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Heatmap: Cluster_231 (HCCA)

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(Showing raw values)

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Gene
Egg cell
Ovule
Uninucleate microspore (Col-0)
Uninucleate microspore (Ler-0)
Pollen (bicellular, Col-0)
Pollen (late bicellular, Col-0)
Pollen (bicellular, Ler-0)
Pollen (tricellular, Col-0)
Pollen (tricellular, Ler-0)
Pollen (mature, Col-0)
Pollen (mature, Ler-0)
Sperm
Pollen tube (Col-0)
Flower (receptacles)
Flower (floral buds)
Flower (sepals)
Flower (petals)
Flower (stamen filaments)
Flower (anthers)
Flower (carpels)
Flower (stigmatic tissue)
Pedicel
Axis of the inflorescence
Silique
Silique (senescent)
Pods of siliques
Pods of siliques (senescent)
Embryo
Endosperm
Seed
Seed (young)
Seed (germinating)
Seedling
Seedling (etiolated)
Meristem
Stem (internode)
Stem (internode, senescent)
Stems
Leaf (rosette)
Epidermis cells
Mature guard cells
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
Root (apex)
Root (stele)
Root (QC cells)
Root (tip)
4.65 0.74 3.23 0.24 1.45 4.93 0.41 96.65 185.71 1074.66 342.95 6.34 3.44 5.64 51.71 0.79 1.0 6.1 814.06 7.84 0.12 0.04 0.0 7.33 1.27 4.44 11.77 0.0 0.28 0.18 3.44 0.02 0.06 0.0 0.76 0.01 0.35 0.09 1.03 0.0 0.0 0.11 0.0 0.0 0.02 0.0 0.0 0.0
5.67 0.35 2.27 0.42 1.37 9.88 1.48 127.17 260.19 486.13 365.11 2.93 17.6 2.88 32.39 0.37 0.43 2.64 399.68 2.91 0.02 0.08 0.01 2.81 0.3 1.62 4.54 0.0 1.27 0.05 1.45 0.01 0.04 0.01 0.14 0.03 0.1 0.03 0.21 0.01 0.0 0.01 0.0 0.0 0.01 0.0 0.0 0.0
0.35 0.24 3.54 0.73 1.49 11.92 2.08 251.0 286.31 668.04 318.86 0.83 225.49 1.78 72.26 0.78 1.24 4.49 594.49 2.35 0.27 0.09 0.03 2.35 0.61 1.27 6.89 0.11 0.48 0.07 1.92 0.02 0.02 0.01 0.23 0.0 0.21 0.06 0.25 0.0 0.0 0.0 0.05 0.07 0.02 0.0 0.0 0.01
0.39 2.23 3.6 0.39 1.81 7.65 1.45 203.69 307.71 1111.64 403.31 3.64 233.77 5.52 41.23 4.7 3.88 11.27 1041.33 8.05 0.45 3.85 3.42 7.64 1.27 6.77 11.88 1.59 1.95 0.22 5.87 1.14 1.26 1.56 2.92 1.39 1.33 1.42 2.05 0.09 0.0 5.13 0.72 0.46 1.72 0.0 0.0 0.39
AT1G72330 (ALAAT2)
 4.66 12.39 5.75 3.26 4.62 3.3 3.63 109.95 373.81 879.12 967.07 6.96 52.31 22.45 25.34 12.55 15.31 17.7 494.26 25.46 22.65 12.75 20.89 9.82 11.19 5.93 18.47 23.39 1.24 11.82 15.65 22.2 4.4 15.84 15.79 5.82 16.88 16.71 15.61 2.32 11.93 9.12 7.47 11.29 6.95 0.11 2.65 5.93
AT1G79860 (MEE64)
 0.06 0.09 0.91 0.26 0.56 3.57 0.54 66.32 79.85 124.59 77.51 0.82 4.7 0.52 24.22 0.08 0.08 0.3 103.39 0.81 0.0 0.03 0.0 0.56 0.06 0.38 1.46 0.06 0.13 0.0 0.34 2.3 0.65 0.5 0.02 0.0 0.08 0.02 0.08 0.0 0.0 18.41 4.12 0.02 2.76 0.0 0.0 0.14
1.26 7.35 5.81 1.77 4.07 13.88 3.76 316.41 756.38 1356.85 1174.94 4.86 353.25 9.87 29.32 5.36 2.23 6.42 1059.55 31.53 1.19 4.39 1.67 7.53 16.28 5.44 40.04 7.34 2.4 6.94 4.85 7.03 12.69 27.65 0.97 15.98 19.72 11.49 98.98 13.0 1.86 3.2 2.44 1.41 0.66 9.29 0.92 0.13
AT2G18470 (PERK4)
 0.18 0.47 2.57 0.76 13.18 89.65 10.91 172.36 235.61 460.47 338.22 0.86 75.97 5.58 32.49 0.29 0.4 2.75 322.98 2.92 0.19 0.54 1.56 2.94 0.38 1.72 4.51 0.0 0.14 0.06 1.4 0.26 0.28 0.05 1.18 13.87 0.39 1.38 0.24 0.0 0.0 0.31 0.05 0.0 0.16 0.0 0.0 0.09
0.29 0.87 1.72 1.81 6.35 16.06 4.9 31.14 42.21 41.7 41.51 0.25 5.33 1.01 7.1 0.46 0.19 0.33 46.12 0.89 0.38 1.2 1.48 0.54 0.22 0.43 0.32 1.17 0.42 0.19 0.45 1.03 0.34 0.21 0.6 0.46 0.88 0.48 0.34 0.95 0.0 0.16 0.3 1.36 0.3 0.0 0.01 0.43
AT2G33100 (CSLD1)
 6.77 0.28 5.08 1.28 4.5 3.74 1.69 65.62 101.96 319.02 140.66 1.35 19.79 1.76 13.25 0.21 0.32 1.72 248.87 2.0 0.05 0.08 0.08 2.13 0.23 1.18 2.74 0.33 0.41 0.09 1.07 0.05 0.04 0.02 0.19 0.33 0.95 0.07 0.3 5.47 0.01 0.15 0.1 0.58 0.18 0.91 0.37 0.14
48.34 0.38 2.17 0.4 1.27 4.44 1.15 79.91 220.02 366.92 303.43 2.99 47.12 2.25 25.96 0.17 0.32 1.48 252.38 2.49 0.05 0.05 0.15 2.44 0.18 1.25 3.24 0.03 3.84 0.03 1.15 0.0 0.01 0.03 0.09 0.12 1.88 0.12 0.18 0.0 0.0 0.07 0.0 0.01 0.01 0.0 0.0 0.0
0.73 1.12 17.78 17.4 21.51 37.09 26.95 100.11 144.63 229.92 219.25 16.22 22.39 0.95 31.51 0.23 0.31 1.03 171.17 1.62 0.0 0.19 0.12 1.47 0.6 0.7 2.06 0.08 2.29 0.29 1.05 2.95 1.17 8.06 0.08 1.09 1.48 0.44 7.43 0.31 1.11 22.21 8.54 0.11 9.55 0.12 0.0 0.7
0.47 0.81 3.53 0.89 4.15 12.55 2.27 268.97 883.43 1331.31 1469.27 4.93 321.22 5.02 16.46 0.97 1.57 14.61 1363.57 5.6 0.0 0.0 0.0 11.89 2.35 5.89 23.27 0.0 0.47 0.0 7.06 0.0 0.06 0.25 0.17 0.0 0.19 0.22 0.66 0.0 0.0 1.27 0.0 0.0 0.45 0.0 0.0 0.6
AT2G47030 (VGDH1)
 1.73 2.34 23.75 5.25 13.09 121.54 21.84 2140.86 1695.67 4472.61 2800.43 9.98 927.2 20.01 359.27 2.31 3.54 20.13 2894.8 21.96 0.85 0.52 0.03 20.67 3.42 12.62 40.36 0.0 0.3 0.27 11.74 0.07 0.04 0.0 0.61 0.04 1.11 0.32 2.61 0.0 0.0 0.38 0.01 0.0 0.03 0.0 0.0 0.0
0.1 0.22 1.83 0.19 0.96 5.21 0.34 101.99 228.11 331.5 259.73 0.77 5.62 0.45 65.28 0.19 0.28 1.55 257.34 1.35 0.05 0.03 0.13 1.21 0.22 0.61 3.23 0.17 0.11 0.0 1.0 0.11 0.05 0.03 0.19 0.34 0.3 0.23 0.11 0.0 0.0 0.06 0.16 0.35 0.03 0.0 0.0 0.06
0.37 0.24 10.64 7.29 5.32 6.18 7.92 84.06 254.59 333.28 336.53 5.3 127.82 2.17 24.66 0.28 0.4 2.3 300.02 2.44 0.0 0.08 0.0 3.08 25.3 1.95 4.56 0.45 2.72 39.85 1.37 0.84 0.32 1.2 0.09 0.02 0.35 0.12 0.32 0.0 0.0 1.52 1.92 9.19 1.44 0.0 78.58 1.43
0.9 1.13 9.42 0.95 4.13 27.53 3.19 640.73 1052.68 2205.67 1545.82 8.37 1079.13 9.92 103.64 1.34 2.29 9.86 1517.83 11.64 0.24 0.31 0.05 11.77 1.84 6.34 20.97 0.31 0.36 0.23 7.42 0.04 0.03 0.0 0.44 0.0 0.72 0.15 1.37 0.0 0.0 0.09 0.02 0.0 0.02 0.0 0.0 0.0
4.02 4.42 62.66 8.98 122.45 1558.85 107.34 5213.16 6036.46 9641.5 7803.89 33.76 3862.7 38.85 889.02 3.94 6.29 41.86 5708.17 41.74 1.05 0.97 0.11 40.41 8.16 23.79 86.8 0.02 1.01 0.81 25.16 0.18 0.09 0.0 1.14 0.04 1.96 0.48 4.41 0.02 0.0 0.86 0.17 0.0 0.07 0.0 1.11 0.0
0.1 0.16 1.36 0.18 0.56 4.07 0.25 86.82 114.68 299.57 194.69 0.83 81.2 1.24 16.72 0.32 0.47 1.4 208.89 1.68 0.06 0.03 0.0 1.71 0.24 1.07 2.71 0.01 0.17 0.02 0.96 0.01 0.0 0.02 0.08 0.02 0.09 0.02 0.16 0.0 0.0 0.0 0.0 0.0 0.04 0.0 0.0 0.0
1.29 5.14 4.25 0.35 2.45 11.51 1.6 334.05 440.31 1282.11 555.64 23.72 243.18 6.39 37.0 2.96 1.41 7.06 1112.26 9.89 1.04 2.77 3.82 7.41 2.45 5.08 11.23 3.84 5.51 1.28 9.38 3.32 2.03 1.11 4.05 2.58 7.93 2.45 7.74 0.31 0.34 1.11 0.8 3.78 2.15 0.0 0.64 1.23
AT3G20580 (COBL10)
 0.49 0.98 3.84 0.51 2.26 11.81 1.26 254.67 526.22 837.46 734.9 2.93 429.82 4.32 47.28 0.59 0.79 4.3 726.55 5.02 0.13 0.09 0.01 5.4 0.72 2.9 9.67 0.01 0.15 0.14 4.13 0.01 0.02 0.02 0.14 0.18 0.17 0.06 0.53 0.0 0.0 0.07 0.02 0.02 0.01 0.0 0.0 0.0
AT3G21180 (ACA9)
 0.38 0.33 4.39 11.74 24.16 82.5 34.19 195.78 260.33 338.85 274.62 2.08 147.93 2.59 56.98 0.21 2.41 2.03 307.62 2.68 0.07 0.05 0.01 2.13 0.28 1.16 3.96 0.0 0.05 0.11 1.3 4.68 0.45 1.25 0.05 0.01 0.08 0.03 0.19 0.03 0.0 30.75 16.66 0.08 19.38 0.0 0.0 1.96
0.22 0.74 6.61 0.87 4.48 22.7 1.63 456.15 1034.69 1037.95 1082.65 3.64 24.68 3.55 110.65 1.04 1.11 8.11 862.56 3.32 0.15 0.0 0.0 4.59 1.26 3.17 15.34 0.0 0.0 0.11 3.86 0.0 0.0 0.0 0.2 0.0 0.19 0.07 0.57 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
98.69 14.23 25.62 19.79 29.96 75.6 22.95 738.66 998.35 2871.85 2322.81 39.64 208.48 52.29 26.04 124.46 27.01 34.53 1926.03 27.35 9.88 27.89 20.99 109.44 118.4 128.28 105.32 16.93 23.26 18.49 19.2 31.69 15.41 38.56 6.01 85.23 133.05 57.18 162.46 2.58 1.08 73.31 44.45 23.59 8.89 65.74 23.61 8.91
7.32 0.95 8.37 3.38 4.22 5.1 3.03 60.67 74.62 107.51 68.38 1.66 17.45 0.98 23.44 0.45 2.55 5.01 85.04 1.55 4.76 1.53 0.76 1.09 0.14 0.61 1.2 0.55 1.03 0.07 1.08 1.24 2.01 10.6 0.34 6.91 0.16 0.93 0.61 0.75 2.89 6.04 17.27 0.88 5.0 26.04 0.0 1.88
AT3G25165 (RALFL25)
 2.87 2.58 17.21 1.99 12.49 79.34 7.28 1409.77 3100.25 5793.24 4689.15 13.32 22.02 21.04 1774.62 5.35 6.11 42.27 5181.38 28.57 0.52 0.5 0.0 41.36 12.02 19.42 70.95 0.0 0.49 0.19 23.38 0.0 0.0 0.0 0.84 0.0 0.6 0.51 2.92 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
0.36 0.73 9.54 0.43 4.04 17.68 1.38 499.15 24.89 1449.38 28.06 4.34 0.38 6.65 73.15 0.9 1.35 9.47 1391.73 9.31 0.14 0.19 0.02 9.34 3.06 4.52 25.65 0.04 0.2 0.05 4.69 0.01 0.02 0.0 0.24 0.06 0.23 0.06 0.86 0.0 0.0 0.0 0.0 0.0 0.01 0.0 0.0 0.0
AT3G52600 (CWINV2)
 0.06 0.36 4.97 0.13 2.16 13.57 1.5 391.06 198.77 842.63 174.03 0.54 8.7 2.86 113.37 0.45 0.53 3.91 618.26 3.59 0.07 0.01 0.0 3.21 0.82 1.58 9.98 0.01 0.25 0.06 2.53 0.0 0.0 0.05 0.11 0.03 0.19 0.05 0.34 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
28.07 8.47 2.92 5.49 5.47 14.55 8.4 81.37 149.98 222.2 240.15 0.45 11.74 8.46 18.22 5.7 6.75 8.83 186.65 8.11 9.49 6.62 7.55 6.72 1.85 7.17 14.66 4.17 13.77 0.84 6.77 5.62 6.83 7.48 4.84 9.19 6.73 7.29 13.87 8.43 48.52 11.51 11.42 6.76 11.06 26.47 12.86 5.53
0.07 0.28 2.35 0.3 1.65 7.45 0.56 178.04 158.71 542.49 170.99 1.47 6.75 1.28 41.14 0.47 0.66 2.94 438.24 2.46 0.04 0.21 0.07 2.37 0.42 1.49 5.49 0.08 1.11 0.14 1.86 0.02 0.04 0.04 0.13 0.24 0.14 0.12 0.22 0.03 0.0 0.0 0.06 0.0 0.06 0.0 0.02 0.01
0.02 0.08 3.24 2.12 1.71 7.29 2.0 34.05 84.66 103.59 77.83 0.55 26.94 0.66 20.54 0.07 0.18 0.72 88.06 0.66 0.04 0.04 0.01 0.63 0.12 0.41 1.11 0.0 0.07 0.0 0.34 0.27 0.02 0.0 0.02 0.0 0.02 0.01 0.04 0.05 0.0 0.37 0.05 0.0 0.21 0.0 0.0 0.0
0.0 0.3 1.71 0.0 1.83 1.57 0.0 38.08 15.38 284.81 29.87 1.16 3.59 0.76 6.13 0.27 0.31 1.27 306.95 0.79 0.0 0.33 0.0 2.86 0.78 1.84 5.39 0.35 0.2 0.0 1.51 0.0 0.0 0.0 0.04 0.0 0.0 0.0 0.09 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
0.08 0.98 2.64 1.51 1.67 6.43 2.6 185.77 530.96 761.48 797.89 115.85 273.19 3.27 28.12 0.43 0.53 4.43 592.44 4.17 0.13 0.05 0.08 4.29 3.11 2.3 7.84 0.71 0.28 2.99 3.42 0.79 0.27 1.02 0.34 0.34 1.25 0.17 0.93 0.0 0.0 0.66 0.13 0.17 0.06 0.88 0.0 0.11
AT4G38190 (CSLD4)
 1.86 0.13 1.75 4.17 6.5 21.31 11.99 103.27 139.1 203.77 143.94 0.74 37.73 0.84 16.46 0.12 0.26 1.13 174.23 1.17 0.02 0.04 0.01 1.18 0.1 0.6 1.62 0.0 1.02 0.0 0.6 0.01 0.0 0.0 0.04 0.01 0.08 0.01 0.08 0.16 0.0 0.0 0.01 0.0 0.01 0.0 0.0 0.0
0.27 1.83 3.7 1.44 2.93 19.94 3.38 268.8 360.67 778.38 501.54 1.83 276.31 4.92 89.68 0.68 1.03 5.2 641.62 5.78 0.49 0.81 0.79 4.73 0.85 2.95 9.2 0.34 0.68 0.25 4.07 0.11 0.31 0.22 0.55 0.61 0.58 0.5 0.86 0.21 0.12 0.3 0.22 0.53 0.09 0.0 0.0 0.25
9.21 10.58 7.13 4.33 5.63 15.6 6.26 161.84 300.14 373.0 442.03 49.69 98.96 18.42 36.88 20.66 48.74 44.83 400.91 16.02 11.76 5.3 5.35 16.59 3.79 13.52 39.48 6.6 0.99 0.19 7.59 16.91 8.3 21.85 1.96 22.8 22.45 8.22 21.81 0.33 0.0 135.8 46.08 1.94 52.84 0.0 13.25 6.83
0.2 0.5 2.33 0.56 1.4 6.35 1.15 118.3 226.12 523.96 337.68 56.21 107.36 4.39 62.32 0.56 0.71 3.2 412.71 5.76 0.12 0.04 0.04 4.84 0.49 2.59 7.85 0.0 0.45 0.04 1.69 0.01 0.01 0.0 0.11 0.03 0.21 0.04 0.47 0.02 0.0 0.02 0.0 0.0 0.01 0.0 0.0 0.0
4.22 11.32 51.04 13.94 216.46 1368.27 153.81 3541.18 1941.85 6059.39 1568.58 19.04 1654.24 25.56 447.46 5.49 4.36 33.1 5252.64 33.86 1.01 1.79 0.23 30.38 5.44 17.09 61.33 0.04 1.2 0.55 27.43 0.4 3.11 0.49 1.04 0.64 1.21 1.35 6.79 0.57 2.51 0.3 0.0 0.0 0.08 0.0 0.0 0.01
AT5G23270 (STP11)
 0.18 0.59 3.2 0.48 1.81 4.93 0.88 102.0 334.96 829.44 603.26 3.76 10.28 4.54 24.15 0.51 0.8 4.89 614.54 6.13 0.03 0.03 0.06 5.52 0.92 3.64 7.83 0.03 0.18 0.13 2.88 0.21 0.15 0.04 0.12 0.07 0.26 0.11 0.5 0.0 0.0 0.15 0.06 0.0 0.18 0.0 0.0 0.0
0.04 0.29 1.83 0.05 1.42 10.31 0.74 199.11 138.47 541.26 128.97 1.63 0.62 2.1 63.42 0.48 0.51 2.53 597.78 3.27 0.07 0.04 0.01 3.12 0.5 1.47 6.86 0.0 0.09 0.06 1.75 0.0 0.01 0.0 0.11 0.01 0.08 0.03 0.27 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
0.39 0.52 16.23 2.35 11.46 33.12 1.07 612.55 1140.08 2092.43 1661.88 20.58 350.89 7.53 75.4 0.56 2.72 13.67 1348.88 5.6 0.0 0.39 0.0 13.85 4.42 5.67 23.52 0.0 0.0 0.43 6.81 0.0 0.0 0.0 0.22 0.0 0.41 0.06 0.56 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
0.63 1.18 10.88 0.4 6.76 54.45 2.18 953.63 546.73 2324.15 610.63 4.31 848.81 9.71 189.45 1.8 2.48 12.64 1644.49 15.86 0.49 0.17 0.04 11.62 2.64 7.22 32.04 0.0 0.51 0.33 8.1 0.06 0.01 0.0 0.49 0.02 0.56 0.17 1.56 0.0 0.0 0.0 0.0 0.0 0.02 0.0 0.0 0.0
3.05 8.51 4.7 4.25 4.01 10.23 4.63 112.12 214.47 303.26 262.83 25.18 30.44 13.36 29.16 7.83 13.8 9.32 285.33 10.31 9.68 5.55 5.64 9.91 2.03 9.07 20.53 3.83 6.79 0.5 7.16 7.03 3.95 6.96 3.98 5.61 6.63 5.83 6.53 5.89 48.05 30.4 23.62 9.7 12.38 1.18 0.08 7.4
AT5G58050 (SVL4)
 2.37 3.94 2.7 0.43 1.96 15.8 1.66 228.23 207.12 558.29 205.32 1.04 192.87 2.91 19.24 0.45 0.52 2.64 412.94 4.82 0.64 0.57 0.37 2.66 0.6 1.44 5.52 0.39 0.71 0.01 3.27 0.02 0.04 0.01 0.11 0.1 0.06 0.09 0.33 2.17 0.01 0.07 0.02 0.0 0.01 0.09 0.0 0.0

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)