Heatmap: Cluster_136 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Archegonia (mature)
Antheridia (9 DAI)
Antheridia (small, 11 DAI)
Antheridia (mature, 14-15 DAI)
Antheridia (japan)
Antheridia
Antheridia Reute
Antheridia Gransden
Sperm cell packages
Gametophore
Gametophore (dehydrated)
Gametophore (rehydrated)
Gametophore (hydroponic)
Gametophore+auxin (hydroponic)
Leaflets
Paraphysis
Sporophyte (9 DAF)
Sporophyte (16 DAF)
Sporophyte S1
Sporophyte S2
Sporophyte S3
Sporophyte S4
Sporophyte (10 DPC)
Spore capsule (green)
Spore capsule (green, reute)
Spore capsule (mature)
Spore capsule (mature, reute)
Spores (germinating, continous light)
Protoplast
Protonema
Protonema (liquid culture)
Protonema+aba
Protonema+gametophore
Protonema+gametophore (continous light)
Protonema+gametophore (heat stress)
Protonema+gametophore (high light)
Protonema+gametophore (low light)
Protonema+gametophore+acetone
Protonema+gametophore+gib.acid (continous light)
Protonema+gametophore+glucose (blue light)
Protonema+gametophore+glucose (darkness)
Protonema+gametophore+glucose (far red light)
Protonema+gametophore+glucose (red light)
Protonema+gametophore+glucose (uv-b light)
Protonema+gametophore+jasmonate
Protonema+gametophore+stringolactone
Protonema+glucose (continous light)
Chloronema
- 2.72 3.46 -0.06 -1.18 0.46 1.72 1.51 1.01 -3.72 -2.4 -1.75 -3.69 - -3.3 -3.07 0.59 1.36 0.05 0.04 -0.86 -0.06 2.06 2.46 -1.38 -1.51 -4.16 -5.51 - -5.15 -5.65 -5.96 -6.69 - -5.96 -3.43 -5.74 -5.25 - -5.88 - - -3.07 - -5.69 -5.78 - -6.31
-5.15 1.34 2.31 1.26 2.25 2.8 2.53 2.98 2.26 - - - - - -7.76 -3.78 -1.68 -0.61 - -5.43 - - - 2.61 -0.75 -2.86 - - -5.7 - - - - - - - - - - - - - - - - - - -6.38
- 1.48 3.32 1.35 3.43 2.66 1.84 1.65 1.07 - - - -3.8 -4.42 -8.08 -0.17 -3.41 - - - - - - 2.36 -1.09 -3.69 - - - - - - - - - - - - - - - - - - - - - -
-1.12 1.35 3.44 0.62 2.83 3.05 2.5 2.44 0.2 - - - -6.06 - -8.87 -0.91 -6.5 -6.22 - - - - - 2.12 -3.89 -5.96 - - - - - - - - - - - - - - - - - - - - - -
- 2.73 4.36 0.86 1.39 1.09 0.21 0.22 0.95 - -2.48 -3.26 - - - -0.45 -4.44 - -2.29 -4.29 -1.24 -3.25 - -3.12 -1.08 -2.23 - -4.27 -1.88 -0.0 -4.27 -2.24 -0.96 -1.53 - - - -0.63 -0.12 -2.24 - - -1.45 -2.93 0.09 0.02 -1.13 -3.58
- 2.21 4.25 -0.77 1.95 - - 0.71 - - 1.32 - - - - - -0.75 - - - 2.55 - - - - 0.6 - - - -0.43 - - 0.97 - - - - - 1.08 - - - - - 0.39 - 0.36 -1.29
-0.98 1.45 2.48 1.54 1.04 1.58 1.74 1.97 -0.31 0.03 -2.21 -2.05 -0.71 -1.86 -0.95 -0.51 -0.19 0.41 -0.41 0.01 0.01 0.3 -2.64 0.31 0.24 -0.04 0.52 -1.45 -1.21 -1.43 -1.2 -0.31 -1.76 -1.1 -1.27 -1.33 -1.38 -0.27 -2.61 -1.74 -2.86 -2.78 -2.02 -1.26 -2.27 -0.12 -1.48 -1.72
- - 3.91 - 1.4 - - - - - - - - - -1.62 3.1 4.01 - - - - - - - - 2.4 - - - - - - - - - - - - - - - - - - - - - -
- - 3.93 3.77 - - - - - - - - - - - - - - - - - - - - - 4.22 - - - -0.94 - - - - - - - - - - - - - - - - - -
- - 3.69 2.83 - - - - - - 3.3 - - - - - - - - - - - - - - 4.18 - - - - - - - - - - - - - - - - - - - - - -
- 0.67 2.78 -1.75 -3.56 -1.83 - 0.45 - -1.2 0.48 1.05 -2.91 0.16 -1.28 - 2.6 0.57 - 0.61 -0.56 -0.49 - 0.36 -2.38 1.97 -2.42 0.47 -0.81 -1.04 -1.65 -1.62 -3.29 -1.23 2.99 -2.39 - -0.81 -1.65 -1.72 -1.54 0.05 -2.09 - - -2.11 0.05 -3.25
0.95 1.78 2.61 0.32 2.04 1.35 0.86 0.81 -0.77 -0.9 -2.89 -2.28 -2.03 -2.24 -1.41 0.78 0.41 0.92 0.72 0.1 -0.47 0.0 -0.7 0.1 -1.24 -0.94 -3.46 -0.58 -1.61 -1.14 -1.19 -0.58 -1.18 -1.23 -3.15 -1.41 -0.51 -0.2 -2.15 -0.99 -0.72 -1.07 -1.72 -0.37 -2.42 -0.21 -1.16 -0.32
1.5 2.67 -0.27 - - - - - - - - - - 0.61 2.63 2.54 3.91 1.32 - - - - - - - 1.95 - - - -1.92 - - - - - - - 1.51 - - - - - - - - - -
0.73 2.05 2.54 0.83 1.85 1.44 1.33 2.04 2.0 -2.91 - - -2.81 -6.46 -2.54 - -0.24 1.24 -1.99 -0.8 -0.78 -0.32 -2.42 2.7 -1.33 -2.22 -4.49 -1.61 -3.96 -2.5 -2.51 -5.81 -3.65 -4.66 -3.94 -3.11 -4.69 -2.08 -4.93 -3.36 -0.24 -0.76 -2.13 -3.67 -4.45 -1.35 -2.9 -0.65
- 2.51 3.6 -0.98 3.17 2.9 2.42 2.56 -0.05 -9.07 -5.27 -5.88 - - -8.82 -0.63 -4.48 -3.87 -6.65 -7.65 - -4.96 - -7.65 -4.8 -4.07 -8.18 - -4.14 -9.58 - -7.08 - - - - - -7.37 - - - - - - - - - -8.17
- 2.6 3.12 2.63 -3.13 3.33 3.71 0.88 - - - - - - -5.72 - -1.7 -0.63 - - - - - - -1.17 -2.15 - - - - -3.18 - - - - - - - - - - - - - - -2.16 - -
- - 4.6 - - 3.07 2.53 3.26 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - 4.36 - - - - - - - - - - - - - 4.78 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - 3.87 - - - - - - - - - - - - 5.06 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - 3.97 2.36 - - - - - - - - - - -1.14 - - 4.15 - 2.88 - - - - - 0.7 - - - - - - - - - - - - - - - - - - - - - -
-0.45 -1.21 2.53 0.26 2.29 2.69 2.03 2.71 -1.43 - - - -4.27 - -6.01 -1.19 -0.22 -3.16 1.29 2.39 1.33 0.12 -1.31 -3.14 1.57 -1.11 -4.88 - -1.27 -4.77 -5.34 - - -3.81 - - - -5.17 - -4.27 -3.1 - - - -5.07 - -4.97 -6.2
- - 0.9 0.28 1.71 3.48 2.07 2.24 0.37 - -3.43 - -2.52 -3.29 -6.11 - -0.74 - 0.83 2.59 1.19 -0.64 - - 1.64 0.19 -3.25 - 1.88 -3.43 - - - -2.65 -3.6 - - - - - -2.92 - - - - - - -5.02
- - - - 2.93 2.93 - - -2.0 - - - -2.09 0.97 2.25 2.55 - -0.39 - - 1.14 - - - - - - - 2.18 1.02 - - - - - - - - - 3.29 - - - - - - - -1.38
- - 3.04 2.18 1.59 - - - 1.31 - - 0.54 - - -4.2 - 3.1 -0.21 3.15 -0.42 - - - 1.09 - - -0.33 - - -1.91 - - - - - - - - -0.65 -0.69 - - - - - -1.4 -1.1 1.98
-3.0 2.01 3.46 1.41 0.32 1.81 2.16 2.65 0.47 -2.67 -2.91 -3.23 -3.24 -4.18 -3.35 -1.63 -2.35 2.21 -2.92 -1.27 -2.67 -1.71 -6.65 0.34 0.26 0.24 0.08 -2.93 -5.45 -4.14 -5.26 -0.75 -4.7 -4.9 -5.95 -4.03 -6.39 -2.25 - -3.34 - -4.9 -5.4 -3.06 -5.85 -2.53 -4.42 -3.68
- - - 1.54 - - 3.34 1.23 - 0.3 - - - - 1.06 3.08 1.78 0.59 - 0.25 - - - - - 0.09 0.72 -0.6 - -0.06 0.14 0.6 - 0.12 - -6.52 -0.64 - 1.67 - 0.63 - -0.14 - - -2.2 - -2.63
-1.64 2.82 3.56 -0.89 1.99 2.35 3.14 3.1 -0.17 -7.38 - - - - -7.06 -0.98 -4.92 -3.71 - - - - -4.18 -4.19 - -3.81 -6.04 -4.96 - -7.55 - - - - - - - - -5.27 -6.31 - - -5.79 - - - - -7.84
-0.86 2.73 3.26 1.74 2.12 2.56 2.21 1.73 -1.47 -6.24 - - -5.29 - -5.33 - -2.22 0.83 -3.02 -0.21 1.34 1.2 -2.52 -0.08 -4.29 -2.21 - - -7.13 -10.49 - - - - - - - -6.89 - -6.57 - - -6.58 - - - - -
-2.34 1.81 3.62 1.01 1.93 2.07 2.92 2.8 1.22 -7.73 - - -8.51 - -8.36 -7.56 -2.9 0.94 -2.28 -2.07 -2.44 0.06 - -0.05 -1.43 -3.6 - - - -11.37 -8.68 - - - - - - -8.2 - - - - - - - - - -
-0.7 3.04 3.5 2.09 2.8 1.35 0.53 1.39 -0.48 -2.32 -3.18 -3.42 -2.36 -3.51 -2.32 -1.67 -2.73 0.59 -2.6 -2.18 -2.55 0.69 -1.65 -4.25 -2.57 -3.36 -4.06 -3.38 -1.83 -2.8 -1.88 -2.64 -2.23 -3.09 -2.57 -1.97 -1.78 -1.23 -4.14 -3.77 -4.37 -4.95 -4.33 -3.31 -4.7 -1.3 -3.39 -1.97
- 2.04 3.05 1.27 2.99 2.93 1.88 2.37 0.32 -4.31 - - -4.05 -7.07 -5.46 -1.55 -0.83 -0.23 0.38 -0.08 -0.04 0.02 -2.34 -0.65 -1.66 -2.63 -6.63 -6.82 - -8.92 - - -7.66 -7.01 - - - -6.82 - -6.12 - - - -6.12 - -4.64 - -
- - 2.15 - 0.65 - - 1.9 2.63 1.06 - - - - 2.43 - 1.84 - - - - - - - - 3.91 - - - -1.35 - - 0.81 - - - - - - - - - - - - - 1.93 -
-1.42 1.06 4.56 2.39 0.91 1.82 1.56 1.81 0.78 -4.99 - - -5.19 -5.92 -5.79 -0.86 -3.26 -2.0 -2.67 -2.81 -2.82 -3.39 -1.82 -1.12 -2.41 -4.13 -4.03 -4.33 -5.57 -5.02 -3.97 -5.49 -5.16 -5.06 -7.02 -4.84 -4.54 -4.71 -5.78 -5.6 -5.55 -6.36 -5.56 -7.14 -6.03 -4.91 -5.24 -5.5
- 2.67 3.56 - - 2.47 2.7 - - - - - - - - - - - - - 1.82 2.61 3.03 - - - - - - - - - - - - - - - - - - - - - - - - -
-1.09 2.77 3.31 -0.67 2.31 2.59 2.36 2.09 1.0 -7.34 -7.95 - - - -7.83 -3.12 -0.72 -0.16 -1.13 -2.6 -3.87 -0.94 -3.54 2.1 -1.63 -3.13 -6.61 -6.81 -5.89 -9.15 - - -7.78 - - - - -6.44 - -6.58 - -7.92 -6.62 -4.69 -6.87 -6.83 -6.3 -6.91
- - 3.85 - - - - - - - - - - - - - 3.67 -0.47 - - - - - 1.35 - 4.14 - - - - - - - - - - - - - - - - - - - - - -
2.25 2.09 3.62 0.33 -0.34 1.97 2.69 1.52 1.6 -2.97 - - -2.75 -2.58 -4.75 - -0.57 1.82 -1.77 -1.19 - -3.51 - -0.21 - -1.11 - -3.75 -4.44 -3.39 -4.5 -2.12 -4.57 -2.54 - - -3.33 -4.02 - -3.15 - -3.69 -4.02 - -3.92 -3.05 -2.67 -3.51
- - 2.82 - 2.87 - 2.5 - - - - - - - - - 1.39 - 3.54 1.85 - 1.41 2.32 - - 1.3 - - - - - - - - - - - - - - - - - - - - - -
- - 4.15 - - - - - - - 2.75 - - - 1.03 - - 2.63 - - - - - - - 3.94 - - - - - - - - - - - - - - - - - - - - - -
-0.89 2.38 2.43 -1.02 2.65 3.1 2.29 2.45 -0.22 - - - -4.49 - -5.91 -3.54 -0.58 -4.16 1.33 0.93 0.78 -0.19 -3.14 - -0.83 -4.16 - - -2.87 -2.12 -4.59 - -5.08 - - - - - - - -3.67 -0.88 -4.18 - -1.56 -2.42 -3.98 -
- - 3.81 3.76 - - - - - - - - - - - - 3.74 - - - - - - - - 2.83 - - - - - - - - - - - - - - - - - - - - - -
- - 4.21 - - - - - - - - - - - - - 3.71 - - - - - - - - 4.03 - - - - - - - - - - - - - - - - - - - - - -
- 3.03 - - - - - - - 1.75 - - - 0.17 1.62 - -0.41 0.59 - - - - - - - -0.4 - -0.14 - -0.18 0.87 - -0.3 - - - -0.37 1.68 0.53 1.68 - - 0.81 1.68 1.67 1.15 2.42 -0.9
- - 4.03 - - - - - - - - - - - - - 4.99 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - 2.97 - - 4.2 - - - - - - - - - - 3.44 - - - - - - - - 3.45 - - - - - - - - - - - - - - - - - - - - - -
-3.68 3.03 3.73 -1.08 3.51 1.48 1.26 1.25 -1.08 -4.35 -7.34 -7.52 -5.19 -8.13 -4.46 -2.29 -1.25 -1.79 -0.27 -0.59 -0.81 -0.04 -1.69 0.9 -2.98 -8.19 -8.66 -5.4 -8.63 -7.9 -6.66 -9.2 -8.2 -8.29 -9.88 -8.47 -8.7 -5.35 -8.31 -6.63 -10.76 -7.52 -4.87 -6.27 -8.35 -5.54 -6.28 -9.2
- 1.51 3.49 2.13 -0.77 3.35 2.96 2.09 - - - - - - - - - 0.5 - - - - - - - 1.28 - - - - - - - - - -0.74 - - - - 0.33 - - - - -0.76 - -1.42
- 2.66 3.54 -1.27 2.69 2.74 1.83 2.79 - - - -5.72 -6.71 - -7.22 1.2 -3.59 0.81 -4.14 -6.13 -6.05 0.17 -3.85 -2.33 -2.36 -3.06 - - - -8.54 - - - - - - -6.35 - - - - -6.23 - - - - - -
- - 3.79 - 1.79 - - - - - - - - - -1.78 - 4.01 1.23 - - - - - - - 3.56 - - - -2.18 - - - - - - - - - - - - - - - - - -
- 1.08 - 0.51 -0.31 - 1.88 - - - - - - - 0.23 2.88 1.13 1.41 - 2.23 - - - - - 3.37 - - - 0.32 - - 0.78 - - 1.24 - 0.86 - 0.57 - - - - 0.42 0.67 - -
- - 3.09 2.86 1.04 - - - 1.91 - - - - - 0.74 - - 1.43 - 2.57 - - - 3.13 - 2.02 - - 1.59 -1.82 - - - - - - - - - - - - - - - - - -
-3.31 1.23 3.01 -0.2 2.34 1.75 1.69 1.39 -2.47 -0.72 -0.88 -1.72 -2.12 -2.58 -2.1 -1.66 -0.64 0.58 1.46 0.14 -0.73 0.13 -0.15 -1.96 0.23 -1.07 0.11 -1.28 -1.31 -1.85 -0.99 -0.22 -1.61 -1.67 -1.85 -1.21 -1.39 -0.66 -2.94 -1.39 -3.0 -2.46 -2.11 -0.98 -3.01 -0.94 -0.21 -1.63
-0.54 2.09 2.58 -0.82 2.73 2.02 1.33 1.33 -0.99 -0.48 -4.51 -4.63 -1.13 -1.95 -0.51 -2.34 -0.42 -1.47 0.26 0.35 0.23 0.14 -1.35 -3.42 -1.34 -1.13 -2.26 -0.13 -1.94 -1.09 -0.6 -0.93 -0.94 -0.78 -2.54 -0.45 -0.07 -0.5 -1.6 -1.5 -2.62 -2.53 -1.21 -1.34 -1.37 -0.67 -0.66 -1.07
-0.38 1.4 1.97 1.12 -0.57 2.27 2.31 2.36 - -0.33 -4.27 -3.65 -0.91 -2.54 -0.04 - -0.19 0.62 1.83 0.5 0.17 0.19 -0.22 -1.34 -0.06 -0.64 0.29 -0.21 -1.79 -2.06 -1.31 -1.24 -2.29 -1.42 -4.01 -2.15 -2.32 -0.41 -3.15 -2.52 -1.52 -2.54 -2.05 -1.69 -2.84 -1.2 -1.79 -1.67
-2.1 2.54 3.32 1.09 1.66 2.14 1.83 2.51 -0.99 -1.83 -3.79 -4.81 -2.63 -3.15 -3.03 -0.63 -3.16 -2.1 -5.02 -3.35 -4.75 -3.68 -3.63 -1.55 -3.8 -2.44 -1.36 -1.17 -4.15 -1.36 0.09 -3.27 -1.37 -1.29 -1.52 -1.69 -0.97 0.96 -2.89 -1.99 -2.73 -3.26 -2.93 -3.13 -2.34 0.85 -2.71 -1.33
- 1.8 1.86 0.25 2.34 2.41 1.49 1.89 0.85 -3.18 - -4.16 - -5.19 -2.85 -2.84 0.19 -1.22 2.25 2.87 0.94 1.31 -1.05 -0.04 -0.75 -2.26 - - - -7.55 - -5.5 - - - - - -3.51 - - - - -3.98 -4.76 - - - -5.5
-0.37 0.59 2.48 1.04 1.97 2.27 2.66 2.08 1.62 -3.11 -1.46 -2.1 -3.41 -5.52 -2.92 -2.66 -1.76 0.95 -3.85 -1.37 -1.91 -2.26 -3.56 2.98 -0.7 0.25 -2.24 -4.69 -3.33 -2.92 -3.46 -3.36 -4.31 -3.97 -4.53 - -3.7 -4.81 -3.84 -3.3 -4.6 -4.22 -4.87 -5.38 -4.75 -3.57 -2.6 -3.69
-2.53 3.0 3.78 -0.19 2.62 2.72 2.25 2.25 0.47 -6.7 -6.01 -6.99 -5.85 -4.02 -6.91 -0.81 -4.58 -6.42 -6.12 -5.45 -4.98 -6.25 -5.83 - -7.37 -8.92 -9.82 -5.33 -6.44 -5.42 -4.7 -6.15 -5.43 -4.5 -7.42 -6.48 -5.72 -3.6 -5.68 -4.51 -6.15 -4.58 -4.87 -5.52 -3.71 -3.64 -5.43 -5.51
- - 1.42 1.85 1.02 - - - - - - - - - 1.08 - 3.48 - - - - - - - - 3.84 - - - 0.71 1.0 1.98 1.71 - - - - - - - - - - - - - - 0.31
0.66 1.94 2.57 0.73 1.8 1.88 2.18 2.1 0.7 -3.45 - - -4.64 -5.04 -3.49 1.27 0.18 0.51 0.68 0.64 0.23 0.52 0.38 1.16 -0.19 -0.8 -0.56 - -6.33 -5.05 -4.52 -5.01 -5.81 - - - -5.06 -4.82 - - -3.82 -2.73 -3.61 -3.36 - -4.43 -5.72 -3.73
-1.38 1.04 1.81 -0.47 0.55 1.23 1.34 1.68 -1.01 0.05 0.26 0.14 -0.22 -1.6 -0.21 -1.93 0.84 -0.32 -0.32 -0.11 -0.55 -0.46 -2.66 -2.64 -0.08 -0.05 -0.01 0.07 0.49 -0.21 0.05 0.15 -0.37 -0.38 -0.12 -0.65 0.19 -0.37 -1.51 -0.75 -1.08 -1.16 -0.63 -0.64 -1.08 -0.29 -0.45 0.06
-0.1 0.78 1.45 -0.61 0.99 0.19 0.74 0.69 0.4 -0.01 0.13 0.05 -0.34 -1.34 -0.14 0.03 0.05 -0.15 0.1 -0.21 -0.09 -0.17 -1.88 -0.75 0.45 -0.01 0.34 0.25 0.86 -0.1 0.15 -0.18 -0.36 -0.18 -0.04 0.38 0.0 -0.37 -1.13 -0.7 -1.12 -1.12 -0.66 -0.62 -1.03 -0.41 -0.25 -0.33
-0.44 1.14 4.41 0.05 1.67 2.09 2.67 2.32 - -2.81 - - 0.29 0.71 -7.58 - -2.9 - - - - - - - -0.62 - -4.64 - - -7.54 -4.38 - - - - - -4.32 - - - - - - - - -4.39 - -
- 2.45 2.78 2.35 -0.7 1.39 1.38 2.3 0.26 -4.13 - -1.76 -2.62 - -3.09 3.03 1.81 1.33 - -3.26 -2.18 - - -0.4 -2.53 1.27 - - - -6.93 - - - - - - - - - - - -3.17 - - - - - -5.15
- 2.02 2.25 -0.47 3.08 2.92 2.46 2.53 - -2.51 - - -4.21 - -2.56 - -1.3 1.32 - -2.35 -1.5 -1.91 - 2.32 -0.57 -1.29 - - -4.04 -4.04 -3.15 - - -4.68 -2.9 -2.11 - - -4.68 - - - - -3.59 -5.06 -3.63 -3.85 -
- - 4.85 - - - - - 4.27 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - 4.03 - 1.53 - - - - - - - - - - - 4.44 - - - - - - - - 2.82 - - - - - - - - - - - - - - - - - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.