Heatmap: Cluster_138 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Archegonia (mature)
Antheridia (9 DAI)
Antheridia (small, 11 DAI)
Antheridia (mature, 14-15 DAI)
Antheridia (japan)
Antheridia
Antheridia Reute
Antheridia Gransden
Sperm cell packages
Gametophore
Gametophore (dehydrated)
Gametophore (rehydrated)
Gametophore (hydroponic)
Gametophore+auxin (hydroponic)
Leaflets
Paraphysis
Sporophyte (9 DAF)
Sporophyte (16 DAF)
Sporophyte S1
Sporophyte S2
Sporophyte S3
Sporophyte S4
Sporophyte (10 DPC)
Spore capsule (green)
Spore capsule (green, reute)
Spore capsule (mature)
Spore capsule (mature, reute)
Spores (germinating, continous light)
Protoplast
Protonema
Protonema (liquid culture)
Protonema+aba
Protonema+gametophore
Protonema+gametophore (continous light)
Protonema+gametophore (heat stress)
Protonema+gametophore (high light)
Protonema+gametophore (low light)
Protonema+gametophore+acetone
Protonema+gametophore+gib.acid (continous light)
Protonema+gametophore+glucose (blue light)
Protonema+gametophore+glucose (darkness)
Protonema+gametophore+glucose (far red light)
Protonema+gametophore+glucose (red light)
Protonema+gametophore+glucose (uv-b light)
Protonema+gametophore+jasmonate
Protonema+gametophore+stringolactone
Protonema+glucose (continous light)
Chloronema
- - - 3.52 0.13 2.1 3.31 2.45 - - - - - - - 2.06 -0.35 1.08 - - - - -0.14 2.92 - -2.16 - - - -4.91 - - - - - - - - - - - - - - - - - -
- 1.14 0.38 3.06 1.81 2.95 3.17 1.32 - - - -3.84 -2.92 - - 2.87 0.19 0.13 - -2.72 - - - -2.86 -0.1 0.45 -1.01 - - -4.16 -3.46 - -3.91 - - - - - - - - - -2.98 - - -1.99 - -4.55
- 1.16 -0.96 2.56 2.69 2.36 3.92 0.25 0.01 - - - - - -6.76 2.13 1.3 - - - - - - - - 1.82 - - - - - - - - - - - - - - - - - - - - - -
- - 0.13 3.69 1.35 1.25 4.6 2.15 - - - - - - -6.52 - -3.15 - - - - - - - - -1.98 - - - -5.06 - - - - - - - - - - - - - - - - - -
- 0.01 -1.11 3.41 -0.77 2.23 3.8 3.13 0.59 - - - - - -7.32 0.87 1.3 -3.32 - - - - - - - 1.06 - - - -7.72 - - - - - - - - - - - - - - - - - -
-0.56 -3.21 -2.6 2.94 0.39 2.54 4.57 2.43 0.44 -6.72 - - -6.61 -7.5 -6.85 -2.7 -5.13 -5.67 - -6.22 -5.36 -7.57 - 0.19 -3.14 -7.7 -4.97 -5.85 -7.93 -6.01 -6.72 -6.47 -6.47 -6.89 -7.14 -8.51 -8.67 -7.06 -7.04 -8.81 - - -6.38 -8.09 -7.25 -7.23 - -6.65
- - - 2.15 -0.3 2.29 3.61 3.47 2.27 - - - - - - 2.42 0.8 - - - - - - - - 0.8 -0.04 - - - - - - - - - - - - - - - - - - - - -
- - -2.12 3.5 2.38 2.14 4.04 2.1 2.3 - - - - - -6.59 - -0.83 -3.17 - - - - - - -1.65 -2.58 - - - -4.11 - - - - - - - - - - - - - - - - - -
- - - - - 3.25 5.27 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- 1.86 -3.31 2.58 2.0 2.45 2.97 2.95 - - - - - - - 2.8 -0.63 - 1.0 -2.58 -1.07 -1.59 - - -2.07 -2.51 1.06 - - - - - - - - - - - - - - - - -2.79 - - - -
- 3.2 -3.62 3.28 2.69 2.98 3.09 1.66 -0.07 -2.71 - - -2.56 -2.89 -6.4 - -1.26 -2.19 - -1.77 - - - - -2.41 -2.01 -3.3 - - -5.44 - - - - - - -2.98 - - - - - - - - - - -4.95
- -0.21 - 2.82 -1.51 2.45 4.38 2.53 2.7 - - - - - - - -0.22 - - - - - - - - -1.47 - - - - - - - - - - - - - - - - - - - - - -
- 1.21 -0.84 3.64 -0.2 1.95 3.82 2.26 1.98 - - -4.25 - - -6.09 0.87 0.65 -3.61 - - - - - -5.28 - 0.54 - - - -7.6 - - - - - - - - - -5.64 - - - - - - - -
-0.69 2.55 0.37 -0.62 -2.28 1.5 3.99 -1.38 0.94 -1.44 -1.24 -1.96 -1.71 -3.76 -3.55 -2.38 1.42 -0.11 -1.19 0.21 -2.21 -1.16 - -1.39 -1.65 2.06 -1.77 -3.33 -3.06 -1.19 -0.14 -0.6 -2.75 -3.26 -3.45 -3.92 -3.15 -1.79 -3.72 -2.29 -1.37 -1.89 -2.0 -3.91 -3.86 -1.22 -1.01 -1.62
- 2.58 - 2.52 -1.59 2.75 4.58 1.03 -0.47 - - - - - - 1.01 -3.16 -3.74 - - - - - -2.91 - -2.15 - - - - - - - - - - - - - - - - - - - - - -
-2.66 2.75 -1.36 2.62 1.65 2.82 3.13 2.33 -0.62 -3.9 -1.21 -1.41 - -2.25 -3.82 - 1.29 -1.1 -1.58 -1.28 - - - -2.72 -2.63 -2.83 -1.58 - 0.41 -2.74 -2.85 - -3.72 -2.07 -2.05 - - - - - - - -1.84 -1.39 -2.27 -0.22 -2.64 -1.6
-3.14 2.85 -0.33 2.25 -0.39 1.05 3.53 1.93 2.15 - - - - - -8.21 3.13 0.81 -3.99 - - - - - - - 0.94 - - - -4.82 - - - - - - - - - - - - - - - - - -
- - -0.79 2.72 0.85 0.08 4.24 2.71 3.02 - - - - - - - 0.32 0.91 - - - - - - - 0.33 - - - - - - - - - - - - - - - - - - - - - -
-4.06 1.63 1.85 1.91 - 1.3 4.06 -1.31 1.73 -3.71 - - - - -5.87 2.18 0.96 -4.02 -2.92 -3.61 - 1.12 - - 0.44 1.25 0.66 - - -6.93 -5.19 -3.27 - - - - - - - - - - - - - -4.17 -3.98 -
- - -1.58 -1.22 -0.87 1.51 4.33 -0.18 0.98 - - - - - -1.21 -0.29 -0.88 -1.46 - -1.88 - 1.39 - -1.86 3.24 -2.05 2.53 - - -4.13 - - - - - - - - - - - - - - - - - -
- - -1.59 0.38 -3.78 0.75 4.67 1.06 2.58 -2.55 -3.68 -2.38 -4.13 - -5.81 0.28 0.8 -0.39 - -2.04 -2.37 - - - 0.01 0.77 -0.44 0.08 -1.51 -1.27 -3.23 -2.84 -3.51 -2.72 -4.02 - -3.77 -3.81 - - - -3.65 - - -3.24 -3.33 -3.32 -3.68
-2.54 2.73 -2.77 2.75 2.48 2.08 3.05 2.42 0.35 -0.08 -2.68 - -1.78 -2.03 -0.65 0.36 -1.2 -2.15 - -0.63 -2.09 -1.37 - -3.56 -0.81 -0.43 -2.32 - -2.82 -3.81 -1.9 -3.19 -4.6 - - - -4.66 -1.49 - -3.81 - - -2.46 -2.03 -4.61 -0.45 -3.35 -2.96
1.39 0.76 -1.74 -0.02 0.3 -0.68 2.42 2.33 1.73 -0.31 0.73 0.44 -0.32 -0.96 -1.04 0.0 -0.63 -0.69 0.99 -0.26 -0.92 -0.44 1.32 -2.79 -0.62 0.47 -0.58 -1.21 -2.21 -1.03 -1.43 -1.45 -1.09 -0.9 -0.96 -0.38 -1.03 -0.34 -2.04 -1.01 -1.66 -1.01 -1.46 -1.29 -1.62 -0.74 -1.14 -1.42
-1.61 0.94 - 3.43 0.61 1.92 4.12 3.18 -1.36 - - - - - - 0.53 -0.47 -2.57 - - - - - - - -1.02 - - - - - - - - - - - - - - - - - - - - - -
-1.74 1.15 -2.05 3.22 1.01 2.11 3.84 2.63 0.89 - - - - - -6.6 2.16 0.24 -1.89 - -3.77 - - - -3.76 -4.98 0.2 - - - -8.25 - - - - - - - - - - - - - - - - - -
1.31 - 0.5 2.99 0.78 2.38 4.45 2.16 0.01 - - - - - - - -2.21 -3.26 - - - - - -2.55 - -2.58 - - - -2.82 - - -3.56 - - - - -2.68 -2.0 -2.17 -1.17 - - - - - - -
- - -3.3 -1.07 2.39 3.6 4.84 - -2.01 - - - - - -11.46 -0.17 -3.25 -6.38 -6.14 - - - - -7.14 - -3.77 - - - - - - - - - - - - - - - - - - - - - -
1.14 2.51 0.81 -0.05 -0.62 0.72 2.87 3.05 0.44 -2.21 -2.57 - 0.04 -1.89 -1.29 1.4 -0.12 0.63 1.68 - -1.14 -1.25 0.96 -2.48 - - -3.58 -2.72 -1.46 -0.96 -1.91 -4.19 -4.67 -1.88 -1.74 -2.41 -1.08 -1.56 -3.02 -1.52 -3.97 -4.62 -1.35 -2.35 -4.83 -1.81 - -1.93
- 2.53 1.33 3.96 -0.88 1.6 3.19 1.8 1.48 - - - - - -4.89 -0.17 1.05 -1.47 - - - - - - - 0.82 - - - -3.96 - - - - - - - - - - - - - - - - - -
-0.91 -0.67 -0.67 1.24 1.94 2.22 4.68 - - - - - - - - - 2.14 - - - - - - - - 2.41 - - - - - - - - - - - - - - - - - - - - - -
-4.36 - -0.88 4.16 0.91 1.43 3.61 3.65 -3.11 - - -4.63 - - - - -3.01 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-1.63 -1.12 -0.56 -2.14 0.14 1.44 2.6 1.14 -1.66 -0.2 -0.31 -0.42 -0.64 -1.99 -0.17 -0.88 0.44 -0.66 0.18 -0.35 0.3 0.27 -2.71 -1.45 1.2 0.09 0.72 -0.2 0.46 0.03 -0.42 -0.46 -0.13 0.36 0.41 -0.35 0.12 -0.8 -1.14 -0.77 -0.58 -0.71 -0.36 -0.47 -0.79 -0.86 -0.53 -0.05
- - - 4.13 - 3.79 4.06 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-0.7 0.49 -2.12 3.34 0.07 1.65 4.29 3.03 0.45 - - - - - -7.6 -0.14 -1.41 -1.49 - - - - - - - -0.42 - - - -6.68 - - - - - - - - - - - - - - - - - -
-2.37 -1.5 - 3.71 1.93 1.7 3.95 2.92 1.9 - -2.71 -3.38 - - -8.18 -3.09 -4.34 - - - - - - - - -4.49 - - - - - - - - - - -4.54 - - - - - - - - - - -
- 0.33 -2.86 1.41 1.43 2.68 3.88 2.29 -0.59 -2.81 1.09 0.24 -1.78 -2.61 -2.2 -3.91 -4.08 -4.53 - -2.34 -3.11 -3.41 - -4.42 0.77 -1.96 0.54 -4.0 -0.2 -4.44 -3.28 -3.03 -4.87 -2.78 1.42 -2.9 -3.38 -1.59 - - -4.04 -4.22 - - 0.15 -1.7 - -2.13
0.97 -0.58 1.36 2.87 -1.49 1.59 2.84 0.6 2.15 -2.34 0.14 -0.18 -1.1 -1.3 -3.85 0.89 -1.16 -1.14 -4.53 -1.66 -1.71 -2.31 -4.24 -2.8 1.77 -1.65 1.62 -2.29 -0.67 -2.06 -3.46 -1.32 -3.37 -3.37 -3.02 -2.89 - -1.61 -2.3 -1.56 -1.04 -0.74 -1.82 -2.19 -2.89 -1.49 -3.14 -2.63
- - -0.58 -0.82 1.19 2.9 5.2 - - - - - - - -4.29 - -2.52 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-1.08 -3.58 -2.39 -1.62 -3.98 3.16 5.14 -1.98 -4.01 -7.12 -4.82 - - - -10.26 -1.94 -2.18 -2.73 - - - -4.82 - 0.54 -5.75 -2.89 - - -6.37 - - - - - - - - - -5.29 - - - - - - - - -
1.3 -0.14 1.89 0.22 -6.56 2.16 4.06 1.48 -0.65 -3.49 - - -5.67 -4.94 -5.27 0.52 -0.86 2.2 -1.77 -2.68 -1.39 0.38 -1.64 -0.42 -1.45 1.8 -3.06 -0.12 - -5.53 -5.49 - -4.81 - -7.86 -5.64 - -3.13 - - - - -5.53 - - - -4.11 -8.36
-3.63 1.1 -1.86 3.8 0.2 2.26 4.03 2.11 -0.44 - -4.98 - - - -8.47 1.09 -0.75 -3.15 - - - - - -3.25 - 0.31 - - -6.45 -6.66 - - - - -6.24 - - - - - - - - - - - - -
-3.44 - -5.61 3.87 2.04 2.42 3.48 3.63 -3.04 - - - - - -9.83 -6.15 -5.82 -6.36 - - - - - - - -4.55 - - - - - - - - - - - - - - - - - - - - - -
-1.59 0.93 -0.55 -2.26 -0.81 1.37 2.98 0.54 1.55 -0.14 -2.56 -1.85 -0.56 -1.59 -0.16 -0.37 -0.23 -0.8 -3.45 0.28 -0.37 -0.22 -0.72 -1.55 -0.28 -0.13 -1.1 -0.32 -0.85 -0.09 0.89 -0.55 -0.53 -0.71 -0.33 -0.44 0.04 0.82 -1.01 -0.68 -1.33 -0.95 -0.71 -0.3 -1.34 0.84 -0.28 -0.01
-1.51 -3.49 -3.2 -2.64 -2.57 3.24 4.92 -2.72 -2.54 -3.58 -4.31 -3.62 -3.53 -3.42 -2.54 0.66 -1.05 -3.65 -1.88 -2.28 -2.8 -2.91 -4.71 -6.6 -5.42 -1.69 -3.9 -2.67 -2.24 -2.53 -3.67 -5.42 -2.37 -1.68 -1.25 -3.45 -3.36 -3.6 -2.7 -2.05 -4.67 -4.17 -2.4 -3.01 -2.2 -4.32 -4.04 -2.52
-1.51 -3.49 -3.2 -2.64 -2.57 3.24 4.92 -2.72 -2.54 -3.58 -4.31 -3.62 -3.53 -3.42 -2.54 0.66 -1.05 -3.65 -1.88 -2.28 -2.8 -2.91 -4.71 -6.6 -5.42 -1.69 -3.9 -2.67 -2.24 -2.53 -3.67 -5.42 -2.37 -1.68 -1.25 -3.45 -3.36 -3.6 -2.7 -2.05 -4.67 -4.17 -2.4 -3.01 -2.2 -4.32 -4.04 -2.52
- - - - - 3.38 4.97 2.66 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- -5.27 - 0.58 1.52 2.71 5.04 -2.96 -4.79 - -5.55 - - - -8.75 1.61 -0.89 - - - - - - - - -1.64 - - - - - - - - - - - - - - - - - - - - - -
-1.25 - - 1.94 -0.43 1.91 4.89 1.09 0.71 - - - - - -6.31 1.68 0.19 -1.5 - - - - - - - 0.16 - - - - - - - - - - - - - - - - - - - - - -
1.73 2.06 0.47 0.71 1.01 2.11 3.45 2.04 0.46 -3.57 1.78 1.28 -4.62 -2.86 -2.85 -2.38 - -2.49 -1.0 -0.99 - -1.61 - -2.56 -1.84 -0.03 -4.58 - 0.28 -2.49 - -0.8 - - 1.09 -3.74 - -3.01 - - - -4.14 - - -3.74 -4.3 -2.11 -0.58
- -4.29 -1.16 3.74 -1.37 2.29 4.08 3.12 -0.06 - - - - - -6.7 -3.07 -0.15 - - - - - - -4.13 - 0.29 - - - -8.11 - - - - - - - - - - - - - - - - - -
- -1.24 -1.96 3.22 2.4 1.61 4.15 1.68 1.67 - 0.41 1.28 - - - - 0.07 -1.54 -5.98 - - - - -4.14 -3.19 - - - - -6.75 - - -4.2 - - - - - -3.73 - - - - - - - - -
-3.18 1.48 -1.26 2.35 -0.2 1.4 3.43 1.69 3.02 - - - -4.71 - -6.37 3.15 0.89 -1.74 - -3.92 - - - - - 1.49 - - - -5.44 - - - - -5.36 - - - - - - - - - - - - -
- - - 4.52 - 2.47 3.75 - - - - - - - - - 2.6 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- 2.5 1.44 0.59 1.44 3.12 4.03 1.97 2.11 -4.89 - - - - -7.17 -3.7 0.1 -2.54 - -2.47 -3.98 -3.91 - -4.3 -4.8 -1.29 - - - -8.22 - - - - - - - - - - - - - - - - - -6.27
- - - 3.22 3.06 - 4.41 1.97 - -2.13 - - -1.61 - -4.29 - -1.29 - - - - - - - - -0.12 - - - -1.33 -2.31 - -2.22 -0.95 - - - - - - - - -1.3 - - -1.32 -0.1 -2.68
- 2.38 -0.92 -2.58 -0.42 1.64 3.0 2.84 1.54 -2.2 - -3.45 -0.72 -0.29 -1.94 1.99 -0.14 -0.85 -0.4 -2.56 -0.74 -1.03 - -2.58 -0.95 0.64 0.52 -4.09 0.98 -1.65 -3.09 -2.38 -2.53 -3.67 0.48 -4.08 -1.19 -2.42 -2.26 -2.19 -2.65 -1.73 -3.23 -4.86 -1.43 -3.16 - -0.79

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.