Heatmap: Cluster_89 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Archegonia (mature)
Antheridia (9 DAI)
Antheridia (small, 11 DAI)
Antheridia (mature, 14-15 DAI)
Antheridia (japan)
Antheridia
Antheridia Reute
Antheridia Gransden
Sperm cell packages
Gametophore
Gametophore (dehydrated)
Gametophore (rehydrated)
Gametophore (hydroponic)
Gametophore+auxin (hydroponic)
Leaflets
Paraphysis
Sporophyte (9 DAF)
Sporophyte (16 DAF)
Sporophyte S1
Sporophyte S2
Sporophyte S3
Sporophyte S4
Sporophyte (10 DPC)
Spore capsule (green)
Spore capsule (green, reute)
Spore capsule (mature)
Spore capsule (mature, reute)
Spores (germinating, continous light)
Protoplast
Protonema
Protonema (liquid culture)
Protonema+aba
Protonema+gametophore
Protonema+gametophore (continous light)
Protonema+gametophore (heat stress)
Protonema+gametophore (high light)
Protonema+gametophore (low light)
Protonema+gametophore+acetone
Protonema+gametophore+gib.acid (continous light)
Protonema+gametophore+glucose (blue light)
Protonema+gametophore+glucose (darkness)
Protonema+gametophore+glucose (far red light)
Protonema+gametophore+glucose (red light)
Protonema+gametophore+glucose (uv-b light)
Protonema+gametophore+jasmonate
Protonema+gametophore+stringolactone
Protonema+glucose (continous light)
Chloronema
-2.14 0.66 0.09 -0.55 -2.33 2.59 1.92 2.43 2.12 -1.1 -1.51 -1.33 -1.97 0.57 -0.95 1.52 -0.09 -0.54 -1.6 -0.26 0.57 0.47 - -1.65 -0.54 -0.2 -1.62 -0.85 -0.07 -0.97 -2.79 -2.37 -2.76 -2.15 0.19 -2.32 -2.64 -1.02 0.33 -1.48 0.01 0.15 -2.33 -1.13 -2.23 -0.88 -3.07 -1.03
- - -0.66 -0.99 0.35 3.22 4.5 2.32 - -0.53 -1.66 - 1.31 -1.37 0.1 - -1.65 0.93 - - - - -0.62 - - - -1.48 - - -2.37 -2.67 - - - - - - - - - - - - - - - - -2.3
- - - - - - 5.58 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
1.86 -1.16 -0.06 -1.82 -0.6 0.53 0.93 0.91 1.62 0.36 -6.52 -5.65 -0.8 -2.17 -0.05 1.66 -0.47 -1.51 0.01 -0.67 -0.17 -0.49 -2.77 0.5 -1.3 -3.37 -2.93 1.1 0.59 -0.22 0.56 -0.5 0.46 0.68 -1.51 0.7 0.87 -0.4 -0.46 -0.9 -2.72 -2.82 -0.91 -0.21 -0.38 -0.33 0.74 -0.79
- - 1.48 - 0.1 - 4.15 - 1.97 2.22 - - 0.76 - -1.08 - - - - - - - - - - 2.88 - - - - - 0.9 - - - - - - - - - - 1.57 1.79 - - - -
- - - - - - 5.58 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- -0.79 -1.68 1.43 -0.05 1.74 1.83 0.8 2.54 0.01 -1.53 -0.99 -0.84 -2.67 -0.4 -1.39 -1.07 0.0 -2.86 0.45 -1.32 -0.81 - -2.47 1.0 -1.21 1.72 0.3 -1.04 -0.35 -0.12 0.68 0.08 -0.52 -0.76 -0.95 0.08 0.54 -2.65 -1.32 -0.4 -0.97 0.03 -0.91 -2.42 -1.41 -3.25 -0.07
1.04 -1.01 0.01 2.02 2.12 1.73 2.46 2.71 2.37 -1.23 - - -1.33 -2.06 -1.26 1.31 -1.14 -1.64 -0.74 -2.72 -2.68 -1.5 -1.16 -3.0 -2.28 -1.1 1.45 -3.55 -2.18 -2.6 -0.08 -2.68 -3.13 -2.93 -6.48 -4.45 -4.29 -1.34 -4.63 -3.23 -0.12 -0.22 -1.1 -2.55 -5.55 -1.57 -3.42 -2.42
- - - - - 1.97 5.0 - - - - - - - - 1.71 1.46 - - - - - - - - 2.59 - - - - - - - - - - - - - - - - - - - - - -
- - -0.8 1.37 1.36 2.57 2.95 0.88 2.87 -3.05 - - - - -3.02 -0.17 0.27 0.54 - - 0.45 -0.03 - -0.13 0.24 1.31 -1.71 -0.63 - -1.22 0.32 -0.37 -1.21 - - -0.58 -0.25 -1.35 - -0.98 - - -0.66 - -1.79 0.18 -1.69 -3.21
- - - - - - 5.58 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- 0.97 - - 0.64 3.56 2.32 1.95 3.01 - - - - - -5.74 -1.9 -2.15 -0.5 - - - 0.78 - 2.31 1.04 -0.88 0.94 - - - - - - - - - - - - - - - - 1.64 - - -2.13 -
- - - 2.78 - - 5.36 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
1.16 -0.12 -2.45 -3.88 2.32 1.33 2.09 1.84 2.57 -1.21 -5.95 -4.07 -1.7 -1.62 -1.64 1.52 -4.22 -7.87 -2.24 -4.76 -2.54 -2.92 -2.49 - -4.09 -3.59 - 0.74 -0.07 -0.8 0.81 -1.58 -0.49 0.12 -0.68 -1.17 0.23 0.18 0.19 -0.83 -2.35 -2.56 0.45 -0.23 -0.78 -0.18 0.26 -0.64
-1.19 -1.11 -1.45 -5.33 -1.42 1.74 1.67 1.51 0.13 0.28 -2.42 -1.78 -1.0 -1.84 0.29 -0.32 -1.62 -2.79 -4.92 -1.56 -1.26 -0.13 -3.64 -2.53 -2.87 -1.06 -2.2 1.53 0.97 0.44 0.78 -0.93 0.58 0.92 -0.38 1.05 0.26 1.14 -0.82 0.19 -3.0 -2.94 0.2 0.74 -0.21 1.23 -0.01 0.1
- - - - - 3.13 2.93 1.03 3.56 - - -0.29 - - - 2.5 - - - - - - - - -0.51 - - - -0.55 -1.63 0.15 -0.16 - - - - - 0.87 - 0.38 - - -0.13 -0.41 - - 0.07 0.77
2.95 1.84 1.79 -0.61 1.2 1.22 1.88 -0.58 3.31 - - - - - - 2.76 1.34 -1.04 - - -0.6 -0.92 - -0.85 -1.75 0.36 - - - - - - -2.97 -2.27 - - - -1.85 - - - - - - - - - -
- - - - -0.25 3.3 4.69 2.2 - - 0.87 - - - -3.24 - - - - - - - - - - - - 1.01 - -2.93 - - - - - - - - - - - - - - - - - 1.5
- - - - - - 5.02 - - - - - - - - - - - - - - - - - 3.97 - - - - - - - - - - - - - - - - - - - - - - -
- - - - - - 5.58 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - - 3.72 4.83 - - - - - 2.65 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-1.26 -0.4 -3.43 2.31 0.06 1.15 3.74 1.99 3.17 - - - -4.16 - -3.07 0.45 -0.51 -4.43 - -1.7 -1.89 - - -2.59 - -1.43 - - -3.9 -2.37 -4.86 -3.87 - - - -3.86 - -3.31 - -2.34 1.52 1.98 -1.11 -2.01 -3.28 -1.72 - -3.08
- -1.4 -0.6 - - 0.04 4.03 3.32 - 1.26 - -1.42 -0.44 - 0.07 - - -1.43 0.8 - - -1.53 -0.34 - 0.82 -1.07 0.07 1.3 -2.24 -0.72 - - -1.36 0.0 - -0.1 -1.72 0.16 -1.59 - - - - -1.84 -2.35 - -2.57 -1.06
-1.95 - 0.52 -2.56 -1.11 2.75 3.8 2.5 1.05 - 2.39 2.76 - - - - - -1.11 - - - - 0.42 -1.0 - - -1.16 -1.85 -0.96 -3.52 -3.14 - - - 0.27 - - - - - - - - - -2.03 - - -3.75
-0.32 -3.2 -4.03 -3.1 0.92 0.98 1.01 0.39 -0.03 0.66 -3.19 -3.32 -0.42 0.51 0.14 -1.63 -1.28 -3.76 0.49 -0.86 -2.58 -4.17 -0.41 -1.82 -3.63 -3.0 -5.66 1.23 1.11 0.42 0.48 0.4 0.37 0.63 0.28 -0.36 0.3 0.77 -0.37 0.53 0.12 0.46 0.52 0.38 0.37 0.88 -0.36 0.84
- - - - -0.21 2.85 4.99 3.02 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
1.12 -0.64 1.18 1.08 -1.25 2.28 2.12 2.38 1.82 -1.02 1.92 0.89 -2.93 -1.4 -2.56 0.6 -0.92 -1.76 -0.78 -1.86 -0.96 -3.21 -1.17 -1.33 -0.45 -0.76 0.05 -0.53 -0.01 -1.08 -1.59 0.28 -4.65 -2.0 0.22 -1.4 -2.12 -1.29 - -0.54 -1.28 -4.0 -1.19 -1.9 -3.41 -2.37 -3.15 -2.79
- 2.56 2.41 1.69 - 1.27 4.31 2.46 - - - - - - -5.95 0.77 1.33 - - - - - - -1.82 - 0.15 - - - -3.59 - - -2.87 - - - - - - - - - - - - - - -
1.27 0.36 1.23 -0.44 -0.15 2.73 0.99 3.47 2.24 -1.09 -3.81 -3.81 -2.63 -2.98 -1.66 - 0.58 -0.29 - -1.85 -0.68 -3.22 -1.18 1.31 -3.65 0.06 - -1.76 -1.06 -1.53 -1.34 0.24 -2.04 -2.11 -4.62 -0.94 -1.46 -0.79 -2.11 -1.07 -1.6 -3.01 -2.12 -1.78 - -2.36 -0.82 -2.36
- - - - - - 5.14 3.67 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-1.32 - 0.22 2.28 -1.63 1.98 2.58 0.63 2.27 -0.73 1.08 2.03 -0.21 0.54 -0.13 - -0.31 0.11 -2.12 -0.17 -2.94 -0.59 0.2 - -0.21 0.94 0.32 -2.84 -0.77 -1.15 -3.86 -1.87 - -3.61 -1.56 -1.98 -3.33 -3.38 - - - -0.25 -1.88 -1.06 -1.16 -0.29 -2.18 -1.06
- - 2.17 2.44 - - 3.09 2.72 4.0 -1.09 - - - - - 1.82 - -0.47 - - - - - - - - - - - -3.4 - - - - - - - - - - - -0.15 -0.49 - -0.72 - - -
-0.12 2.49 1.81 0.58 0.84 - 2.63 3.17 2.65 - - - -1.56 - -3.84 0.81 1.38 -1.57 - - - -0.61 2.21 - - -0.55 - - - -2.45 -1.87 - - - - - - - - - - -0.85 - - - - -1.13 -0.66
- - 0.61 1.37 2.23 2.77 4.24 3.09 - - - -1.95 -1.33 - -5.8 -1.16 -0.54 - - - - - - 0.92 -1.59 -1.48 - - -2.21 -3.33 - - - - - - - -1.8 - - - - - - - - - -
- - - 3.82 1.29 1.87 3.85 2.49 0.84 - - - - - - - - -1.64 - - -0.61 - - 0.9 0.79 - - - -1.47 - - - - - - - - -1.06 - - - - - - - - -0.86 -
- - - - - - 5.58 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - - - 5.58 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - -2.62 -1.6 -1.36 0.94 0.94 3.29 3.45 -3.44 - - - -1.99 -2.0 - 2.55 -1.27 0.98 1.54 0.68 0.58 - - -2.07 0.78 - - -1.51 -3.63 -3.29 - -1.98 -1.93 -0.98 - - -0.62 -0.6 -1.4 - - -1.85 -2.56 -2.52 -1.03 0.0 -1.31
- - 1.16 - -1.93 -0.21 3.11 - 3.57 -2.13 - -0.29 - - -4.23 3.34 1.71 - - - - -0.45 - -0.38 - 0.85 -1.24 -0.69 1.09 0.06 - - - -0.62 - - - - - -0.46 -0.46 - - - - - - -
2.23 -2.01 -2.01 -2.58 1.4 2.54 2.18 3.04 2.94 -1.56 -4.42 -1.68 -1.06 -2.14 -1.12 2.81 0.01 -1.08 -1.58 - - -1.81 -2.88 -1.31 -2.34 -2.72 -4.25 -3.88 -4.84 -3.37 -4.9 - - -2.79 -4.6 - - -1.18 - - -3.92 - -3.2 -3.71 -2.26 -1.47 -4.23 -3.36
- - 2.39 -0.85 1.74 2.6 2.96 3.15 3.27 -0.28 - -0.76 - - -2.05 - -0.5 - - - - - - - - 2.02 - - - -3.48 - - - - - - - - - - - - - - - - - -
- - - - - 4.04 4.54 - - - - - - - - - - - - - - - - - 2.91 - - - - -0.38 - - - - - - - - - - - - - - - - - -
- - - - - - 5.58 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - 2.42 0.81 -1.4 2.12 1.82 2.15 2.63 -1.22 -0.0 1.32 -2.94 -2.83 -1.94 - -0.27 0.19 - -1.27 - -2.9 -0.8 -3.16 -2.42 0.92 -0.64 0.85 1.74 -0.71 -0.3 -2.44 -2.05 0.18 -0.94 -1.77 -2.25 -2.04 - -3.51 - -3.06 -2.19 -0.63 -3.32 -0.88 -3.22 -1.22
- - - - 3.13 4.15 4.42 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - 0.23 - - -0.82 3.89 1.68 2.85 - 0.66 1.96 - - -2.9 1.33 0.17 - - - - - - - 1.57 - -1.43 1.08 - -1.14 -2.5 -2.26 -2.67 - - -0.2 - - - - 1.22 0.21 -0.52 -2.05 - - - -
- - - - 3.84 - 5.08 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - 2.53 3.33 4.44 3.32 - - - - - - - - - - - - - - - - -1.22 - - - - -3.29 - - - - - - - - - - - - - - - - - -
-2.25 -2.1 -2.4 3.37 0.36 1.73 1.73 3.58 3.58 - -2.51 - - - -3.18 -1.8 - - - -1.37 - - 0.3 0.71 -0.89 -2.42 - - -1.73 - - - - - -2.73 - - - - - - - - - - - -2.03 -
2.94 0.18 -0.77 - 0.32 1.51 2.81 2.32 3.32 -1.44 - - -3.21 -1.92 -1.46 3.1 -0.99 - - - -4.79 - - - - -3.46 - -2.79 - -2.61 -3.87 - -2.59 -4.28 -4.85 -4.64 - -2.11 - -3.12 -3.58 -3.47 -2.89 -2.5 -2.06 -1.97 -3.28 -2.31
- - - 2.47 -0.05 2.7 3.44 2.77 4.09 - - - - - - - - -1.91 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - 0.81 - 0.7 1.72 1.58 2.48 2.8 - -0.26 2.91 - - -3.81 - 1.21 1.03 0.99 -0.0 1.08 - - 2.32 - -0.25 - - - -3.35 - -0.29 - -0.49 - - - - - - - - - - - - - -1.11
- - - 0.4 - 3.77 3.19 - 3.24 -0.61 - - - - -1.76 - 0.65 0.97 - - - - - 1.13 0.76 0.64 - - 0.13 - -0.46 - - - - 0.54 - - - - - - - - - - - 0.36
- - 2.08 - - - 4.79 - - - - - - - - - 2.55 - - - - - - 2.27 0.7 1.09 - - - -0.99 - - 0.18 - - - - - - - - - - - - - - -
-2.79 1.06 -1.43 -0.81 2.62 1.61 2.75 2.68 2.71 -1.34 -4.24 -4.2 -1.93 -2.63 -1.34 2.74 -0.76 -3.37 -0.35 -2.87 -2.57 -0.63 -2.61 -5.22 -0.6 -1.27 -3.55 -2.75 -3.18 -2.62 -2.38 -4.25 -2.62 -0.31 -2.92 -1.92 -2.04 -4.09 -3.88 -3.11 -3.69 -4.02 -1.95 -1.3 -4.12 -3.02 -2.5 -1.15
- - - - - - 5.58 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - 1.48 1.72 -0.21 2.62 1.54 3.27 2.98 -3.21 0.83 0.6 - - -3.6 -1.66 -0.32 -2.37 - -1.23 - - 0.17 -0.31 -0.91 0.12 -2.2 - 1.83 -2.9 -2.53 -2.55 -2.27 - - - -0.97 - -0.71 - - - - - - - - -3.11
- - - 2.16 2.01 - 3.77 2.99 3.79 - - - - - -2.22 - 1.47 - - - - - - - - 0.19 - - - - - - - - - - - - - - - - - - - - - -
- - - - 2.32 4.28 4.56 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - 3.63 2.29 - 4.64 2.54 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-0.16 -0.49 -1.11 -0.98 1.16 1.3 1.3 1.17 1.03 0.23 -1.88 -2.16 -0.26 -0.42 -0.28 0.4 -0.69 -3.47 -0.8 -1.04 -0.81 -0.95 -2.78 -1.02 -2.42 -2.88 -3.3 0.62 0.07 0.2 0.04 -0.52 0.68 0.85 -1.6 0.51 0.37 0.0 0.05 0.35 -0.52 -0.15 0.73 0.49 0.69 0.04 -0.09 0.25
- - 0.6 -3.17 0.61 1.78 3.33 0.38 1.97 -2.87 -1.34 -1.34 -0.96 - -2.45 3.92 -1.71 -3.0 -1.76 -0.72 -0.03 - -1.98 1.62 -1.54 -0.68 0.64 - -1.59 -4.16 -3.43 - -3.94 - - - - -2.47 - - - - - -2.39 - -3.01 -2.81 -3.48
- - - 2.4 - - 4.87 - 2.63 - - - - - - 2.87 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
1.5 - - 3.03 -0.05 1.72 3.78 0.84 3.84 - - - -0.93 - - - -0.15 - - - - - - - - 0.56 - - - - - - - - - - - - - - - - - - - - - -
0.31 -2.3 -1.84 -4.82 3.29 2.13 2.41 1.9 3.48 -0.97 -5.36 -5.99 -1.87 -3.35 -0.93 2.66 -3.28 -4.47 -0.52 -2.83 -4.49 -3.6 -2.01 -6.01 -7.13 -2.66 -6.26 -6.14 -6.77 -4.07 -3.07 -8.1 -5.69 -6.99 -8.25 -5.18 -5.91 -1.93 -5.63 -1.96 -6.57 -4.55 -0.35 -1.34 -4.53 -1.94 -3.11 -4.13
- - - 2.96 - 1.88 4.49 - - - - - - - - - 2.15 - - - - - - 2.02 - 2.49 - - - - - - - - - - - - - - - - - - - - - -
-2.42 -0.96 -1.49 -3.97 -1.16 3.16 2.27 3.12 3.24 -1.1 -1.92 -2.7 -3.86 -2.25 -1.79 2.22 0.22 -1.18 - -0.08 -1.1 -0.92 -0.18 -3.42 -1.57 -1.83 -3.37 - -1.68 -2.39 -2.41 - - -3.19 - - - -0.92 - - - - -1.12 -0.98 -3.44 -1.24 -1.76 -4.92
1.27 1.52 2.59 1.37 0.0 2.14 1.58 1.71 1.57 -0.63 -1.94 -1.96 -0.76 -1.47 0.38 -0.41 0.49 -0.23 0.54 -1.42 -1.94 -1.42 -1.24 -0.74 -1.11 0.44 -0.94 -2.98 -1.37 -0.8 -1.31 -2.33 -2.15 -2.7 -2.16 -1.84 -2.36 -1.19 -3.36 -0.48 -1.3 -0.71 -1.15 -2.22 -2.92 -1.86 -3.39 0.0
- - - - - - 5.1 - - - - - - - - - 2.12 - - - - - - - 1.63 - 1.74 - 1.59 - - - - - - - - - - - - - - - - - - -
- 3.65 - 2.76 1.16 - 3.43 - 3.7 - - - - - - - 0.63 - - - - - - - - 0.17 - - - - - - - - - - - - - - - - - - - - - -
- - - - - - 5.58 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- 1.78 - - -1.17 3.07 4.02 0.08 -1.19 -2.24 - - - - -3.06 2.22 1.81 - - - - -0.95 - -0.96 1.0 1.79 1.4 - -1.5 - - - - - - - - - - - - - - - - - - -
- - - 0.92 0.55 2.18 4.09 2.79 - - - - -0.14 - -4.0 - 0.02 -1.03 - - - - - - - - - 0.9 0.38 -3.34 -1.46 - -0.46 - -1.25 0.06 - 0.54 - -1.14 - - - - - 2.21 -0.84 -0.34
- - - -2.05 1.52 3.19 4.65 3.2 - - - - - - - - -0.08 - - - - - - - - -0.88 - - - - - - - - - - - - - - - - - - - - - -
- - - - - - 5.58 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - -1.54 - 3.18 2.31 1.61 2.23 3.05 -1.24 - - -2.4 -3.39 -2.39 3.66 -0.79 -2.0 - - - - -1.99 -3.27 - -0.56 - -3.3 - -3.24 -1.27 -3.7 -4.46 - - - - -1.29 - -1.44 - - - - - -0.77 -3.33 -
- - - 2.53 1.04 1.94 3.49 2.13 3.92 - - - - - -1.02 - 0.7 -1.14 - - -0.22 0.57 - - - -0.55 - - - - - - - - - - - - - - - - - - - - - -
- - - 0.08 - 3.87 2.85 3.43 3.41 - - - - - - - - - - - - - - - - - -0.04 - 0.18 -1.65 - - - - - - - - - - - 0.4 - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.