Heatmap: Cluster_197 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Archegonia (mature)
Antheridia (9 DAI)
Antheridia (small, 11 DAI)
Antheridia (mature, 14-15 DAI)
Antheridia (japan)
Antheridia
Antheridia Reute
Antheridia Gransden
Sperm cell packages
Gametophore
Gametophore (dehydrated)
Gametophore (rehydrated)
Gametophore (hydroponic)
Gametophore+auxin (hydroponic)
Leaflets
Paraphysis
Sporophyte (9 DAF)
Sporophyte (16 DAF)
Sporophyte S1
Sporophyte S2
Sporophyte S3
Sporophyte S4
Sporophyte (10 DPC)
Spore capsule (green)
Spore capsule (green, reute)
Spore capsule (mature)
Spore capsule (mature, reute)
Spores (germinating, continous light)
Protoplast
Protonema
Protonema (liquid culture)
Protonema+aba
Protonema+gametophore
Protonema+gametophore (continous light)
Protonema+gametophore (heat stress)
Protonema+gametophore (high light)
Protonema+gametophore (low light)
Protonema+gametophore+acetone
Protonema+gametophore+gib.acid (continous light)
Protonema+gametophore+glucose (blue light)
Protonema+gametophore+glucose (darkness)
Protonema+gametophore+glucose (far red light)
Protonema+gametophore+glucose (red light)
Protonema+gametophore+glucose (uv-b light)
Protonema+gametophore+jasmonate
Protonema+gametophore+stringolactone
Protonema+glucose (continous light)
Chloronema
- 2.99 -2.19 -1.93 -1.58 - - - 4.0 -0.03 - -2.76 -0.32 0.5 -4.25 - 1.83 -2.45 - - - -2.48 - - -1.4 2.48 -2.88 - - -2.18 -1.83 -1.7 - - - - - 1.64 - - 0.71 0.7 -2.61 - - 1.31 - -
- - -0.5 0.52 2.05 0.85 - - 2.92 -1.38 - - - - -3.93 4.55 0.35 - - - - - - 1.67 0.39 1.43 - - - - - - - - - - - - - - - - - - - - - -
1.74 3.19 2.15 - -0.81 - 0.79 0.51 3.71 -1.49 0.64 - -2.07 - -3.8 -1.04 1.34 0.86 - - - - - -1.5 - 1.75 - - - -4.82 0.41 -0.78 - - - - - -0.76 - - - - -1.25 -2.04 - -1.75 - -
- 4.59 0.47 -2.44 - -0.3 - - 3.94 - - - - - - - 1.95 - - - - - - -2.03 - -0.07 - -2.01 - - - -2.31 - - - - -2.01 - - -1.78 - - - - - -2.31 - -
- 4.35 -0.05 -1.12 -1.07 - - - 3.56 - -1.79 -1.1 -1.57 - -3.31 - 1.39 3.13 - - -1.4 - - -2.26 -2.22 -0.93 - - - - - - - - - - - - - - - - - - - - - -
- 3.67 1.17 - -1.8 - - 1.63 4.06 - - - - - - - 2.0 1.05 - - - - - -0.25 - 2.6 - - - - - - - - - - - - - - - - - - - - - -
- 3.67 1.17 - -1.8 - - 1.63 4.06 - - - - - - - 2.0 1.05 - - - - - -0.25 - 2.6 - - - - - - - - - - - - - - - - - - - - - -
- 4.79 - - - - - - 3.22 - - - - - - - 2.01 - - - - - - 0.43 - 2.49 - - - - - - - - - - - - - - - - - - - - - -
-0.1 2.74 - - 0.23 - - - 3.52 - - - - - - 4.41 0.81 -1.68 - - - - - 0.02 -0.81 1.43 - - - - - - - - - - - - - - - - - - - - - -2.72
- 3.84 -0.46 2.27 - - - - 3.05 - - - - - -2.81 - 3.07 1.69 - - - - - - - 2.5 -0.17 - - - - - - - - - - - - - - - - - - 0.58 - -
0.25 4.21 2.23 0.94 -1.55 - - - 3.58 - - - - - -7.88 1.69 1.57 -1.28 - - - - - - - 1.49 - - - - - - - - - - - - - - - - - - - - - -
- 4.7 -0.22 - - - - - 3.86 - - - - - - - -0.29 - 2.08 -0.19 - -0.63 - - - - - - - - - - - - - - - - - - - - - - - - - -
- 5.15 -1.66 - - - - - 3.0 - - - - - - 1.23 - - - - - - - -0.49 - 0.1 - - - - - - - - - - - - - - - - - - - - - -
- 4.26 -1.19 2.2 -4.19 0.41 -1.06 -1.64 1.34 -1.8 -0.33 -0.39 -0.84 -1.22 -1.31 1.75 0.83 0.58 -2.85 -1.18 -1.62 -2.24 -0.56 -3.84 -0.94 0.3 -3.38 -1.46 -2.24 -1.84 -2.88 -4.13 -1.79 -2.74 -3.3 -2.06 - -2.05 -3.43 -1.05 -0.79 -1.0 -1.85 -2.86 -1.88 -1.98 -2.9 -0.51
- 4.18 - - 1.77 - - - 4.13 - - - - - - - - 3.18 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- 3.09 2.1 2.05 -1.73 - - - 3.75 - - - - - -4.73 2.57 2.38 1.07 - - - - - - - 2.01 - - - -5.15 - - - - - - - - - - - - - - - - - -
- 1.9 - 3.48 - - - - 2.85 - - - - - - 4.49 - - - - - - - - - 1.8 - - - - - - - - - - - - - - - - - - - - - -
-0.45 3.14 0.46 1.55 -1.21 -1.83 1.51 0.33 2.8 -0.43 - -2.97 -2.34 - -1.06 3.05 2.2 -0.55 -3.4 0.82 - -2.69 - -3.99 -1.56 1.57 - - - -2.59 -1.13 -1.84 -3.36 - - - - -2.82 - - -1.31 - - -3.1 - -2.84 - -4.13
-0.19 3.44 -0.35 0.78 -0.57 0.08 0.35 -1.74 2.45 -0.61 -1.9 - -2.22 -1.32 -2.76 1.07 1.68 -0.67 1.7 -0.13 - 0.53 -0.36 - -0.07 2.1 -0.21 - -2.32 -1.45 -1.35 -2.07 - -1.95 -1.1 - - - -1.23 - -1.39 -0.55 -1.9 - -1.8 -0.9 - -1.44
-2.47 2.19 2.05 -2.15 0.31 0.93 1.49 1.43 2.54 -0.07 - - -3.9 - -1.72 0.83 -0.59 0.81 - -0.58 -0.1 -0.25 1.46 -1.83 -1.14 0.59 -2.86 -0.64 -4.0 -0.14 -1.17 -1.38 -1.11 -0.82 -2.76 -0.73 -1.13 0.83 - -0.78 -1.5 -1.77 -0.61 -1.24 -1.92 0.85 - -0.89
- 4.32 - 1.18 - 1.86 -0.53 2.5 2.71 -2.57 - - - - -3.3 - 1.11 -0.74 - - 0.69 - - - -0.05 1.09 -0.27 - - -3.12 - - - - - - - - - - - - - - - -0.75 - -
- 2.04 1.15 0.98 -2.6 - - - 4.18 - - - - - -4.61 3.73 1.61 - - - - - - -1.51 - 2.22 - - - - - - - - - - - - - - - - - - - - - -
-0.33 3.67 0.74 0.99 -1.3 - - -0.17 3.85 - - - - - -4.33 0.39 2.87 -0.32 - - - - - 0.25 - 2.14 - - - - - - - - - - - - - - - - - - - - - -
-0.04 1.65 1.14 -0.25 -1.05 - -0.1 1.39 3.4 -1.53 - - - - -2.82 1.43 2.2 -0.21 - -1.2 - -0.49 - 0.42 -0.62 2.79 - -2.03 -1.04 -0.6 -1.36 -2.26 - - -1.52 -0.62 -2.29 -1.04 - -1.46 -1.82 -1.18 -0.88 -0.12 -0.88 - -0.96 -1.81
0.96 2.97 0.1 1.69 -0.28 - - - 3.43 - - - - - -5.6 3.19 3.11 -1.61 - - - - - - - 2.0 - - - - - - - - - - - - - - - - - - - - - -2.25
-1.48 3.54 1.15 -0.7 -1.51 -0.5 0.46 -0.15 2.56 -2.58 - - - -3.19 -7.6 2.25 1.52 -0.64 - - - -2.15 - -1.64 - 1.73 - -1.44 0.65 -1.25 0.54 -2.51 -1.04 -0.55 -3.66 -1.76 1.06 -1.69 -0.73 -1.38 - -2.31 -2.05 -0.81 -2.91 -1.72 -0.64 -0.91
- 3.15 1.9 -1.25 -1.42 -0.29 -1.99 -0.6 2.99 -1.41 - -3.88 -1.62 -1.19 -2.81 - 1.52 0.81 -1.29 1.45 1.55 0.81 -3.52 0.7 1.65 -0.41 0.03 - - -1.93 -1.92 -2.31 -3.68 - -3.73 -4.56 - -0.54 -3.88 -1.67 -1.16 - -1.63 -2.93 -3.33 0.29 -2.66 -2.75
-1.34 3.5 0.88 0.63 -6.31 -4.94 - - 3.85 - - - - - -6.84 3.44 2.22 -0.67 - -1.98 - - - -4.45 -5.67 0.96 - - - -4.94 - - - - - - - - - - - - - - - - - -
-0.68 1.94 0.62 1.92 -2.88 0.48 -0.18 -0.88 0.31 -3.64 -4.9 -2.11 -4.13 - -3.46 3.77 1.26 -2.62 -3.78 -0.55 -0.85 0.85 - - 3.18 -2.79 1.7 -4.81 -1.82 -3.22 -3.93 -4.06 -5.94 - -0.09 - - -4.5 - - -2.98 - -5.04 -4.32 - -4.06 - -6.36
- - 1.8 2.99 - - - - 4.51 - - - - - - 3.78 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- 3.47 -0.8 -0.37 - - - - 4.52 - - - - - -3.78 - 1.92 - - - - - - 0.51 - 2.87 - - - -5.2 - - - - - - - - - - - - - - - - - -
0.26 3.51 0.48 -1.03 -10.23 - - -10.36 3.93 - - - - - - 0.4 2.92 - - - - - - 2.02 - 2.41 - - - - - - - - - - - - - - - - - - - - - -
2.58 0.76 1.11 -0.64 -4.67 -1.9 -1.63 -4.5 4.13 - - - -3.53 - -4.21 3.6 0.52 -0.17 - - - - - -2.08 - 1.95 -4.49 -3.12 -2.93 -6.14 -5.08 - -5.54 -3.79 -2.93 - - - - - - - - - - -4.69 -3.46 -5.14
- 4.97 0.28 - -1.71 - - - 3.18 - - - - - -4.78 2.33 -0.46 -2.7 - - - - - -2.13 - - - - - -6.11 - - - - - - - - - - - - - - - - - -
- 3.06 0.91 0.79 0.72 2.34 1.39 2.24 3.77 -2.13 - - 0.13 -0.86 -4.36 - -0.39 -1.29 - -0.88 -0.06 - - -1.19 0.18 -1.43 0.24 - - -2.87 - - -3.31 - - - - - - - - - - - - - - -1.32
-0.35 3.74 0.4 0.64 -0.92 - - - 3.92 - - - - - -5.6 - 3.16 -1.52 - - - - - - - 2.57 - - - -3.93 - - - - - - - - - - - - - - - - - -
- 3.54 -0.6 -2.17 -3.11 - - - 3.66 - -0.88 -0.7 - - - 2.61 1.92 -0.93 - - - - -0.47 0.01 - 2.65 -0.76 -0.09 -0.24 -3.17 -2.49 -2.04 - - - - - - - - - - - - - - -1.82 -
0.55 3.72 1.74 -0.89 -3.25 - - - 4.27 - - - - - -5.66 1.98 1.67 -0.73 - - - - - - - 1.22 - - - -5.94 - - - - - - - - - - - - - - - - - -
- 4.25 - - - - - - 4.61 - - - - - -0.47 - - - - - - - - - 0.69 1.16 - - - - - - - - - - - - - - - - - - - - - -
- 2.99 0.66 0.74 - - - - 4.42 - - - - - - -0.03 2.14 1.26 - - - 1.39 - 1.75 -1.13 0.26 - - - - - - - - - - - - - - - - - - - - - -
-0.66 0.17 1.0 2.97 0.67 1.26 1.41 -0.21 1.81 -3.85 -0.77 -1.21 - -4.73 -3.61 3.18 0.54 0.01 1.42 1.21 1.34 0.17 -0.79 -2.57 0.42 -0.99 -2.34 -2.43 -1.73 -1.14 - - - - -3.63 - -3.85 - - - - - -5.02 -4.39 - - - -4.45
- - - 3.67 -1.02 -1.8 0.03 0.23 1.9 - -1.73 - - - -5.39 4.45 -2.78 - - - - - - - - - - -0.55 1.54 -1.37 -3.26 - -3.69 0.25 - - - - - - - -2.62 -2.79 - -2.22 - - -1.13
1.68 2.84 0.39 0.64 -0.9 - -0.05 - 3.93 - - - - - - 3.03 2.25 -0.66 - - - - - - - 2.15 - - - - - - - - - - - - - - - - - - - - - -
- 4.29 0.52 3.36 - - - - - - - - - - - 4.06 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- 4.31 - - - - - - 3.85 0.83 - - - - -0.85 2.61 - - - - - - - - - - - - - - - - 0.03 - - 2.1 - - - - - - - - - - - -
- 4.03 - - - - - - 4.98 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- 3.0 2.29 0.63 - -0.96 - - 4.11 -4.36 -2.25 - -3.61 - -7.32 3.21 0.06 -1.65 -1.04 -2.04 - -2.17 -2.26 -2.18 - 0.67 -3.13 -3.03 -2.01 -4.43 - - - - - - - -1.15 - -2.43 -1.8 - - - -1.95 - - -3.89
- 3.93 0.29 1.52 -3.98 -1.9 -2.55 - 3.69 - -1.75 - - - -4.37 - 2.57 -1.23 - - - - -1.34 -2.31 - 2.93 -3.16 - - -3.99 - - - - - - - - - - - - - - - - - -2.89
1.42 4.55 1.03 0.06 - - - - 2.25 - - - - - - 1.93 2.31 - - - - - - - - 2.4 - - - - - - - - - - - - - - - - - - - - - -
-1.12 4.76 0.77 -0.3 - - - - 2.06 - - - - - -6.83 -0.17 1.22 2.53 - -2.57 - - - 0.82 0.4 0.04 - -1.41 - -3.63 - - - - - - - - - - - - - - - - - -
- 2.67 0.08 -0.22 -2.64 - - - 3.24 -2.49 -1.65 - - - -1.77 4.17 1.8 -1.5 - - - - - -1.4 - 2.65 - - -2.07 -4.72 - -0.83 - - - - - - - - - - - - - - - -
1.71 3.71 1.68 -0.76 -1.25 - - - 3.63 - - - - - -3.29 3.0 1.89 - - - - - - - - 1.59 -2.9 - - -3.14 - - - - - - - - - - - - - - - - - -
- 4.21 -0.02 - - - - - 4.25 - - - - - - - 1.34 - - - - - - - - 2.8 - - - - - - - - - - - - - - - - - - - - - -
- 0.97 - - - - - - 4.39 - - - - - - 4.29 1.1 - - - - - - - - 1.63 - - - -2.07 - - - - - - - - - - - - - - - - - -
- 2.39 1.28 2.9 - - - - 2.76 - - - - - -2.6 4.05 2.69 - - - - - - - - 1.57 - - - - - - - - - - - - - - - - - - - - - -
- 3.58 2.51 -2.12 - - - - 3.75 -1.42 - -1.5 -3.11 - -5.24 2.62 1.69 0.8 - - - - - -1.53 -1.32 1.2 - -2.52 -3.21 -2.79 -3.8 - - -3.02 - - - - - -2.28 - -2.46 - - - - -1.44 -1.84
- 4.32 - - - -1.03 - - 3.94 - - -0.72 - - -2.71 - 1.36 -1.6 - -0.87 - - - -0.59 0.61 2.02 0.55 - -2.07 - - - - - - - - - - - - - - - - - - -
- 4.7 - - - - - - 2.31 - - - - - - - -1.31 - - - - 2.12 - - - 2.45 - - 2.02 - 0.13 0.69 - - - - - - - - - - - - - - - -3.11

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.