Heatmap: Cluster_180 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	Archegonia (mature)	Antheridia (9 DAI)	Antheridia (small, 11 DAI)	Antheridia (mature, 14-15 DAI)	Antheridia (japan)	Antheridia	Antheridia Reute	Antheridia Gransden	Sperm cell packages	Gametophore	Gametophore (dehydrated)	Gametophore (rehydrated)	Gametophore (hydroponic)	Gametophore+auxin (hydroponic)	Leaflets	Paraphysis	Sporophyte (9 DAF)	Sporophyte (16 DAF)	Sporophyte S1	Sporophyte S2	Sporophyte S3	Sporophyte S4	Sporophyte (10 DPC)	Spore capsule (green)	Spore capsule (green, reute)	Spore capsule (mature)	Spore capsule (mature, reute)	Spores (germinating, continous light)	Protoplast	Protonema	Protonema (liquid culture)	Protonema+aba	Protonema+gametophore	Protonema+gametophore (continous light)	Protonema+gametophore (heat stress)	Protonema+gametophore (high light)	Protonema+gametophore (low light)	Protonema+gametophore+acetone	Protonema+gametophore+gib.acid (continous light)	Protonema+gametophore+glucose (blue light)	Protonema+gametophore+glucose (darkness)	Protonema+gametophore+glucose (far red light)	Protonema+gametophore+glucose (red light)	Protonema+gametophore+glucose (uv-b light)	Protonema+gametophore+jasmonate	Protonema+gametophore+stringolactone	Protonema+glucose (continous light)	Chloronema
Pp3c10_4110V3.1	-2.81	-0.75	1.47	2.05	4.44	-1.84	0.68	-1.64	0.83	-2.08	-4.93	-5.25	-2.97	-4.37	-1.55	-6.35	-6.09	-0.72	1.2	1.26	0.07	-0.4	2.2	-3.05	-0.48	-2.56	-3.37	-6.62	-5.89	-5.73	-3.49	-8.56	-8.88	-6.99	-7.78	-6.77	-8.52	-1.83	-6.61	-3.78	-5.61	-8.24	-4.16	-4.93	-6.64	-1.76	-4.5	-4.1
Pp3c10_4770V3.1	-	-	-	-	5.58	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Pp3c11_17010V3.1	-0.43	-0.42	0.16	-2.12	2.22	0.22	0.26	0.27	0.09	-0.05	-1.66	-1.39	0.07	-0.38	0.03	0.25	0.14	0.1	0.14	0.06	-0.01	0.25	0.69	-0.01	-0.12	0.21	-0.4	0.23	-0.34	-0.28	0.05	-0.6	-0.18	-0.24	-0.54	0.36	0.27	0.07	-0.61	-0.37	-0.7	-0.76	-0.17	-0.31	-0.6	0.08	-0.24	-0.15
Pp3c11_20020V3.1	-	1.62	-1.04	-0.2	3.81	-	-	-	-	-0.52	-0.63	-	1.28	-	0.47	-1.04	-	-	-	-	-	2.3	-	-	1.89	-	-0.4	-1.4	-6.61	0.04	-	-	-2.58	-	-	-	-	-	-0.73	1.03	0.68	-0.3	-1.62	-0.21	-0.58	2.42	-1.48	-1.69
Pp3c11_24219V3.1	-2.39	1.03	-1.37	2.33	3.13	-1.22	-0.93	-2.79	-	0.85	-1.25	-0.54	-0.58	-0.57	-1.68	1.47	-1.1	-0.82	-	-1.48	-1.01	-0.25	-	1.27	1.61	2.25	1.98	-1.89	-2.73	-1.93	-0.39	-1.43	-2.2	-2.22	-1.91	-1.89	-1.08	-1.32	-	-1.15	-2.06	-3.8	-1.56	-2.19	-2.49	-0.65	-2.17	-2.01
Pp3c11_50V3.1	-	-	-	-	4.82	-	-	-	-	-	-	-	-	-	-	-	-	-	-2.79	4.2	0.36	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Pp3c12_24927V3.1	-	-	-	-	5.58	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Pp3c13_21230V3.1	2.2	-	0.49	-	3.75	2.06	-	-	-	-	-	0.92	-	-	-	3.79	-	-	-	-	-	-	-	-	-	-	-	-	0.66	-	-	-	-	-	-	1.28	-	-	-	0.98	-	1.43	-	-	-	-	-	-
Pp3c14_26910V3.1	2.43	-1.04	0.83	-1.41	4.34	-	-	-	-2.52	-	-	-	-	-	-	1.89	2.5	-	-	2.74	-	-0.33	-	-	-	0.99	-	-0.42	-	-4.96	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Pp3c14_6360V3.1	-	-	-	-	5.58	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Pp3c16_14180V3.1	-0.12	-0.39	0.55	-2.83	4.44	1.97	2.07	2.14	0.43	-2.29	-7.38	-6.44	-1.89	-3.98	-2.22	2.38	-2.83	-4.03	-1.69	-2.85	-2.87	-2.64	-5.31	-6.09	-3.88	-5.55	-6.02	-2.93	-3.06	-3.14	-2.22	-3.62	-2.89	-2.75	-3.52	-3.29	-3.96	-3.32	-4.73	-3.24	-4.74	-4.61	-3.09	-3.45	-4.1	-3.06	-2.91	-4.12
Pp3c17_10600V3.1	-2.83	0.26	0.31	1.05	3.79	2.72	1.54	1.88	-0.02	-1.97	-8.89	-7.0	-0.69	-3.73	-3.95	-4.79	-1.06	-2.73	-2.01	0.24	-1.52	-1.57	-2.94	-3.27	0.56	-0.37	-1.04	-4.77	-5.38	-3.15	-5.19	-4.41	-3.68	-4.42	-6.6	-5.38	-4.82	-1.93	-5.55	1.67	-0.03	0.47	0.39	-2.91	-3.99	-1.9	-1.52	-2.95
Pp3c17_7940V3.1	-	-	-	3.06	4.15	-	-	3.58	-	-	-	-	-	-	-	-	3.32	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Pp3c18_15900V3.1	0.81	1.39	0.26	0.6	3.65	2.76	1.42	1.96	-2.16	-1.9	-9.34	-5.8	-2.58	-3.82	-2.08	0.54	0.11	0.37	-2.05	0.46	1.37	0.9	-3.68	0.08	0.49	-1.75	-3.17	-4.42	-1.43	-4.64	-5.01	-6.58	-5.05	-4.83	-3.97	-3.4	-5.21	-5.8	-4.79	-5.1	-5.42	-4.89	-4.11	-4.31	-5.31	-4.81	-5.07	-3.75
Pp3c19_13470V3.1	-	-	-	-	3.89	-	-	-	-	-	-	-	-	-	-	-	3.12	-	-	-	-	-	-	-	-	-	-	-	3.96	-	-	-	-	-	-	-	-	-	-	3.16	-	-	-	-	-	-	-	-
Pp3c1_21310V3.1	-	-	-	-	5.58	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Pp3c1_5410V3.1	-	-	-	-	5.04	-	-	-	-	-	-	3.91	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Pp3c20_16320V3.1	0.14	-0.15	0.23	-2.28	2.93	0.05	-0.51	-0.27	-0.12	-0.12	-0.82	-0.8	0.22	0.07	-0.11	0.44	0.63	-0.17	0.48	0.61	0.71	0.8	-1.03	-0.83	0.27	-0.43	-0.1	-1.17	-1.34	-0.81	-0.74	-0.81	-0.51	-0.64	-0.93	-0.72	-0.9	-0.17	-1.03	-0.08	-0.09	-0.14	0.07	-0.47	-0.47	-0.09	-1.0	-0.74
Pp3c20_19146V3.1	-1.23	-1.52	-1.7	-	5.3	-0.8	-	-3.44	-3.25	-	-3.24	-5.06	-	-4.32	-0.5	-1.91	-0.36	-1.55	-0.26	-0.69	-1.33	-0.58	-1.77	-1.74	-5.28	-1.84	-	-	-2.84	-3.12	-5.32	-4.92	-5.78	-3.74	-5.11	-3.91	-4.63	-2.85	-	-	-3.4	-4.55	-	-4.28	-	-2.98	-	-2.96
Pp3c20_7340V3.1	-	-	-2.73	-0.05	4.66	3.05	1.62	2.89	-	-	-	-	-	-	-8.87	-	1.1	-	-	-2.71	-	-	-	-2.22	-	-2.53	-4.06	-	-5.37	-8.72	-6.33	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Pp3c20_7600V3.1	-	-	-	-	5.58	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Pp3c20_8580V3.1	-	-	-	-	4.29	-	-	-	-	-	-	-	-	-	-	4.44	-	-	-	-	-	-	-	-	-	2.74	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Pp3c21_14410V3.1	-	-	-	-	5.58	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Pp3c21_3220V3.1	-	-	-	-	5.58	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Pp3c22_12670V3.1	-	0.46	1.78	0.54	5.11	-	-	-2.24	-2.5	-	-	-	-	-	-5.38	-0.68	1.41	-1.98	-	-	-	-	-	-0.82	-	1.45	-	-	-	-3.88	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Pp3c22_9600V3.1	-0.21	-0.13	0.58	0.49	4.2	1.76	1.54	1.56	-1.03	-0.22	-4.0	-3.74	-0.84	-2.32	0.2	0.27	-0.77	-0.36	0.45	0.74	0.73	0.95	-1.7	-0.58	-1.28	-3.78	-5.57	-10.17	-11.47	-6.6	-3.44	-9.86	-7.6	-11.47	-	-	-	-2.01	-5.96	-2.36	-9.12	-5.11	-0.91	-2.25	-4.71	-2.26	-3.93	-9.14
Pp3c24_11820V3.1	0.83	1.25	-0.83	-0.79	3.9	3.28	1.73	2.41	1.84	-1.82	-	-4.18	-2.39	-2.79	-2.13	1.44	-0.91	-3.76	-	-	-	-2.78	-	-	-4.29	-0.6	-2.97	-	-5.55	-5.47	-6.51	-	-	-	-	-	-	-5.31	-4.55	-3.43	-	-3.56	-2.42	-4.78	-	-3.18	-5.3	-5.76
Pp3c24_8913V3.1	-	-0.99	-0.29	-0.08	4.01	2.57	0.85	1.71	-	-0.79	-1.12	-0.32	0.42	-0.05	-1.92	1.54	0.64	-1.64	-1.92	0.07	-0.63	0.35	-	-2.06	-0.79	-2.86	-	-2.9	-1.05	-2.1	-2.6	-0.22	-3.72	-3.23	-	-	-	-0.84	-	-0.83	-1.67	-0.54	-2.75	-2.56	-	-0.88	-2.98	-
Pp3c25_8040V3.1	-0.05	-1.02	-1.21	-0.31	4.11	2.37	0.65	1.71	0.68	0.95	-1.83	-2.32	1.11	0.87	0.53	-4.63	-0.59	-6.58	-0.02	0.96	-2.06	-2.37	-0.1	-6.4	-2.93	-0.83	-5.54	-	-5.91	-4.26	-1.24	-3.95	-2.54	-	-	-7.6	-2.59	-2.52	-	-2.21	-1.15	-1.87	-2.59	-2.62	-4.33	-3.14	-4.35	-1.73
Pp3c26_6549V3.1	-	-3.03	0.2	-0.92	4.1	-0.74	-0.4	1.86	-	-0.31	-2.49	-	0.28	-2.04	-0.27	-3.17	0.44	-1.47	-1.63	-0.84	-0.82	-2.27	-0.54	1.87	-2.76	-0.77	-0.56	-1.94	-2.47	-1.33	0.13	-1.97	-3.46	-2.8	-	-3.9	-2.94	-0.53	-3.07	0.38	0.96	0.8	-0.35	-2.79	-2.22	-1.03	-3.11	0.43
Pp3c26_8250V3.1	1.12	-5.28	-0.3	-4.21	3.7	1.92	-0.15	1.8	0.85	-0.51	-	-	0.13	-3.41	1.36	2.07	2.29	-4.67	-	0.27	0.22	1.75	-4.01	-3.27	0.22	-0.07	-1.56	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-6.05	-	-	-	-	-
Pp3c2_18040V3.1	0.92	0.93	0.6	0.91	3.4	1.92	1.45	1.19	-0.1	0.05	-0.12	-0.36	0.05	-0.69	0.09	1.38	-0.28	-1.68	-3.13	-0.01	0.96	0.94	-4.65	-2.22	-0.34	-2.4	-3.03	-	-5.91	-4.36	-2.12	-6.33	-5.36	-10.11	-10.77	-7.71	-6.89	-0.79	-4.43	-1.32	-2.41	-0.12	0.45	-1.62	-3.35	-0.76	-3.56	-4.7
Pp3c2_21430V3.1	-0.34	0.87	0.92	0.29	3.7	1.65	0.94	1.47	0.03	0.06	-4.67	-5.02	-0.76	-1.83	0.12	-1.32	0.07	0.12	0.02	1.17	1.81	1.36	-1.93	0.26	0.76	-1.23	-2.21	-6.98	-9.52	-5.71	-3.49	-6.24	-7.18	-8.73	-	-9.21	-7.8	-1.68	-6.24	-2.51	-8.11	-5.57	-1.22	-2.76	-4.8	-1.82	-3.97	-8.78
Pp3c2_36450V3.1	-	-2.81	-1.31	1.48	2.11	0.51	2.18	1.5	1.57	-1.93	0.62	0.63	-	-	-1.71	1.62	1.22	-1.05	-	-	-	-	-	-0.95	-2.13	0.63	-	-	3.26	-0.6	-1.71	-0.7	-0.63	-	-1.95	0.68	-	-	-1.57	-2.35	-0.76	-	-	-	0.19	-1.78	-2.04	-1.8
Pp3c3_19050V3.1	-0.21	-0.82	-0.03	-2.22	2.32	0.81	0.62	0.64	-0.3	0.07	-0.71	-0.65	0.11	-0.41	0.04	-0.04	0.42	-0.08	0.4	0.54	0.24	-0.13	0.86	-1.12	-0.17	-0.08	-0.1	0.04	-0.96	-0.32	-0.11	-0.06	-0.34	-0.54	-0.89	-0.31	0.17	0.21	-1.38	-0.52	-0.71	-0.89	-0.2	-0.52	-0.66	0.11	-0.51	-0.26
Pp3c3_9120V3.1	-	-	-	-	5.58	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Pp3c4_80V3.1	-	-0.95	-	-	4.78	-	-	-	-	-	-	-	-	-	-	-	-	-	-	3.4	0.89	1.69	-	0.98	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.27	-	-	-	-
Pp3c6_13944V3.1	-	-	-	-	5.58	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Pp3c6_19920V3.1	-0.29	-0.05	0.81	-0.63	3.01	0.48	0.78	0.89	-0.26	-0.59	-1.89	-1.94	-0.45	-0.88	-0.26	-0.55	0.77	-0.77	0.34	0.62	0.53	0.18	0.51	-0.7	-0.16	-0.94	-0.52	-0.75	-0.82	-0.86	-0.69	-0.85	-0.58	-0.34	-1.15	-0.98	-0.64	-0.4	-0.94	-0.28	-0.35	-0.28	-0.17	-0.38	-0.61	-0.34	-0.4	-0.7
Pp3c6_22490V3.1	-	-0.83	-0.83	-1.8	4.37	2.61	1.4	1.89	-3.68	-1.32	-4.63	-3.24	-4.57	-3.24	-2.19	-2.75	-3.67	-6.12	-6.6	-0.37	-2.84	-2.99	-3.93	-0.98	-2.0	-3.05	-4.48	-4.11	-4.76	-1.03	1.93	-1.83	-1.47	-1.03	-	-1.21	-1.02	-2.09	-5.18	-1.63	-2.03	-3.36	-1.13	-2.47	-3.77	-2.12	0.73	-2.37
Pp3c6_23800V3.1	-	-	-	-	5.58	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Pp3c6_5630V3.1	-	-	-	-	3.96	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	5.02	-	-
Pp3c6_760V3.1	0.98	0.71	0.54	0.9	3.95	1.77	1.64	1.56	-0.39	-2.77	-4.68	-4.46	-2.54	-3.58	-2.85	1.63	-1.48	-2.87	-2.65	0.51	1.85	1.16	-2.96	-5.17	-1.57	-2.75	-3.44	-4.63	-3.85	-3.03	-3.71	-3.76	-3.25	-4.21	-4.61	-6.6	-5.27	-2.1	-3.34	-1.45	-3.57	-2.53	-0.8	-1.96	-2.58	-2.32	-3.26	-3.8
Pp3c7_17090V3.1	-	-	0.02	1.75	4.35	0.67	0.92	-0.18	1.36	-	-	-6.4	-6.55	-	-8.55	-2.78	-1.07	-1.43	1.72	2.06	1.47	1.49	-3.62	-2.35	0.23	-1.39	-2.16	-5.7	-	-	-	-	-	-	-	-	-	-6.24	-	-5.73	-	-5.89	-5.81	-	-	-6.24	-6.04	-7.93
Pp3c7_2650V3.1	1.51	0.15	0.47	-0.38	3.83	1.43	0.96	0.86	-1.15	-0.36	-2.66	-3.24	-0.79	-2.59	-0.97	-1.4	0.84	-0.74	0.65	0.98	1.57	1.49	-5.34	0.59	0.82	-1.66	-2.26	-5.54	-4.54	-4.72	-2.86	-4.38	-5.22	-6.61	-6.67	-6.25	-5.54	-2.26	-5.19	-1.78	-6.35	-5.0	-0.27	-1.59	-4.1	-2.48	-2.69	-5.86

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.