Heatmap: Cluster_61 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Image
Gene
Archegonia (mature)
Antheridia (9 DAI)
Antheridia (small, 11 DAI)
Antheridia (mature, 14-15 DAI)
Antheridia (japan)
Antheridia
Antheridia Reute
Antheridia Gransden
Sperm cell packages
Gametophore
Gametophore (dehydrated)
Gametophore (rehydrated)
Gametophore (hydroponic)
Gametophore+auxin (hydroponic)
Leaflets
Paraphysis
Sporophyte (9 DAF)
Sporophyte (16 DAF)
Sporophyte S1
Sporophyte S2
Sporophyte S3
Sporophyte S4
Sporophyte (10 DPC)
Spore capsule (green)
Spore capsule (green, reute)
Spore capsule (mature)
Spore capsule (mature, reute)
Spores (germinating, continous light)
Protoplast
Protonema
Protonema (liquid culture)
Protonema+aba
Protonema+gametophore
Protonema+gametophore (continous light)
Protonema+gametophore (heat stress)
Protonema+gametophore (high light)
Protonema+gametophore (low light)
Protonema+gametophore+acetone
Protonema+gametophore+gib.acid (continous light)
Protonema+gametophore+glucose (blue light)
Protonema+gametophore+glucose (darkness)
Protonema+gametophore+glucose (far red light)
Protonema+gametophore+glucose (red light)
Protonema+gametophore+glucose (uv-b light)
Protonema+gametophore+jasmonate
Protonema+gametophore+stringolactone
Protonema+glucose (continous light)
Chloronema
1.7 1.05 2.83 -1.25 2.33 1.17 1.6 1.08 2.18 -2.19 -1.95 -2.66 -2.45 -4.42 -2.77 3.11 -1.07 -7.12 -0.42 -2.32 -2.36 -2.79 -1.0 -7.29 -3.36 -4.14 -8.24 - -3.14 -1.99 -0.99 -1.66 -2.16 -3.21 - -5.88 -3.9 -0.74 -2.98 -0.97 - -4.72 0.05 -1.09 -1.48 -0.54 -0.6 -5.74
- 1.81 3.0 - - - - - 2.9 - - - - - - - 3.99 - - - - - - - - 3.71 - - - - - - - - - - - - - - - - - - - - - -
- - 3.81 - - - - - - - - - - - - 3.97 3.02 - - - - - - - - 3.35 - - - - - - - - - - - - - - - - - - - - - -
- 0.39 -0.55 0.03 2.85 3.04 2.3 2.5 0.31 -0.63 -4.58 -4.34 -0.03 -0.09 -0.62 -3.33 0.02 1.65 -1.38 -0.2 -2.87 -4.3 -2.05 -3.88 -0.21 0.15 -1.29 -3.59 -5.68 -2.43 -2.16 -4.81 -3.1 -2.7 -4.57 - -3.62 -0.74 - -1.05 0.39 -0.49 -1.49 -1.23 -3.12 -0.84 -2.99 -1.35
- - 2.54 - - - - 2.66 - - - - - - - 4.95 2.3 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-1.29 0.65 2.81 -0.69 -2.95 0.21 -0.32 2.68 1.48 -0.09 -4.63 - -2.08 -1.65 -1.82 1.81 1.19 1.09 0.31 0.99 -0.53 0.09 1.15 -0.09 -1.57 -0.76 -1.15 -1.45 -0.81 -1.21 -2.41 -1.67 -3.44 -1.82 -2.52 -2.59 -2.7 0.69 -3.0 -3.45 -1.35 -3.63 -2.8 -3.8 -4.87 0.66 -2.11 -0.51
0.09 -0.47 -1.38 -2.87 1.46 1.56 1.43 1.31 -0.18 -0.29 -1.29 -1.53 -1.41 -1.65 -0.89 0.78 -0.55 -3.35 -0.46 -1.7 -2.39 -4.39 -0.37 -3.21 -3.97 -3.41 -5.26 1.61 1.08 0.55 0.73 -0.98 -0.95 0.56 -0.41 -2.26 -1.02 1.58 -0.46 0.01 -0.79 -1.11 0.26 0.6 -1.14 1.64 0.48 -0.61
-0.29 -0.53 -1.1 -6.73 1.43 1.8 1.91 1.52 -0.92 -0.46 -4.41 -6.02 -1.83 -3.67 -0.91 2.44 -0.07 -0.78 0.96 0.75 -0.48 -0.92 -0.55 -2.35 -2.42 -4.02 -7.91 0.9 -1.49 0.0 0.46 -1.33 -0.13 -0.26 -2.18 -1.39 0.16 0.68 -0.86 -0.05 -2.68 -2.16 -0.1 0.4 -0.55 0.68 0.38 -2.1
- - 3.61 3.61 1.35 - 1.58 2.54 - - - - - - - 3.04 - 0.74 - - - - - - - 0.42 - - -0.09 - - - - - - - - - - - - - - - - - - -
4.23 -0.49 3.71 0.89 -0.44 - - - - - - - - - - - 2.41 -0.34 - - - - - -0.05 - 2.54 - - - - - - - - - - - - - - - - - - - - - -
- - 3.97 - - - - - - - - - - - -2.44 - - 2.1 - - - - - 2.94 - 4.34 - - - - - - - - - - - - - - - - - - - - - -
0.88 0.29 2.49 -2.34 -1.78 0.37 -0.47 1.57 - 0.27 -3.45 - 0.03 -1.08 0.27 0.12 2.6 1.86 -1.6 0.25 -0.54 0.21 - -0.47 0.8 3.08 -0.06 -2.65 - -1.91 -1.25 -3.53 -3.22 -4.73 -2.56 - -3.1 -1.14 - -1.5 -2.0 -2.29 -2.15 -2.29 - -1.31 -3.31 -1.85
0.32 1.39 2.44 1.85 1.33 - - - 2.23 - - - - - -2.84 2.83 2.57 0.72 - - - - - - - 3.71 - - - - - - - - - - - - - - - - - - - - - -
- - -0.83 0.8 -1.88 0.31 2.5 2.6 1.59 -2.98 -2.73 - 0.23 -2.58 -3.31 4.11 0.24 1.01 - -0.3 0.49 0.58 - -0.31 - -1.66 - -1.01 -2.1 -1.9 -3.88 -1.96 -2.74 - - - - -2.68 -2.19 -2.96 - - - -1.42 - - - -2.82
-0.47 0.68 1.65 - -2.56 1.29 1.45 1.49 -0.79 -1.77 -2.3 -1.52 -2.14 -1.85 -1.58 2.46 1.03 1.53 0.84 0.98 0.99 -0.68 1.94 -0.6 -0.34 1.26 -0.42 -1.25 -3.36 -1.27 -1.28 -0.83 -1.65 -1.98 -2.95 -2.11 -1.74 -1.6 -2.35 -1.32 -1.04 -1.34 -2.12 -2.1 -2.54 -1.34 -1.69 -0.75
0.94 - - - -0.46 2.0 1.38 2.92 - -2.62 - - - -2.85 -2.38 4.77 0.12 -0.5 - - -2.07 -2.0 -3.69 -4.6 -2.62 -1.5 -1.75 - - - - - - - - - - -3.43 - - - - -4.22 - - - - -
- 0.78 2.73 1.62 -0.68 0.75 1.86 0.9 - -0.16 -2.18 -1.36 -1.97 -1.63 -1.81 2.38 1.17 -1.19 1.62 0.8 0.3 0.2 -0.53 -1.52 0.24 -0.99 1.54 -1.91 -2.83 -1.16 -2.76 -0.61 -4.12 - -4.43 -1.95 -3.56 -0.54 - -2.33 -1.42 -1.4 -2.67 -1.52 -4.49 -0.52 -2.05 -1.22
- 1.98 3.09 -0.21 - - - - - -1.11 2.07 -0.04 -1.78 - -4.11 3.56 0.3 0.54 - - - 1.25 - - -0.85 -1.37 -0.74 0.38 2.2 -2.03 - - -1.79 -1.52 - - -0.77 - - - 0.04 - -1.47 -1.75 - -0.99 - -0.51
-6.13 1.43 -0.2 0.56 2.13 1.88 1.6 1.22 -0.53 -2.71 -1.04 -1.02 -3.08 -7.61 -2.02 -6.18 -2.34 2.58 -2.47 -3.51 -3.61 -3.74 -2.79 0.52 1.03 -4.34 -2.87 0.09 2.93 -1.87 -1.95 -4.29 -0.99 -0.36 -0.09 -1.87 -0.42 -3.15 -1.33 -1.33 -1.38 -1.72 -1.22 -0.22 -0.71 -4.05 -1.88 -0.87
- 1.94 2.12 1.01 0.62 2.15 2.02 2.36 -1.62 -2.19 -0.31 0.73 -3.83 - -4.87 3.49 0.56 0.51 - -3.26 - 0.54 - -0.81 -0.35 -0.08 -2.55 - - -4.71 -2.52 -3.54 -2.16 -2.65 - -3.53 - -3.52 - -2.01 - - - - -2.3 -3.54 - -
1.08 -0.89 -1.22 -4.36 -1.24 1.73 1.76 1.47 0.68 -0.11 -5.07 -4.94 -0.6 -1.58 -0.63 2.04 1.57 -1.15 -0.1 -0.35 -1.32 -1.48 - -2.24 -2.54 -2.22 -6.34 0.92 0.27 0.46 0.44 -2.62 -0.22 -0.42 -0.74 -1.1 0.42 0.36 -1.27 0.57 -0.51 -1.12 0.38 0.09 -0.39 0.17 0.21 -1.53
- - 3.17 -2.04 -2.19 1.12 2.51 0.94 - - 1.47 2.2 - - - 3.87 0.08 - - - - - - 0.57 - 1.8 - - - - - - -3.09 - - - - - - - - - - - - - -0.74 -
-0.61 -0.71 2.69 2.72 -2.22 0.12 -0.8 1.01 1.53 -2.97 -3.31 -3.71 - -4.09 -4.43 2.73 0.16 1.25 0.68 -0.61 -0.32 -1.84 -2.34 -0.74 -0.77 -0.4 -0.81 1.53 0.24 -0.68 -0.86 -1.28 -2.16 -0.27 -1.88 -1.3 -0.63 -1.94 -2.12 -3.14 -2.87 -4.05 -3.95 -0.93 -2.29 -1.95 -1.68 -2.99
- - 4.02 - - - - - - - - - - - - - 3.98 - - - - - - - - 4.0 - - - - - - - - - - - - - - - - - - - - - -
-0.18 1.7 3.7 0.54 - - - - - - - - - - -6.09 4.42 2.27 - - - - - - -2.85 - 1.59 - - - -6.17 - - - - - - - - - - - - - - - - - -
- - 3.9 - - - - - - - - - - - - 5.05 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - 1.22 - 0.97 2.33 2.04 2.99 -3.56 -2.19 - - -3.04 -4.17 -1.89 4.21 0.48 - 1.86 -0.77 -0.89 -1.92 - - - -1.98 - - - -4.44 -3.16 - - - - - - -2.67 - - - - -2.72 -4.74 - -2.89 -4.26 -5.84
-2.73 -1.51 2.37 -2.67 - 2.67 2.07 - -1.11 -1.79 - - -0.75 -2.74 -1.98 3.73 1.98 0.57 -0.62 -0.39 - -1.74 - - -1.67 -0.97 - -0.93 -1.2 -1.12 -1.96 -3.05 -3.42 -1.52 -2.59 - -2.61 -0.48 - -0.15 - -2.71 -2.38 0.81 - -0.75 -0.04 -0.37
0.22 - -0.08 -0.59 1.32 3.11 1.61 1.9 - 0.41 -0.49 -2.7 0.88 0.54 -1.58 - -1.07 2.59 - -1.98 -1.1 - - -1.12 1.79 1.18 0.5 -0.23 -1.59 -2.75 -0.58 -1.57 -1.56 -2.59 - -0.62 -1.38 0.01 -1.87 - - -2.21 -2.12 - - -0.62 -2.06 -2.89
- - 3.18 1.81 - - - - - - - - - - - - 3.95 2.06 - - - - - - - 3.96 - - - -2.02 - - - - - - - - - - - - - - - - - -
- - 3.84 0.58 -1.59 - - - - - - - - - -4.64 4.48 2.42 -1.6 - - - - - - - 1.94 - - - - - - - - - - - - - - - - - - - - - -
- 1.63 -0.79 - 1.85 3.23 2.49 2.62 -1.86 -1.4 - - -2.6 - 0.01 3.65 1.59 - -0.35 -1.23 - - - - - -0.57 - - - - - - - - - - -3.17 -2.65 - -3.38 - - - - - - - -
- - 4.61 - - - - - - - - - - - - - - - - - - - - - - 4.56 - - - - - - - - - - - - - - - - - - - - - -
-0.41 -0.39 0.25 -1.12 2.67 2.81 2.63 2.4 0.28 -1.31 -6.59 -6.8 -1.66 -2.5 -2.96 0.37 -2.55 2.73 -2.3 -3.92 -3.67 -2.96 -2.54 1.98 -0.15 -1.98 - -1.98 -7.64 -3.11 -3.34 -5.37 -3.43 -3.24 -6.69 -4.95 -2.94 -1.92 -3.31 -2.0 -2.27 -1.55 -0.64 -2.02 -2.59 -1.52 -1.73 -2.96
1.79 0.19 2.35 2.31 1.95 1.61 0.94 2.08 0.74 -1.79 -4.91 - -1.0 1.53 -2.37 3.01 1.1 -1.14 - -2.7 - -4.92 -0.8 -1.63 -4.1 0.08 - - - -2.96 -2.03 - -4.29 - - -5.06 - -3.95 - - -1.37 -1.24 -1.88 - -5.29 -3.05 - -3.94
-0.31 0.32 -1.39 -3.71 2.41 3.36 2.17 2.07 -0.28 -1.66 -7.18 - -2.28 -4.04 -1.76 3.52 -3.7 2.54 - -3.89 -3.81 -3.1 - - -1.06 -2.54 -0.02 - -7.23 -8.2 -7.33 - - - - - - -5.39 - -5.96 - - -4.04 -4.45 - -5.41 -5.4 -
-1.04 0.37 1.85 -2.42 0.23 1.66 2.26 2.68 1.91 -1.2 - - -1.97 -2.33 -5.02 4.02 0.35 0.25 -1.73 -1.22 -1.06 -1.79 -2.09 -4.25 -2.8 -0.97 - - - -6.57 -5.77 - - -6.9 - -5.46 -5.36 -1.15 - -6.35 - - -4.79 -4.33 - -1.21 -4.66 -
-0.63 - -5.5 -2.48 2.49 2.42 2.13 2.74 -0.07 -0.37 - - -1.59 -3.19 -0.35 4.13 - -3.08 -2.66 -0.56 -1.36 -3.06 - - -4.62 -4.82 -4.74 -4.64 -1.17 -2.53 -1.64 -3.05 -1.94 -4.14 -5.09 -4.34 -2.82 -2.87 - -2.3 -4.41 - -2.24 -3.24 -3.15 -1.77 -3.13 -2.31
- - - - - - - - - -0.09 - - - - - - - 4.17 - - - - - - 1.04 - - - 4.24 - 0.27 - -0.18 - 2.48 - - - - - - - - - - - - -0.95
4.3 - 3.57 -4.05 -4.69 - -3.38 - - - - -2.41 - - -6.7 3.77 0.77 -3.71 - - -3.38 - - -3.14 - -1.55 - - - - - - - - - - - - - - - - - - - - - -
- 2.68 1.79 - -2.3 -1.25 -0.18 0.27 - 0.31 -1.93 -3.39 0.11 -0.14 -0.38 2.58 1.04 1.8 1.08 0.84 -0.31 -0.58 - 1.39 -0.5 -1.25 -2.66 -1.03 -1.99 -0.62 -1.7 -2.91 -2.15 -1.87 -4.03 -1.24 -2.8 0.37 -2.14 -0.24 -1.42 -1.34 -0.73 0.36 -1.27 -0.1 -0.59 -2.21
- 2.92 3.45 1.49 -0.34 - - - - - - - - - -2.36 - 2.67 1.06 - - - - - - - 4.11 - - - - - - - - - - - - - - - - - - - - - -
- - 4.27 1.65 - - - - - - - - - - - - 2.4 - - - - - - - - 4.34 - - - - - - - - - - - - - - - - - - - - - -
1.3 0.56 2.04 - - -0.84 1.29 0.13 1.98 - -1.69 - - -1.68 - 3.35 2.36 1.03 - - - - - 0.76 - 3.5 -1.1 - - -1.82 - - - - - - - - - - - - - - - - - -3.45
- - 1.95 - - 1.28 0.15 0.45 - -1.96 0.86 -0.55 -1.12 -1.63 -4.66 3.99 0.31 2.67 -1.66 1.11 -1.53 0.26 0.21 2.38 -1.92 -0.8 - - - -6.0 - - - - - - - - - -0.85 - - - -3.2 -3.16 -2.44 - -
- 2.02 1.64 1.01 -0.92 -0.59 -1.94 1.97 2.59 -3.62 - - -3.47 - -4.15 3.47 1.22 1.1 -0.32 - - - - 2.84 0.12 1.37 - - - - - - - - - - - - - - - - - - - - - -
- - 4.39 2.2 - - - - - - - - - - - 4.07 1.44 - - - - - - - - 1.53 - - - - - - - - - - - - - - - - - - - - - -
- 2.32 3.52 - - 2.8 2.3 3.5 - - - - - - - - - - - - - - - - - 3.05 - - - - - - - - - - - - - - - - - - - - - -
2.02 -0.33 -0.5 0.25 2.28 1.6 0.19 0.75 1.94 -1.52 -2.56 -2.99 -2.48 -2.93 -1.72 4.44 - - - - - - -3.44 -3.28 -5.11 -5.74 -4.3 - - -3.91 -1.82 -4.15 -4.11 - - - - -1.33 - -2.02 - -5.89 -0.3 -0.98 -2.77 -1.61 -1.06 -
- 2.17 2.14 -2.6 - -1.6 - 0.52 - - - - -1.66 - -4.94 3.48 1.41 3.39 -2.11 0.23 -0.93 1.25 - 1.98 -0.15 0.77 - - - -5.21 - -1.85 -1.9 -1.94 -3.54 - - -3.36 - -2.85 - - -1.86 - -3.26 -3.36 - -
-0.36 0.29 -0.99 -4.37 2.39 2.32 2.43 2.01 0.06 -2.65 -4.45 -5.49 -2.66 -3.9 -2.49 3.51 -5.19 -4.99 0.46 -4.18 -4.93 -6.11 2.34 -4.44 -8.91 -4.44 - - -3.46 -1.61 -1.37 -2.34 -1.3 -2.76 - -7.33 -3.43 -0.82 -1.35 -1.47 - -4.77 -0.22 -1.51 -0.67 -0.64 -0.99 -4.51
- - 3.76 - - - - - - - - - - - - 5.11 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
2.84 - 3.4 -0.11 -3.79 - - - 2.3 0.01 0.23 0.22 -1.41 -2.68 -2.33 - 0.54 - - - - -2.31 - 0.8 - -0.21 - - -0.69 -1.13 -1.42 1.54 -2.53 - - - -2.78 1.26 -2.15 -1.32 -0.53 -1.49 -2.33 -0.86 - 1.79 -1.63 1.46
- - 3.74 2.28 -0.77 - - 1.42 - - - - - - - 4.32 1.54 - - - - - - 0.69 - 1.07 - - - - - - - - - - - - - - - - - - - - - -
- -1.28 -0.93 - 2.43 2.43 0.94 1.75 -1.09 -0.31 -0.43 - -0.1 - -1.99 3.03 -1.2 0.28 - -2.2 - - -0.92 - - -0.86 - 0.59 -2.51 -0.33 0.08 - 0.17 0.29 -2.64 1.09 0.6 -0.1 -1.79 -0.39 - - -1.04 -0.11 -1.52 -1.47 1.43 -2.41
- 0.44 1.23 -0.65 0.3 1.56 2.07 1.09 0.68 -0.43 -2.36 - -2.81 -1.91 -1.4 3.29 2.06 0.93 - - - -2.36 - 3.08 - 1.04 - - - -2.13 - - - - -2.67 - - 0.07 - -2.59 -1.99 -1.33 -2.07 -2.77 - -1.23 - -2.32
1.12 1.2 2.55 1.43 -1.14 0.69 0.47 1.46 - -0.26 -4.44 -4.73 -2.08 -1.88 -0.77 3.15 0.79 0.65 -3.27 -0.64 -0.33 -0.55 - -0.6 -1.23 0.68 -3.54 -0.28 -0.34 -1.83 -0.6 -0.58 -1.69 -0.8 0.24 -0.5 -1.89 -0.4 -2.21 -2.27 -3.0 -2.62 -2.13 -3.05 -3.06 -0.46 -1.96 -1.39
- -1.41 -3.18 - 0.99 1.92 1.65 1.76 - 0.03 -0.22 - -1.32 -2.01 -2.67 - -1.59 2.47 -0.34 0.76 -0.2 -0.14 - 1.71 0.82 -0.38 1.55 -0.26 -0.45 -1.17 -2.46 -0.38 -2.17 0.04 -0.06 0.3 -1.9 -0.44 -0.92 -0.23 -1.53 -1.34 -0.71 -0.27 -1.01 -0.28 -2.39 0.23
1.67 2.44 3.48 -0.28 -0.79 2.6 1.05 2.59 - - - - - - -3.64 3.19 0.72 -3.12 - - - -2.02 - - -0.41 -0.46 - - - - - - - - - - - - - - - - - - - - - -
1.05 0.84 0.44 -0.13 -1.77 1.18 0.94 0.98 0.49 -0.83 -3.84 -5.73 -1.45 -1.24 -1.47 -0.64 1.99 0.19 0.25 -0.08 -0.0 -0.36 -0.79 -2.59 -1.79 -1.49 -2.79 0.33 0.55 -0.27 -0.03 -1.26 -0.02 0.66 -0.18 -0.49 0.11 0.93 -0.74 -0.16 -1.0 -0.4 -0.33 -0.08 -0.28 1.0 -0.0 -0.68
-2.03 -2.33 -3.21 -2.5 0.19 0.54 0.17 0.46 -2.54 -0.55 -3.64 -3.96 -1.52 -0.98 -1.66 -0.23 1.07 2.75 -0.39 -1.22 -1.2 -0.41 -4.38 -1.51 1.34 -1.72 -0.54 0.9 3.3 -0.24 -0.75 -4.29 -0.69 1.05 1.11 -0.22 -1.64 -2.3 -0.21 -4.14 -2.47 -2.81 -1.74 -2.29 0.09 -2.31 -1.51 0.21
- 0.61 3.23 0.7 - - - - 2.87 - - - - - - 2.23 2.97 -0.29 - - - - - -1.17 -1.09 3.8 - - - - - - - - - - - - - - - - - - - - - -
-0.8 0.17 0.31 -6.44 2.47 1.37 0.96 0.81 0.17 -2.23 -6.39 -7.48 -3.01 -2.09 -2.11 4.27 -2.52 -6.78 -2.22 -1.54 -0.9 -6.26 -2.18 - -8.5 -5.31 - -1.91 -4.09 -0.44 -0.93 -4.17 -0.49 -0.65 - -0.66 -1.3 -1.86 -0.34 -1.49 -3.49 -1.2 -0.22 0.37 -0.21 -1.99 -0.3 -1.47
2.14 -0.45 2.5 1.85 - 0.16 -0.24 -1.29 -1.7 -3.2 -0.23 0.77 -1.44 -0.31 -2.11 3.74 0.75 -0.89 2.3 -3.39 - -2.52 -2.11 -1.26 -1.27 -0.65 -2.18 -2.24 -0.26 -1.2 -3.22 -3.83 -3.0 -2.31 -2.85 -3.67 -2.49 - -2.98 - -3.15 -1.36 -3.23 -2.72 -2.3 -2.41 -1.87 -2.08
-0.95 1.55 3.02 0.85 1.29 - - - -0.77 - - - - - -4.99 3.28 3.26 0.16 - - - - - - - 3.46 - - - -3.06 - - - - - - - - - - - - - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.