Heatmap: Cluster_56 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Archegoniophore (female)
Antheridiophore (male)
Antheridium (male)
Sperm
Sporeling
Thallus
Thallus (vegetative)
Thallus (MpPAP1OX-1)
Thallus (Tak1-2)
Thallus (MpPAP1OX-3)
Thallus (MpPAP1OX-2)
Thallus (Tak1-3)
mid rib (male)
Gametophyte
Gemmaling (female, hpt2040)
Gemmaling (male, hpt2040)
Gemmaling (BC3-38)
Gemmaling (Tak1)
Gemmaling
Gemma cup
gemma cup (male)
Aseptically grown rhizoids, thalloid, gemmae
0.62 0.39 0.1 -4.88 0.62 -0.11 0.87 -0.18 0.12 -0.14 -0.07 0.18 -0.38 -1.02 -0.29 -0.36 -0.32 -0.43 0.05 0.09 -0.01 0.38
0.82 -1.67 -2.25 -5.04 0.25 0.92 0.72 -0.46 -0.63 -1.25 -1.03 -0.53 -0.21 0.2 0.26 0.27 0.27 0.21 -0.13 -0.7 -0.27 1.52
-1.76 - 2.0 0.38 - 0.04 1.44 - - - - - - - - 0.22 - - - - 1.78 3.01
-1.76 - 2.0 0.38 - 0.04 1.44 - - - - - - - - 0.22 - - - - 1.78 3.01
0.6 0.89 -4.11 -3.31 0.34 0.41 1.27 0.25 -0.47 -0.82 0.15 -0.21 -0.32 -0.46 -0.31 -0.25 -0.3 -0.07 -0.47 0.26 0.2 0.01
0.57 0.65 0.28 -4.48 0.29 0.04 0.67 -0.11 -0.01 -0.41 -0.29 -0.02 -0.49 -0.7 0.04 -0.2 -0.1 -0.04 0.8 -0.18 -0.12 -0.52
- - 1.71 2.63 0.58 1.34 -0.87 - - - - - 1.77 - - -0.8 0.26 0.14 - - 0.76 -
0.18 -1.72 - -1.73 - 2.23 -1.03 - - -2.6 - -2.54 -1.55 0.15 1.76 1.45 2.55 -0.48 -2.92 -2.23 -2.66 -3.43
1.64 0.37 - -2.3 - 0.87 1.73 -0.23 -2.91 -0.14 -1.18 -1.96 -0.0 1.66 -0.26 -0.45 -0.28 -0.13 -0.49 -1.92 -2.08 -0.05
- - - 4.43 - -0.97 - - - - - - - - - - - - - - - -
- - - 4.39 - -0.04 - - - - - - - - - - - - - - - -
- - - 0.55 - 0.1 1.27 - - 3.34 - - - - - - - 2.78 - - - -
0.83 -1.12 -2.23 -5.3 0.52 -0.1 1.22 -0.2 0.36 -0.18 -0.27 0.32 0.01 0.49 -0.58 -0.27 -0.71 -1.29 -0.04 -0.21 -0.36 1.12
-3.09 0.12 - 3.42 -1.55 0.9 0.89 - - - - 1.64 -0.53 0.04 - -0.71 - - - -0.69 - -
1.34 2.29 -4.57 -2.01 - 0.51 1.96 -2.38 -0.44 -5.0 -3.71 -1.23 -0.3 1.61 -3.38 -5.5 -2.08 -2.19 -2.61 0.15 0.82 -4.7
- - - 0.84 - 1.59 3.35 - 0.28 - 2.54 - - - - - - - - - - -
-2.27 - - 1.52 -1.06 2.53 2.84 -0.85 - - - - - -2.58 0.27 - -1.64 -0.51 0.69 -0.11 - -
-0.02 -0.02 -1.51 1.8 -0.57 0.26 1.28 -0.47 0.06 -0.85 -0.94 -1.0 -0.24 -0.77 -0.17 0.17 -1.08 -0.47 0.12 -0.77 -0.38 0.57
0.73 - - 0.04 -4.97 1.82 2.83 - - -1.5 -1.67 -0.53 -1.03 0.89 -0.42 0.67 -0.48 -0.91 -0.27 -2.4 -2.44 -2.8
-0.83 -1.13 - 0.72 -0.31 1.5 2.37 -0.42 - - - - -0.61 - - - 0.97 -0.16 - 0.21 - 2.36
1.55 -1.6 - -3.59 -4.48 0.93 1.69 0.12 0.66 -0.15 0.41 0.41 -0.64 -0.1 -5.31 -0.4 -0.37 -0.77 -0.08 -1.22 -1.44 0.86
- - - 4.42 - -0.7 - - - - - - - - - - - - - - - -
-5.28 -4.68 - -0.56 -2.88 1.04 2.96 -2.88 -5.09 -0.44 -0.39 - -0.3 2.21 -3.71 -2.65 -2.08 -3.05 0.72 -1.96 -2.95 0.64
0.19 1.55 0.84 -2.11 - 1.16 0.5 -0.28 0.34 -1.17 -0.56 -0.58 -2.14 -2.42 -0.65 -0.62 -0.77 -0.17 -2.05 1.29 0.99 -0.91
-2.72 - - -0.29 0.76 1.67 2.36 - 1.09 - - - - -1.8 - - - - - - 1.33 2.61
-1.9 -1.66 0.02 0.85 -3.09 0.94 -0.58 -2.65 -1.71 -1.32 -1.4 -0.76 0.49 1.91 1.54 0.17 0.88 0.3 -2.15 -1.44 -0.89 -0.65
-0.7 -1.77 -1.71 -1.44 -4.12 1.03 2.12 - 0.52 - -10.37 0.1 0.04 -0.31 -7.65 -3.55 -10.19 1.77 1.79 -0.02 0.49 -1.83
0.64 -0.86 -3.77 -2.34 0.34 0.07 1.58 1.04 0.89 0.41 0.54 0.67 -1.24 1.48 -2.37 -2.53 -1.8 -3.15 -3.01 -0.08 -0.37 -2.32
-0.03 -0.08 -1.49 -6.63 0.2 -0.16 1.04 0.42 0.74 0.09 0.29 0.73 0.03 -0.74 -0.5 -0.54 -0.41 -0.57 -0.11 -0.06 -0.06 0.44
0.8 0.43 -3.7 -6.44 0.39 0.06 0.6 -0.48 0.3 0.28 -0.13 0.43 -1.44 -0.75 0.33 0.4 0.4 0.32 0.36 -0.85 -0.56 -0.14
0.44 -0.46 -0.97 -3.53 0.23 0.16 1.16 -0.35 -0.25 0.16 -0.5 0.73 -0.5 0.33 -0.72 -0.7 -0.61 -0.68 -0.25 0.02 0.09 1.2
-0.73 - - 0.31 - 0.42 1.84 - - -0.05 0.37 1.01 0.05 -1.59 -0.61 -0.73 -0.7 - 0.62 1.7 0.89 0.12
- - - 0.74 -7.2 0.44 -0.8 0.18 0.59 -0.24 -0.69 1.36 -3.06 2.39 -3.24 -2.24 -1.22 -0.78 1.56 0.24 -0.18 -
-1.29 -1.6 -3.16 -2.32 2.52 -0.7 2.87 -0.87 -0.33 -0.01 1.44 -0.81 -3.74 0.0 -6.27 -8.02 -5.83 -6.76 -3.15 -2.09 -2.79 -3.86
1.79 0.66 -1.23 -3.3 0.36 1.25 1.21 -1.57 -0.9 -1.15 -1.6 -1.02 -2.03 -0.24 -0.06 0.02 0.07 -0.1 -0.16 -0.05 0.04 -1.39
0.94 0.03 0.04 -2.9 -0.29 -0.33 0.67 0.12 0.46 -0.18 0.07 0.26 -0.17 0.52 -0.72 -0.78 -0.58 -0.63 0.03 -0.77 -0.62 1.02
-0.2 0.11 -0.28 -4.98 -0.37 -0.15 0.77 0.11 0.48 -0.15 0.15 0.65 0.4 0.12 -0.15 -0.13 -0.1 -0.19 -0.75 0.36 0.13 -0.39
0.4 0.33 -0.26 -6.64 0.11 -0.11 0.46 0.29 0.32 0.42 0.23 0.36 -0.99 0.0 -0.44 -0.5 -0.32 -0.43 0.29 -0.47 -0.41 0.8
-2.0 -2.71 0.36 2.97 -0.17 2.38 1.82 - - -2.47 - - - 0.7 -0.45 -1.63 - - - - - -
0.65 -0.2 -1.54 -5.5 -0.42 0.38 1.02 -0.09 0.47 -0.0 -0.04 0.25 -0.39 -0.52 0.27 0.32 0.14 0.21 -0.12 -0.71 -0.59 0.34
-1.61 -2.96 - 1.76 - 2.5 0.73 0.59 -1.47 -0.26 -1.16 -1.53 -2.64 1.37 - -0.76 -3.23 -1.09 - 1.08 -0.06 -1.42
0.37 -0.04 -0.99 -5.99 0.19 -0.2 0.84 0.32 0.34 0.1 0.23 0.36 -0.16 -0.19 -0.33 -0.4 -0.34 -0.44 0.02 -0.2 -0.26 0.84
- - - - - 1.9 1.32 - - - - - 1.36 2.3 - 2.23 - 1.83 - - - -
1.15 1.02 -3.4 -5.61 0.08 -0.82 0.41 0.63 -0.68 0.12 0.03 -0.85 -0.68 -0.18 -0.61 -0.41 -0.76 -0.46 -0.06 -1.23 -0.97 1.9
- - - 2.43 -2.22 3.05 1.73 -1.85 - - 0.02 -0.93 -2.15 0.68 -2.51 - -2.47 -0.93 - - - -1.82
1.49 0.63 -0.45 -3.06 0.32 -0.34 1.85 -1.5 0.47 0.08 -0.08 -0.1 -0.14 -0.24 -0.93 -2.6 -0.59 -1.32 -3.29 -0.2 -0.22 0.2
- - - 3.64 -2.58 1.96 1.1 - 0.61 - - - -0.4 -2.04 - - - - - - - -0.33
-1.16 - - -2.31 - 2.27 4.05 - - - - - - - - - - - - - - -
3.09 - - -4.5 2.48 -2.9 2.28 - -3.34 -4.58 - - - 1.41 - - - - - -3.66 - -
-2.95 -1.78 -1.05 0.23 - 1.07 1.43 - 0.77 - - 1.3 1.77 -0.89 -0.75 0.3 1.19 0.84 - 0.16 - -
- -5.73 -5.29 -2.17 -2.46 1.19 -0.47 -2.55 -0.73 -3.33 -1.76 0.22 -1.04 2.86 -0.41 -1.36 0.46 0.5 1.26 0.16 -0.04 -4.13
-4.18 -1.77 -2.42 0.92 - 3.04 1.76 - -2.53 -0.4 -3.26 - 0.67 1.72 - - -0.17 -1.51 -2.98 -0.89 -2.64 -
-22.55 -2.47 - 1.83 - 3.08 0.94 -1.89 - 0.82 - - 0.56 1.8 - - -1.44 -3.52 - -21.03 -1.1 -
- -1.41 -0.91 3.85 - 0.68 0.96 - - -0.44 - 0.0 -0.51 -1.2 - - -1.87 - - - - -
- - - 3.08 - 3.12 1.87 - - - - - -2.24 - - - - -1.39 - -0.76 - -
-3.67 -4.15 - 1.37 -4.5 -0.11 1.84 -0.97 - 1.47 1.44 - -4.55 -2.63 - - - - - - - 3.09
- - - 3.12 -0.43 -0.17 2.03 - - 1.64 0.24 - - -2.51 - - - - - - - 1.65
- - - - -1.53 0.29 3.24 - - 2.64 - - -0.34 -2.52 - - - - - - - 1.91
-3.67 -4.15 - 1.37 -4.5 -0.11 1.84 -0.97 - 1.47 1.44 - -4.55 -2.63 - - - - - - - 3.09
-4.33 -2.74 - 1.69 - -0.17 2.54 -1.48 - 1.78 0.87 - -3.15 -1.71 - -20.75 - - - -2.51 - 2.5
- - - 2.61 - 0.97 -0.54 0.41 - 1.74 0.13 - -0.63 2.16 0.7 -0.42 - - - - - -
-5.98 - - 0.69 -2.77 1.58 4.09 - - - - - -2.56 - - - - -8.6 - - - -
0.75 0.39 0.64 -2.95 1.04 0.58 1.45 -0.3 -0.13 -0.37 -0.36 -0.72 -0.64 -1.32 -0.53 -0.59 -0.54 -0.79 -0.44 -0.4 -0.24 0.21
-0.77 - - -0.92 -3.12 1.37 2.04 - - - - - -3.52 -1.94 - - - -3.86 -0.15 - - 3.67
-1.76 - - 1.34 -4.62 0.87 1.88 - - - -2.49 - - -0.96 - - - - - - - 3.69
0.74 - - 2.04 0.14 0.02 1.82 - 1.66 -0.04 - 2.02 -1.2 -1.58 - - - -1.73 - -1.24 -0.1 -
0.48 0.38 0.69 1.1 1.41 0.44 1.12 -0.33 - 0.12 - 0.59 0.3 0.31 -1.76 - - - - -1.67 1.05 -0.3
0.12 0.51 - 2.56 - 1.82 2.02 - - - 0.39 - - -1.57 0.42 -0.71 0.63 - - -0.24 - -
-6.96 -4.79 - 0.57 -7.04 2.43 0.84 - -3.25 -4.36 -3.2 -1.72 -0.09 2.38 0.31 -0.81 1.27 -0.62 - -0.99 0.16 -4.19
-2.05 -1.78 -2.17 -0.63 -8.92 1.41 -0.19 - -3.22 -5.07 -3.8 - -0.92 3.27 -0.13 -1.33 1.2 1.19 -1.34 -2.88 -2.08 -
0.58 - - 1.44 -0.18 2.02 3.3 - - - -1.05 - - -0.44 - - -0.49 - - - 0.12 -
-3.88 - - 1.96 - 2.52 0.5 - - -2.25 - - -0.33 2.38 - -2.12 0.99 1.03 - -1.17 - -
-4.87 -3.38 - 1.03 - 2.15 1.0 -2.81 - -2.95 - - -2.87 3.18 -3.07 -3.22 0.69 -2.39 - -3.21 0.64 -2.06
-6.97 - - 0.56 - 2.29 0.3 - - - -5.85 - -1.41 3.49 -1.12 - 0.14 -0.06 - - -2.45 -4.67
- - - 0.03 -0.26 3.56 2.85 - - - - - -1.76 - - - - - - - - -0.17
-4.32 -6.45 - -0.31 -5.95 2.29 -2.59 - - - - - -3.12 1.31 1.52 0.26 2.16 2.24 -3.76 -4.06 -3.88 -
-1.59 -6.67 -6.82 -3.37 -1.33 1.61 -1.59 -6.66 - -4.25 -4.41 -4.77 -2.2 2.2 1.82 0.52 1.82 1.72 -0.92 -3.89 -2.09 -2.49
- 0.74 - 1.46 -4.24 0.82 2.61 -2.01 - 0.53 0.15 - -2.04 0.52 -0.12 -0.78 -0.31 1.06 - - - -0.39
- 0.74 - 1.46 -4.24 0.82 2.61 -2.01 - 0.53 0.15 - -2.04 0.52 -0.12 -0.78 -0.31 1.06 - - - -0.39
-5.2 - -3.3 0.03 -0.56 0.73 3.17 -2.43 -3.78 0.46 0.55 - -3.66 2.55 - - - - - -2.99 -1.37 -
-3.88 - - 0.89 1.4 0.99 3.16 -1.56 -3.6 -0.71 -0.26 -3.07 -1.99 1.81 - -3.41 - - - -2.55 -3.19 -1.37
-3.88 - - 0.89 1.4 0.99 3.16 -1.56 -3.6 -0.71 -0.26 -3.07 -1.99 1.81 - -3.41 - - - -2.55 -3.19 -1.37
-4.26 - - 0.82 -4.35 1.38 0.86 - 0.31 -3.06 - 2.11 -2.86 2.97 -2.5 -1.56 -4.09 -1.18 -1.85 -2.76 -1.59 -1.74
1.22 -0.1 -2.67 -4.7 0.29 0.12 1.41 -1.31 1.21 -0.93 0.0 0.68 0.16 0.16 -1.3 -1.33 -1.17 -0.99 -0.05 0.15 -0.71 0.09
0.05 0.36 -0.12 -4.59 0.33 -0.37 0.86 0.03 0.36 -0.19 0.11 0.29 -0.25 0.35 -0.55 -0.42 -0.44 -0.47 0.02 0.27 0.27 -0.06
- - - 2.24 -3.73 0.4 1.93 - - - - - - - - - - - - - - 3.6
-6.63 - - -3.82 - 0.52 2.82 -0.04 -1.73 0.1 0.09 -1.98 -3.43 -1.82 - -6.52 -5.33 - -5.76 -5.46 -4.91 3.21
- - 2.35 - -0.83 -9.66 -25.94 - - 4.03 - - - - -14.3 -22.09 - -7.7 - - - -
0.16 -2.65 -4.69 -1.15 0.26 -0.58 1.36 0.28 - 0.03 -0.9 -3.93 0.46 -1.67 -0.39 -0.08 -0.23 -0.9 -4.32 -0.75 -0.36 2.75
1.28 0.59 -0.71 -3.12 0.46 0.27 1.23 -0.98 -0.41 -1.54 -1.62 -0.13 -0.59 0.06 0.12 0.02 0.29 0.18 0.39 -1.28 -0.51 -0.02
-0.41 -2.39 - 0.04 - -2.36 -0.8 2.12 2.61 2.51 - 1.18 -1.75 -0.8 - - - - - - - -
- - - 4.42 - -0.79 - - - - - - - - - - - - - - - -
1.18 -3.92 0.91 -17.8 -5.63 1.75 -1.12 -2.1 -3.32 0.43 -6.34 0.74 -0.38 - -2.98 -2.79 -1.5 0.57 -7.02 -0.08 2.76 -28.99
-2.88 -0.15 1.71 2.86 -5.51 0.06 0.04 - - - - -1.68 -2.76 2.95 - - - - - -2.94 - -
- - - 1.41 - 1.79 -0.59 - - - - - -1.12 0.14 2.24 0.73 1.26 1.44 0.66 - - -0.85
- 0.5 -0.01 0.58 -1.08 0.33 -0.39 1.14 - - - - - -0.24 -0.58 1.16 - - - - 0.92 2.96
-1.24 -0.94 - 2.38 -1.09 0.6 -0.01 - - - - - -0.73 -0.52 0.55 1.76 1.72 0.33 1.11 - - -
- - - -3.1 - 2.2 1.85 - - - - -1.71 -0.9 1.93 0.3 -0.79 1.36 1.36 - -1.39 -0.8 0.17
-1.16 -2.8 -2.21 -1.31 0.67 1.64 3.88 -4.21 - -4.37 -4.36 - -5.3 -1.38 -3.43 -1.56 -3.27 -3.17 - -4.32 - -2.97
-0.56 -0.14 -1.75 -6.88 -0.35 0.21 0.13 0.17 0.49 0.24 0.2 0.78 0.83 -0.25 0.12 0.13 0.03 -0.25 -1.22 0.15 0.17 0.23
- - - 4.32 - 1.01 - - - - - - - - - - - - - - - -
- - - 4.35 - 0.68 - - - - - - - - - - - - - - - -
0.52 -0.66 -5.97 -4.93 -0.48 -0.01 0.66 0.78 0.1 -0.21 -0.03 0.16 -0.43 0.21 -0.27 -0.01 0.17 -0.04 0.08 0.22 0.16 0.76
0.3 0.71 0.33 -5.04 0.51 0.05 0.66 -0.12 0.03 -0.27 -0.13 0.1 -0.13 -0.18 -0.25 -0.32 -0.36 -0.29 0.24 0.1 0.09 -0.55
0.67 0.41 -0.29 -4.77 -0.2 0.5 0.53 -0.89 0.89 -0.62 -0.31 0.83 -1.42 -0.22 -0.2 -0.14 -0.14 -0.12 -0.23 0.28 0.22 -0.33
0.49 0.46 0.08 -2.29 -0.06 0.18 0.77 0.02 0.23 -0.25 -0.06 0.26 -0.28 0.53 -0.42 -0.48 -0.43 -0.5 -0.18 0.11 -0.1 -0.15
0.24 -0.33 -0.72 -6.16 -0.37 -0.24 0.79 -0.06 0.64 -0.33 -0.08 0.63 0.27 0.28 -0.57 -0.55 -0.46 -0.51 -0.58 0.51 0.65 0.45
0.76 0.29 -0.46 -5.53 -0.03 0.08 0.85 -0.04 -0.05 -0.55 -0.58 -0.2 -0.53 0.61 0.1 -0.15 0.03 0.02 0.17 -0.51 -0.2 0.5
1.16 -1.61 -0.15 -0.67 1.33 -0.23 1.9 -1.02 -0.05 -2.28 -0.32 -1.1 0.15 -0.38 -0.7 -2.78 -1.56 - - - -0.22 2.01
2.56 - - 3.0 - 3.02 - - - - - - - - - - - - - - - -
0.14 2.36 - 3.45 -0.85 1.01 - - - - - - - 1.2 - - - - - - - -
1.09 - - 1.1 -2.49 3.06 3.17 - - - - - - -2.39 - - - - - - - -
- - - 0.65 - -1.66 0.07 - - 2.64 2.19 - - -0.77 - - - - - - - 2.94
-3.95 -4.63 - -1.87 -6.91 -0.83 1.95 0.95 - 1.74 1.78 - -2.86 1.02 -3.05 -3.7 -2.62 -2.79 -1.99 -2.87 - 2.44
-4.21 - - -0.16 - -1.11 1.73 0.89 - 1.83 1.7 -3.39 -2.43 1.48 -4.29 -4.06 -2.61 - -1.51 -2.97 -2.83 2.22
1.57 - - 2.66 0.73 2.4 -0.45 - - - - - 2.11 -0.48 - - - - - - - -
0.35 0.77 0.93 -5.48 0.57 0.08 1.22 -0.29 0.11 -1.0 -0.69 0.08 -0.08 -0.06 -0.71 -1.88 -0.66 -0.73 -0.6 0.0 -0.01 0.56
0.39 -0.3 -0.75 -4.21 -0.23 -0.1 0.76 -0.04 0.49 -0.32 -0.27 0.47 -0.32 -0.55 -0.04 -0.21 0.15 0.01 -0.36 0.5 0.5 0.4
-4.34 -4.41 - 0.35 -5.23 2.56 - -2.8 1.89 -2.39 -2.54 2.59 - -0.39 - - - - -0.06 -1.33 -2.92 1.15

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.