 -3.17 -1.83 0.33 -0.87 -4.65 - -0.34 -1.44 -0.69 -0.45 - - -0.81
- -2.08 - - - - - - - - 0.25 -1.97 - 1.46 - - - - -1.56 -2.03 - - - 3.22 - 2.53 - 0.42 3.75 0.11 3.42 - - - - - - - - 0.34 - - - - - - - -
AT5G19650 (OFP8)
3.0 2.57 -1.94 -2.55 -2.7 -3.22 -5.53 - - - - - - -2.06 -0.01 -4.29 - - -5.78 2.14 -5.29 0.39 -1.04 1.98 -5.57 0.91 - 1.76 0.49 -6.91 2.87 -3.85 -1.08 -3.15 1.23 -2.0 -4.19 0.73 -2.83 - - -3.17 -5.1 0.37 -0.22 - -9.36 -1.12
- -3.57 2.92 1.97 3.32 2.42 0.15 -2.22 - -3.27 - - -2.45 0.62 - -0.2 - -0.56 -0.15 -1.65 - -0.88 - 2.72 - 0.84 - -0.22 1.9 - -2.36 -3.92 -2.19 -3.92 -1.81 - -1.81 -1.9 - - - - - - -1.84 - - -
- 0.51 - -2.64 -1.72 -1.91 - - - -3.97 - - - -0.32 - -1.6 -1.71 - -2.87 -0.97 -0.48 -0.69 - 3.86 -1.89 2.6 -1.62 0.49 3.69 -3.43 0.42 -3.3 -2.39 -0.76 -3.82 0.18 -1.02 -1.16 -0.85 - - -1.63 -0.23 -0.96 -2.55 - - -3.72
-4.28 -2.21 -1.67 -1.75 -1.09 -4.55 -4.03 - - - - - - 0.31 - -3.57 - - - -2.72 -1.1 -2.07 -0.23 2.98 -4.33 2.15 -1.31 -2.37 2.17 -4.84 2.04 -1.72 -2.09 -1.05 -2.98 3.13 -1.34 1.1 0.14 - - 1.18 0.26 -2.4 -1.66 2.06 - -1.98
- -4.66 -0.56 -0.27 -1.45 - - - - - - -2.12 - - - - - - -2.98 -3.44 -1.71 - -1.38 4.64 - 3.36 0.71 - 2.66 - -0.61 -1.12 - - - - -1.53 -3.4 -2.79 - - - - - - - - -
-5.88 -7.37 - - - - -6.51 - - - -6.7 - - - - -3.3 - - -8.55 -8.35 -4.73 - - 4.56 -4.35 2.84 - 3.38 2.58 -8.41 -3.81 -7.02 - - -5.65 -6.61 -5.63 -1.18 - - - - - - -5.51 - - -
- -7.12 - -5.06 - - - - - - - - - -2.36 - -6.04 - - -4.8 -7.73 -2.68 - -5.05 4.18 0.36 2.58 - 3.81 2.7 -1.87 -0.76 -5.05 - - -7.31 - -5.2 -0.6 - - - - - - - - - -
AT5G42797 (LCR28)
- -2.22 - - - - - - - - - - - -0.12 - - - - - - - - - 2.96 - 3.06 - 1.46 4.59 - 1.99 - - - - - - - - - - - - - - - - -
-4.94 -3.4 -3.46 -4.04 - - - - - - - -7.82 -3.4 4.21 -0.74 1.55 - - -1.24 -4.86 - - - 3.16 -0.08 0.87 1.96 -3.01 2.12 -5.93 1.58 -4.22 -1.3 -2.68 -6.45 - - -5.94 0.24 - - - - -3.46 -4.05 - - -5.14
AT5G48945 (LCR46)
- -2.45 - -2.28 - - - - - - - - -4.22 0.31 - - - - -4.99 -4.85 - - - 4.2 - 2.11 - -3.25 4.28 - 1.88 -4.56 - -3.96 - -2.37 - - - - - - - - - - -7.8 -
-1.01 0.9 - -6.68 - - - - - - - - - -0.0 -1.33 0.18 -2.24 - -2.97 0.64 1.21 -0.51 0.07 2.87 -0.17 1.89 3.54 0.03 2.08 -4.34 -0.92 -0.9 -1.41 -2.0 -0.55 0.4 -1.39 0.4 -2.55 -4.53 - -4.07 -3.42 0.59 -1.39 - - -0.53
0.01 0.63 -1.88 - - -1.69 -1.37 - - - - - - 1.38 - - - - - -0.79 - - - 3.35 - 0.61 - - 3.39 - 4.18 - - - - - - - - - - - - - - 0.02 - -
- -6.7 - -1.4 - - -3.83 -1.61 - - -3.51 - - -3.35 - -4.48 - - -1.7 -7.14 -3.82 - - 4.59 - 2.9 - -3.35 3.54 - -1.73 - -5.87 -5.7 -6.59 0.79 - -4.27 - -0.98 - -2.47 -3.38 - -1.38 - - -
-5.2 -4.82 -6.11 -5.93 - - - - - -6.25 - - 1.84 -1.14 - -5.32 - - -4.6 -7.15 -4.62 - - 3.96 - 1.51 - 0.57 4.01 -7.66 2.86 -7.91 -5.15 - -4.0 -3.59 -6.08 -4.01 -9.52 -3.87 - - - -2.92 -4.23 - - -5.36

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.